Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25990 and AO356_25995 are separated by 228 nucleotides AO356_25995 and AO356_26000 are separated by 252 nucleotides
AO356_25990: AO356_25990 - hypothetical protein, at 5,876,541 to 5,877,341
_25990
AO356_25995: AO356_25995 - acetylglucosaminylphosphatidylinositol deacetylase, at 5,877,570 to 5,878,334
_25995
AO356_26000: AO356_26000 - glycogen debranching protein, at 5,878,587 to 5,880,746
_26000
Position (kb) 5877
5878
5879 Strain fitness (log2 ratio) -2
-1
0
1 at 5876.607 kb on + strand at 5876.641 kb on + strand, within AO356_25990 at 5876.641 kb on + strand, within AO356_25990 at 5876.641 kb on + strand, within AO356_25990 at 5876.641 kb on + strand, within AO356_25990 at 5876.681 kb on - strand, within AO356_25990 at 5876.847 kb on + strand, within AO356_25990 at 5876.848 kb on - strand, within AO356_25990 at 5876.848 kb on - strand, within AO356_25990 at 5876.995 kb on + strand, within AO356_25990 at 5877.245 kb on + strand, within AO356_25990 at 5877.245 kb on + strand, within AO356_25990 at 5877.245 kb on + strand, within AO356_25990 at 5877.362 kb on + strand at 5877.362 kb on + strand at 5877.362 kb on + strand at 5877.363 kb on - strand at 5877.558 kb on - strand at 5877.673 kb on + strand, within AO356_25995 at 5877.674 kb on - strand, within AO356_25995 at 5877.924 kb on - strand, within AO356_25995 at 5877.924 kb on - strand, within AO356_25995 at 5878.335 kb on - strand at 5878.350 kb on + strand at 5878.350 kb on + strand at 5878.350 kb on + strand at 5878.350 kb on + strand at 5878.351 kb on - strand at 5878.351 kb on - strand at 5878.351 kb on - strand at 5878.383 kb on + strand at 5878.460 kb on - strand at 5878.460 kb on - strand at 5878.565 kb on - strand at 5878.583 kb on + strand at 5878.583 kb on + strand at 5878.584 kb on - strand at 5878.584 kb on - strand at 5878.948 kb on + strand, within AO356_26000 at 5878.948 kb on + strand, within AO356_26000 at 5878.948 kb on + strand, within AO356_26000 at 5878.948 kb on + strand, within AO356_26000 at 5878.949 kb on - strand, within AO356_26000 at 5878.949 kb on - strand, within AO356_26000 at 5878.949 kb on - strand, within AO356_26000 at 5878.949 kb on - strand, within AO356_26000 at 5878.949 kb on - strand, within AO356_26000 at 5879.089 kb on + strand, within AO356_26000 at 5879.090 kb on - strand, within AO356_26000 at 5879.090 kb on - strand, within AO356_26000 at 5879.264 kb on + strand, within AO356_26000 at 5879.318 kb on - strand, within AO356_26000 at 5879.318 kb on - strand, within AO356_26000
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 5,876,607 + +1.1 5,876,641 + AO356_25990 0.12 +0.4 5,876,641 + AO356_25990 0.12 -0.2 5,876,641 + AO356_25990 0.12 +0.5 5,876,641 + AO356_25990 0.12 +0.4 5,876,681 - AO356_25990 0.17 +0.1 5,876,847 + AO356_25990 0.38 -0.4 5,876,848 - AO356_25990 0.38 +0.8 5,876,848 - AO356_25990 0.38 -0.3 5,876,995 + AO356_25990 0.57 +0.6 5,877,245 + AO356_25990 0.88 +0.9 5,877,245 + AO356_25990 0.88 +1.1 5,877,245 + AO356_25990 0.88 +0.3 5,877,362 + +0.4 5,877,362 + +0.5 5,877,362 + +0.3 5,877,363 - -0.6 5,877,558 - -0.1 5,877,673 + AO356_25995 0.13 +0.2 5,877,674 - AO356_25995 0.14 +0.6 5,877,924 - AO356_25995 0.46 +1.5 5,877,924 - AO356_25995 0.46 -2.7 5,878,335 - -0.2 5,878,350 + +0.4 5,878,350 + -1.8 5,878,350 + +0.2 5,878,350 + +0.1 5,878,351 - -0.0 5,878,351 - +0.6 5,878,351 - +0.6 5,878,383 + +0.0 5,878,460 - -0.5 5,878,460 - +0.3 5,878,565 - -0.6 5,878,583 + -0.2 5,878,583 + +0.1 5,878,584 - +0.1 5,878,584 - -0.6 5,878,948 + AO356_26000 0.17 -0.8 5,878,948 + AO356_26000 0.17 +0.4 5,878,948 + AO356_26000 0.17 -0.0 5,878,948 + AO356_26000 0.17 +0.7 5,878,949 - AO356_26000 0.17 +1.6 5,878,949 - AO356_26000 0.17 +0.3 5,878,949 - AO356_26000 0.17 +0.2 5,878,949 - AO356_26000 0.17 +0.8 5,878,949 - AO356_26000 0.17 -0.5 5,879,089 + AO356_26000 0.23 -0.6 5,879,090 - AO356_26000 0.23 -0.1 5,879,090 - AO356_26000 0.23 +0.4 5,879,264 + AO356_26000 0.31 -0.1 5,879,318 - AO356_26000 0.34 +0.7 5,879,318 - AO356_26000 0.34 -0.2
Or see this region's nucleotide sequence