Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24685 and AO356_24690 overlap by 8 nucleotides AO356_24690 and AO356_24695 are separated by 154 nucleotides AO356_24695 and AO356_24700 are separated by 316 nucleotides
AO356_24685: AO356_24685 - 2-dehydro-3-deoxygluconokinase, at 5,583,209 to 5,584,189
_24685
AO356_24690: AO356_24690 - AP endonuclease, at 5,584,182 to 5,584,964
_24690
AO356_24695: AO356_24695 - transcriptional regulator, at 5,585,119 to 5,586,105
_24695
AO356_24700: AO356_24700 - hypothetical protein, at 5,586,422 to 5,586,775
_24700
Position (kb) 5585
5586
5587 Strain fitness (log2 ratio) -2
-1
0
1 at 5584.411 kb on + strand, within AO356_24690 at 5584.411 kb on + strand, within AO356_24690 at 5584.412 kb on - strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.420 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.770 kb on + strand, within AO356_24690 at 5584.771 kb on - strand, within AO356_24690 at 5585.292 kb on - strand, within AO356_24695 at 5585.508 kb on + strand, within AO356_24695 at 5585.771 kb on + strand, within AO356_24695 at 5585.772 kb on - strand, within AO356_24695 at 5585.842 kb on - strand, within AO356_24695 at 5585.844 kb on - strand, within AO356_24695 at 5585.882 kb on - strand, within AO356_24695 at 5586.160 kb on + strand at 5586.160 kb on + strand at 5586.161 kb on - strand at 5586.163 kb on + strand at 5586.164 kb on - strand at 5586.294 kb on + strand at 5586.295 kb on - strand at 5586.295 kb on - strand at 5586.350 kb on + strand at 5586.350 kb on + strand at 5586.350 kb on + strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.351 kb on - strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.434 kb on + strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.435 kb on - strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.438 kb on + strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.439 kb on - strand at 5586.890 kb on - strand at 5586.936 kb on + strand at 5586.936 kb on + strand at 5586.977 kb on - strand at 5587.049 kb on + strand at 5587.050 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 5,584,411 + AO356_24690 0.29 +0.1 5,584,411 + AO356_24690 0.29 -0.3 5,584,412 - AO356_24690 0.29 -0.4 5,584,420 + AO356_24690 0.30 +0.7 5,584,420 + AO356_24690 0.30 +0.5 5,584,420 + AO356_24690 0.30 -0.3 5,584,770 + AO356_24690 0.75 +0.4 5,584,770 + AO356_24690 0.75 +1.5 5,584,770 + AO356_24690 0.75 -0.6 5,584,770 + AO356_24690 0.75 +1.1 5,584,771 - AO356_24690 0.75 +0.2 5,585,292 - AO356_24695 0.18 +1.1 5,585,508 + AO356_24695 0.39 +0.1 5,585,771 + AO356_24695 0.66 -0.5 5,585,772 - AO356_24695 0.66 +1.4 5,585,842 - AO356_24695 0.73 +1.0 5,585,844 - AO356_24695 0.73 +0.5 5,585,882 - AO356_24695 0.77 +0.1 5,586,160 + +0.0 5,586,160 + -0.1 5,586,161 - +1.2 5,586,163 + -1.0 5,586,164 - +1.3 5,586,294 + -0.7 5,586,295 - +0.9 5,586,295 - -0.2 5,586,350 + -0.2 5,586,350 + -1.9 5,586,350 + -0.7 5,586,351 - -2.1 5,586,351 - -0.2 5,586,351 - +0.2 5,586,351 - -0.9 5,586,434 + -0.1 5,586,434 + +1.1 5,586,434 + +0.5 5,586,434 + +0.1 5,586,435 - -0.1 5,586,435 - +1.0 5,586,435 - +1.2 5,586,435 - -0.0 5,586,435 - -0.1 5,586,438 + +1.0 5,586,438 + +0.5 5,586,438 + -1.1 5,586,438 + +0.8 5,586,438 + +0.4 5,586,438 + -0.1 5,586,438 + +0.5 5,586,439 - +0.7 5,586,439 - +0.1 5,586,439 - +0.3 5,586,439 - -0.6 5,586,439 - +0.6 5,586,439 - -0.1 5,586,439 - +0.5 5,586,890 - +1.7 5,586,936 + -2.3 5,586,936 + +0.7 5,586,977 - -0.3 5,587,049 + +1.5 5,587,050 - -0.5
Or see this region's nucleotide sequence