Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27920 and AO356_27925 are separated by 213 nucleotides AO356_27925 and AO356_27930 are separated by 109 nucleotides
AO356_27920: AO356_27920 - p-hydroxycinnamoyl CoA hydratase/lyase, at 6,371,242 to 6,372,072
_27920
AO356_27925: AO356_27925 - MarR family transcriptional regulator, at 6,372,286 to 6,372,771
_27925
AO356_27930: AO356_27930 - porin, at 6,372,881 to 6,374,188
_27930
Position (kb)
6372
6373 Strain fitness (log2 ratio)
-2
-1
0
1 at 6371.357 kb on + strand, within AO356_27920 at 6371.357 kb on + strand, within AO356_27920 at 6371.363 kb on + strand, within AO356_27920 at 6371.364 kb on - strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.567 kb on + strand, within AO356_27920 at 6371.567 kb on + strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.849 kb on + strand, within AO356_27920 at 6371.850 kb on - strand, within AO356_27920 at 6372.062 kb on + strand at 6372.063 kb on - strand at 6372.202 kb on - strand at 6372.265 kb on - strand at 6372.265 kb on - strand at 6372.568 kb on - strand, within AO356_27925 at 6372.626 kb on - strand, within AO356_27925 at 6372.769 kb on + strand at 6372.830 kb on + strand at 6372.831 kb on - strand at 6372.831 kb on - strand at 6372.900 kb on + strand at 6372.900 kb on + strand at 6372.900 kb on + strand at 6372.901 kb on - strand at 6372.901 kb on - strand at 6372.966 kb on + strand at 6372.966 kb on + strand at 6373.023 kb on + strand, within AO356_27930 at 6373.104 kb on + strand, within AO356_27930 at 6373.104 kb on + strand, within AO356_27930 at 6373.104 kb on + strand, within AO356_27930 at 6373.104 kb on + strand, within AO356_27930 at 6373.105 kb on - strand, within AO356_27930 at 6373.153 kb on - strand, within AO356_27930 at 6373.249 kb on - strand, within AO356_27930 at 6373.249 kb on - strand, within AO356_27930 at 6373.249 kb on - strand, within AO356_27930 at 6373.433 kb on - strand, within AO356_27930 at 6373.485 kb on + strand, within AO356_27930 at 6373.533 kb on + strand, within AO356_27930 at 6373.533 kb on + strand, within AO356_27930 at 6373.533 kb on + strand, within AO356_27930 at 6373.534 kb on - strand, within AO356_27930 at 6373.534 kb on - strand, within AO356_27930 at 6373.534 kb on - strand, within AO356_27930 at 6373.636 kb on + strand, within AO356_27930 at 6373.636 kb on + strand, within AO356_27930 at 6373.636 kb on + strand, within AO356_27930 at 6373.751 kb on + strand, within AO356_27930 at 6373.751 kb on + strand, within AO356_27930 at 6373.752 kb on - strand, within AO356_27930 at 6373.752 kb on - strand, within AO356_27930
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 6,371,357 + AO356_27920 0.14 +1.1 6,371,357 + AO356_27920 0.14 +0.2 6,371,363 + AO356_27920 0.15 +1.6 6,371,364 - AO356_27920 0.15 -1.1 6,371,564 + AO356_27920 0.39 +0.2 6,371,564 + AO356_27920 0.39 -0.3 6,371,564 + AO356_27920 0.39 +0.8 6,371,564 + AO356_27920 0.39 +0.5 6,371,564 + AO356_27920 0.39 +0.8 6,371,565 - AO356_27920 0.39 -0.2 6,371,565 - AO356_27920 0.39 -0.1 6,371,565 - AO356_27920 0.39 +1.3 6,371,567 + AO356_27920 0.39 -1.0 6,371,567 + AO356_27920 0.39 +0.6 6,371,760 - AO356_27920 0.62 -0.2 6,371,760 - AO356_27920 0.62 +0.0 6,371,760 - AO356_27920 0.62 +0.4 6,371,849 + AO356_27920 0.73 +0.0 6,371,850 - AO356_27920 0.73 +0.4 6,372,062 + -0.2 6,372,063 - +0.1 6,372,202 - -0.1 6,372,265 - +0.1 6,372,265 - +1.5 6,372,568 - AO356_27925 0.58 +0.6 6,372,626 - AO356_27925 0.70 +0.5 6,372,769 + -0.0 6,372,830 + +0.5 6,372,831 - -0.3 6,372,831 - +0.1 6,372,900 + -0.2 6,372,900 + +0.2 6,372,900 + +0.7 6,372,901 - -0.4 6,372,901 - +0.8 6,372,966 + +0.5 6,372,966 + -2.6 6,373,023 + AO356_27930 0.11 -0.4 6,373,104 + AO356_27930 0.17 -0.0 6,373,104 + AO356_27930 0.17 -1.3 6,373,104 + AO356_27930 0.17 +0.2 6,373,104 + AO356_27930 0.17 +0.6 6,373,105 - AO356_27930 0.17 -0.0 6,373,153 - AO356_27930 0.21 -0.2 6,373,249 - AO356_27930 0.28 -0.7 6,373,249 - AO356_27930 0.28 -0.9 6,373,249 - AO356_27930 0.28 +0.8 6,373,433 - AO356_27930 0.42 +0.4 6,373,485 + AO356_27930 0.46 +0.0 6,373,533 + AO356_27930 0.50 +0.1 6,373,533 + AO356_27930 0.50 +0.6 6,373,533 + AO356_27930 0.50 +0.3 6,373,534 - AO356_27930 0.50 +0.0 6,373,534 - AO356_27930 0.50 +0.1 6,373,534 - AO356_27930 0.50 -0.1 6,373,636 + AO356_27930 0.58 -0.6 6,373,636 + AO356_27930 0.58 -0.2 6,373,636 + AO356_27930 0.58 -0.6 6,373,751 + AO356_27930 0.67 -1.3 6,373,751 + AO356_27930 0.67 +0.7 6,373,752 - AO356_27930 0.67 +0.2 6,373,752 - AO356_27930 0.67 -1.5
Or see this region's nucleotide sequence