Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11835

Experiment: D-Galacturonic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galacturonic Acid (C)
2,935,097	+		CA265_RS11830	0.30	-0.2
2,935,147	-		CA265_RS11830	0.34	+0.6
2,935,162	-		CA265_RS11830	0.35	+0.2
2,935,173	+		CA265_RS11830	0.36	+1.6
2,935,227	-		CA265_RS11830	0.40	+0.2
2,935,248	-		CA265_RS11830	0.41	-1.9
2,935,353	-		CA265_RS11830	0.49	-0.3
2,935,447	+		CA265_RS11830	0.55	+0.7
2,935,448	-		CA265_RS11830	0.56	+0.8
2,935,494	+		CA265_RS11830	0.59	+1.7
2,935,612	+		CA265_RS11830	0.67	+0.3
2,935,624	+		CA265_RS11830	0.68	-0.7
2,935,625	-		CA265_RS11830	0.68	-0.1
2,935,626	+		CA265_RS11830	0.68	+0.2
2,935,644	+		CA265_RS11830	0.70	+0.8
2,935,665	-		CA265_RS11830	0.71	+0.8
2,935,731	+		CA265_RS11830	0.76	+0.5
2,935,750	+		CA265_RS11830	0.77	-0.4
2,935,754	+		CA265_RS11830	0.78	+0.3
2,935,754	+		CA265_RS11830	0.78	-0.3
2,935,754	+		CA265_RS11830	0.78	-0.4
2,935,756	+		CA265_RS11830	0.78	+0.1
2,935,760	+		CA265_RS11830	0.78	-0.1
2,935,760	+		CA265_RS11830	0.78	+1.1
2,935,822	+		CA265_RS11830	0.83	+0.4
2,935,823	-		CA265_RS11830	0.83	+1.1
2,935,856	+		CA265_RS11830	0.85	-0.3
2,935,860	-		CA265_RS11830	0.85	+0.9
2,935,866	-		CA265_RS11830	0.86	+0.3
2,935,874	+		CA265_RS11830	0.86	+0.1
2,935,875	-		CA265_RS11830	0.86	+0.5
2,935,904	-		CA265_RS11830	0.88	+0.1
2,935,921	-		CA265_RS11830	0.90	-0.0
2,935,922	+		CA265_RS11830	0.90	-0.3
2,935,923	-		CA265_RS11830	0.90	-0.3
2,935,980	+				-0.0
2,936,045	+				+0.2
2,936,046	-				-1.9
2,936,153	-				-0.0
2,936,166	-				+0.9
2,936,172	+				-0.1
2,936,173	-				-0.9
2,936,198	-				-0.1
2,936,222	+				+0.0
2,936,231	-				-0.3
2,936,242	+				+0.2
2,936,243	-				-0.7
2,936,279	+				+0.6
2,936,296	+				+2.1
2,936,313	-				+0.2
2,936,328	+				+0.2
2,936,329	-				+0.2
2,936,356	-				+0.2
2,936,356	-				+0.3
2,936,463	+		CA265_RS11835	0.11	-1.7
2,936,572	+		CA265_RS11835	0.14	+0.2
2,936,573	-		CA265_RS11835	0.14	+0.1
2,936,575	-		CA265_RS11835	0.14	+0.5
2,936,621	+		CA265_RS11835	0.15	-0.1
2,936,650	-		CA265_RS11835	0.16	-0.5
2,936,650	-		CA265_RS11835	0.16	+1.4
2,936,689	+		CA265_RS11835	0.17	-0.8
2,936,689	+		CA265_RS11835	0.17	-0.8
2,936,690	-		CA265_RS11835	0.17	-0.4
2,936,690	-		CA265_RS11835	0.17	+0.2
2,936,724	-		CA265_RS11835	0.18	+0.0
2,936,847	-		CA265_RS11835	0.22	-1.5
2,936,879	+		CA265_RS11835	0.23	-0.7
2,936,880	-		CA265_RS11835	0.23	-0.5
2,936,887	+		CA265_RS11835	0.23	-0.7
2,936,891	+		CA265_RS11835	0.23	-0.8
2,936,933	-		CA265_RS11835	0.24	-0.0
2,936,954	-		CA265_RS11835	0.25	-0.2
2,936,968	-		CA265_RS11835	0.25	+0.3
2,936,980	+		CA265_RS11835	0.26	-3.0
2,937,078	+		CA265_RS11835	0.28	-1.6
2,937,078	+		CA265_RS11835	0.28	-1.5
2,937,149	+				-0.7
2,937,171	+		CA265_RS11835	0.31	-0.2
2,937,189	-		CA265_RS11835	0.31	+0.3
2,937,266	+		CA265_RS11835	0.34	-0.7
2,937,266	+		CA265_RS11835	0.34	-0.2
2,937,267	-		CA265_RS11835	0.34	-0.4
2,937,349	+		CA265_RS11835	0.36	-0.2
2,937,351	+		CA265_RS11835	0.36	-1.2
2,937,352	-		CA265_RS11835	0.36	-2.1
2,937,352	-		CA265_RS11835	0.36	-1.0
2,937,364	-		CA265_RS11835	0.36	-1.6
2,937,364	-		CA265_RS11835	0.36	+0.6
2,937,369	+		CA265_RS11835	0.37	+0.0
2,937,403	+		CA265_RS11835	0.37	+0.2
2,937,410	-		CA265_RS11835	0.38	+0.0
2,937,442	-		CA265_RS11835	0.39	-1.7
2,937,449	-		CA265_RS11835	0.39	-0.6
2,937,516	-		CA265_RS11835	0.41	-0.3
2,937,516	-		CA265_RS11835	0.41	-0.8
2,937,524	+		CA265_RS11835	0.41	+0.8
2,937,525	-		CA265_RS11835	0.41	-0.7
2,937,525	-		CA265_RS11835	0.41	+1.3
2,937,526	+		CA265_RS11835	0.41	+0.5
2,937,527	-		CA265_RS11835	0.41	-0.5
2,937,527	-		CA265_RS11835	0.41	-0.2
2,937,529	-		CA265_RS11835	0.41	-0.1
2,937,561	-		CA265_RS11835	0.42	-0.1
2,937,625	+		CA265_RS11835	0.44	-0.5
2,937,625	+		CA265_RS11835	0.44	-0.8
2,937,694	+		CA265_RS11835	0.46	+0.3
2,937,707	+		CA265_RS11835	0.46	-0.5
2,937,728	+		CA265_RS11835	0.47	+0.9
2,937,728	+		CA265_RS11835	0.47	-0.1
2,937,738	+		CA265_RS11835	0.47	-0.9
2,937,750	-		CA265_RS11835	0.47	-0.9
2,937,790	+		CA265_RS11835	0.48	+0.5
2,937,867	-		CA265_RS11835	0.51	+0.3
2,937,898	+		CA265_RS11835	0.51	-0.8
2,937,898	+		CA265_RS11835	0.51	-0.6
2,937,935	-		CA265_RS11835	0.53	+0.2
2,937,943	+		CA265_RS11835	0.53	-0.2
2,937,944	-		CA265_RS11835	0.53	-0.5
2,937,970	+		CA265_RS11835	0.54	-0.0
2,937,977	-		CA265_RS11835	0.54	-0.3
2,937,997	-		CA265_RS11835	0.54	-1.0
2,938,008	+		CA265_RS11835	0.55	+0.5
2,938,009	-		CA265_RS11835	0.55	-0.3
2,938,012	+		CA265_RS11835	0.55	-0.5
2,938,066	+		CA265_RS11835	0.56	-0.9
2,938,079	+		CA265_RS11835	0.57	-2.8
2,938,080	-		CA265_RS11835	0.57	-0.9
2,938,080	-		CA265_RS11835	0.57	-0.2
2,938,106	-		CA265_RS11835	0.57	-0.5
2,938,204	+		CA265_RS11835	0.60	-0.6
2,938,205	-		CA265_RS11835	0.60	+0.0
2,938,208	-		CA265_RS11835	0.60	-0.6
2,938,263	-		CA265_RS11835	0.62	-0.5
2,938,263	-		CA265_RS11835	0.62	+0.1
2,938,267	-		CA265_RS11835	0.62	+0.1
2,938,296	-		CA265_RS11835	0.63	+0.4
2,938,307	-		CA265_RS11835	0.63	-0.5
2,938,396	+		CA265_RS11835	0.66	+0.6
2,938,396	+		CA265_RS11835	0.66	-0.0
2,938,397	-		CA265_RS11835	0.66	+0.1
2,938,451	-		CA265_RS11835	0.67	-0.3
2,938,451	-		CA265_RS11835	0.67	-0.4
2,938,513	+		CA265_RS11835	0.69	-0.1
2,938,547	+		CA265_RS11835	0.70	+0.3
2,938,571	+		CA265_RS11835	0.71	-0.0
2,938,571	+		CA265_RS11835	0.71	+0.1
2,938,571	+		CA265_RS11835	0.71	+0.5
2,938,605	-		CA265_RS11835	0.72	-0.0
2,938,611	-		CA265_RS11835	0.72	+0.0
2,938,664	+		CA265_RS11835	0.73	+0.2
2,938,664	+		CA265_RS11835	0.73	+0.5
2,938,680	-		CA265_RS11835	0.74	-0.6
2,938,729	+		CA265_RS11835	0.75	-0.3
2,938,742	-		CA265_RS11835	0.75	-0.6
2,938,806	-		CA265_RS11835	0.77	-0.5
2,938,867	+		CA265_RS11835	0.79	-0.1
2,938,899	-		CA265_RS11835	0.80	-0.4
2,938,923	+		CA265_RS11835	0.81	+0.2
2,938,923	+		CA265_RS11835	0.81	+0.2
2,938,924	-		CA265_RS11835	0.81	-0.1
2,938,973	+		CA265_RS11835	0.82	+0.1
2,938,973	+		CA265_RS11835	0.82	-0.7
2,938,974	-				+0.6
2,938,993	+		CA265_RS11835	0.82	+0.4
2,938,993	+		CA265_RS11835	0.82	+0.1
2,939,046	-		CA265_RS11835	0.84	-0.8
2,939,068	+		CA265_RS11835	0.85	+0.0
2,939,070	+		CA265_RS11835	0.85	+0.0
2,939,074	+		CA265_RS11835	0.85	+0.3
2,939,082	-		CA265_RS11835	0.85	-0.8
2,939,092	+		CA265_RS11835	0.85	-0.1
2,939,092	+		CA265_RS11835	0.85	-0.8
2,939,115	-		CA265_RS11835	0.86	+0.2
2,939,170	+		CA265_RS11835	0.87	+0.6
2,939,191	+		CA265_RS11835	0.88	+0.2
2,939,192	-		CA265_RS11835	0.88	+0.2
2,939,226	-		CA265_RS11835	0.89	+0.5
2,939,242	+		CA265_RS11835	0.90	+0.7
2,939,255	-		CA265_RS11835	0.90	+0.2
2,939,311	+				+0.1
2,939,357	+				+0.4
2,939,357	+				-0.6
2,939,490	-				+0.2
2,939,490	-				-0.3
2,939,519	+				-0.2
2,939,545	+				+1.3
2,939,552	+				-0.0
2,939,560	+				-0.3
2,939,594	+				-0.3
2,939,629	+				+0.1
2,939,658	+				+0.5
2,939,659	-				+1.7
2,939,707	+				-0.1
2,939,789	-		CA265_RS11840	0.14	+0.1
2,939,853	+		CA265_RS11840	0.20	+0.2
2,939,887	-		CA265_RS11840	0.24	+0.1
2,940,016	+		CA265_RS11840	0.36	+0.4
2,940,017	-		CA265_RS11840	0.37	+0.4
2,940,028	+		CA265_RS11840	0.38	-2.1
2,940,033	+		CA265_RS11840	0.38	-1.0
2,940,034	-		CA265_RS11840	0.38	+0.2
2,940,061	-		CA265_RS11840	0.41	+0.5
2,940,085	+		CA265_RS11840	0.43	+0.4
2,940,085	+		CA265_RS11840	0.43	-0.4
2,940,138	+		CA265_RS11840	0.48	+0.2
2,940,138	+		CA265_RS11840	0.48	+0.6
2,940,162	-		CA265_RS11840	0.51	+0.2
2,940,202	+		CA265_RS11840	0.55	-0.2
2,940,217	-		CA265_RS11840	0.56	-0.1
2,940,220	+		CA265_RS11840	0.56	+0.1
2,940,235	-		CA265_RS11840	0.58	-0.6
2,940,365	-		CA265_RS11840	0.71	-0.6
2,940,409	-		CA265_RS11840	0.75	+0.4
2,940,411	-		CA265_RS11840	0.75	+0.2
2,940,480	+		CA265_RS11840	0.82	+0.1
2,940,532	+		CA265_RS11840	0.87	+0.5
2,940,532	+		CA265_RS11840	0.87	+0.1
2,940,532	+		CA265_RS11840	0.87	-0.0
2,940,533	-		CA265_RS11840	0.87	+0.5
2,940,579	-				+0.6
2,940,581	-				-0.5
2,940,584	-				-0.5
2,940,584	-				-1.1