Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27910 and AO356_27915 are separated by 141 nucleotides AO356_27915 and AO356_27920 are separated by 105 nucleotides
AO356_27910: AO356_27910 - feruloyl-CoA synthase, at 6,367,669 to 6,369,546
_27910
AO356_27915: AO356_27915 - salicylaldehyde dehydrogenase, at 6,369,688 to 6,371,136
_27915
AO356_27920: AO356_27920 - p-hydroxycinnamoyl CoA hydratase/lyase, at 6,371,242 to 6,372,072
_27920
Position (kb)
6369
6370
6371
6372 Strain fitness (log2 ratio)
-1
0
1 at 6368.730 kb on + strand, within AO356_27910 at 6368.730 kb on + strand, within AO356_27910 at 6368.730 kb on + strand, within AO356_27910 at 6368.731 kb on - strand, within AO356_27910 at 6368.823 kb on + strand, within AO356_27910 at 6368.823 kb on + strand, within AO356_27910 at 6368.823 kb on + strand, within AO356_27910 at 6368.823 kb on + strand, within AO356_27910 at 6368.824 kb on - strand, within AO356_27910 at 6368.824 kb on - strand, within AO356_27910 at 6368.824 kb on - strand, within AO356_27910 at 6368.824 kb on - strand, within AO356_27910 at 6368.824 kb on - strand, within AO356_27910 at 6369.025 kb on + strand, within AO356_27910 at 6369.173 kb on + strand, within AO356_27910 at 6369.254 kb on + strand, within AO356_27910 at 6369.254 kb on + strand, within AO356_27910 at 6369.255 kb on - strand, within AO356_27910 at 6369.255 kb on - strand, within AO356_27910 at 6369.306 kb on - strand, within AO356_27910 at 6369.548 kb on + strand at 6369.548 kb on + strand at 6369.548 kb on + strand at 6369.627 kb on + strand at 6369.628 kb on - strand at 6369.628 kb on - strand at 6370.307 kb on + strand, within AO356_27915 at 6370.848 kb on - strand, within AO356_27915 at 6371.252 kb on + strand at 6371.252 kb on + strand at 6371.253 kb on - strand at 6371.357 kb on + strand, within AO356_27920 at 6371.357 kb on + strand, within AO356_27920 at 6371.363 kb on + strand, within AO356_27920 at 6371.364 kb on - strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.564 kb on + strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.565 kb on - strand, within AO356_27920 at 6371.567 kb on + strand, within AO356_27920 at 6371.567 kb on + strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.760 kb on - strand, within AO356_27920 at 6371.849 kb on + strand, within AO356_27920 at 6371.850 kb on - strand, within AO356_27920 at 6372.062 kb on + strand at 6372.063 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 6,368,730 + AO356_27910 0.56 -0.2 6,368,730 + AO356_27910 0.56 +0.4 6,368,730 + AO356_27910 0.56 +0.3 6,368,731 - AO356_27910 0.57 -1.0 6,368,823 + AO356_27910 0.61 +0.1 6,368,823 + AO356_27910 0.61 +0.5 6,368,823 + AO356_27910 0.61 -0.3 6,368,823 + AO356_27910 0.61 +0.7 6,368,824 - AO356_27910 0.62 +0.7 6,368,824 - AO356_27910 0.62 +0.6 6,368,824 - AO356_27910 0.62 -0.5 6,368,824 - AO356_27910 0.62 -0.1 6,368,824 - AO356_27910 0.62 +0.8 6,369,025 + AO356_27910 0.72 +0.5 6,369,173 + AO356_27910 0.80 +0.7 6,369,254 + AO356_27910 0.84 -0.1 6,369,254 + AO356_27910 0.84 +0.3 6,369,255 - AO356_27910 0.84 +0.9 6,369,255 - AO356_27910 0.84 +0.6 6,369,306 - AO356_27910 0.87 +0.9 6,369,548 + +0.1 6,369,548 + -0.4 6,369,548 + +0.3 6,369,627 + +0.3 6,369,628 - +0.4 6,369,628 - +0.9 6,370,307 + AO356_27915 0.43 -0.5 6,370,848 - AO356_27915 0.80 +0.2 6,371,252 + +0.7 6,371,252 + +0.6 6,371,253 - +0.1 6,371,357 + AO356_27920 0.14 +1.1 6,371,357 + AO356_27920 0.14 +0.2 6,371,363 + AO356_27920 0.15 +1.6 6,371,364 - AO356_27920 0.15 -1.1 6,371,564 + AO356_27920 0.39 +0.2 6,371,564 + AO356_27920 0.39 -0.3 6,371,564 + AO356_27920 0.39 +0.8 6,371,564 + AO356_27920 0.39 +0.5 6,371,564 + AO356_27920 0.39 +0.8 6,371,565 - AO356_27920 0.39 -0.2 6,371,565 - AO356_27920 0.39 -0.1 6,371,565 - AO356_27920 0.39 +1.3 6,371,567 + AO356_27920 0.39 -1.0 6,371,567 + AO356_27920 0.39 +0.6 6,371,760 - AO356_27920 0.62 -0.2 6,371,760 - AO356_27920 0.62 +0.0 6,371,760 - AO356_27920 0.62 +0.4 6,371,849 + AO356_27920 0.73 +0.0 6,371,850 - AO356_27920 0.73 +0.4 6,372,062 + -0.2 6,372,063 - +0.1
Or see this region's nucleotide sequence