Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07520 and AO356_07525 are separated by 59 nucleotides AO356_07525 and AO356_07530 overlap by 4 nucleotides AO356_07530 and AO356_07535 are separated by 7 nucleotides AO356_07535 and AO356_07540 are separated by 118 nucleotides AO356_07540 and AO356_07545 are separated by 328 nucleotides
AO356_07520: AO356_07520 - hypothetical protein, at 1,665,635 to 1,666,162
_07520
AO356_07525: AO356_07525 - protein RnfH, at 1,666,222 to 1,666,524
_07525
AO356_07530: AO356_07530 - ribosome association toxin RatA, at 1,666,521 to 1,666,964
_07530
AO356_07535: AO356_07535 - symporter, at 1,666,972 to 1,668,375
_07535
AO356_07540: AO356_07540 - SsrA-binding protein, at 1,668,494 to 1,668,976
_07540
AO356_07545: AO356_07545 - transcriptional regulator PdhR, at 1,669,305 to 1,670,072
_07545
Position (kb)
1666
1667
1668
1669 Strain fitness (log2 ratio)
-2
-1
0
1 at 1666.160 kb on + strand at 1666.224 kb on - strand at 1666.502 kb on + strand at 1666.502 kb on + strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1666.967 kb on - strand at 1667.000 kb on - strand at 1667.000 kb on - strand at 1667.000 kb on - strand at 1667.025 kb on - strand at 1667.025 kb on - strand at 1667.025 kb on - strand at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.267 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.269 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.367 kb on - strand, within AO356_07535 at 1667.636 kb on + strand, within AO356_07535 at 1667.636 kb on + strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.637 kb on - strand, within AO356_07535 at 1667.645 kb on + strand, within AO356_07535 at 1667.646 kb on - strand, within AO356_07535 at 1667.646 kb on - strand, within AO356_07535 at 1667.646 kb on - strand, within AO356_07535 at 1667.787 kb on - strand, within AO356_07535 at 1667.787 kb on - strand, within AO356_07535 at 1667.952 kb on - strand, within AO356_07535 at 1667.952 kb on - strand, within AO356_07535 at 1668.011 kb on + strand, within AO356_07535 at 1668.011 kb on + strand, within AO356_07535 at 1668.011 kb on + strand, within AO356_07535 at 1668.011 kb on + strand, within AO356_07535 at 1668.012 kb on - strand, within AO356_07535 at 1668.012 kb on - strand, within AO356_07535 at 1668.012 kb on - strand, within AO356_07535 at 1668.042 kb on - strand, within AO356_07535 at 1668.042 kb on - strand, within AO356_07535 at 1668.042 kb on - strand, within AO356_07535 at 1668.042 kb on - strand, within AO356_07535 at 1668.127 kb on + strand, within AO356_07535 at 1668.232 kb on + strand, within AO356_07535 at 1668.233 kb on - strand, within AO356_07535 at 1668.233 kb on - strand, within AO356_07535 at 1668.233 kb on - strand, within AO356_07535 at 1668.233 kb on - strand, within AO356_07535 at 1668.251 kb on + strand at 1668.252 kb on - strand at 1668.266 kb on + strand at 1668.267 kb on - strand at 1668.267 kb on - strand at 1668.283 kb on - strand at 1668.283 kb on - strand at 1668.286 kb on - strand at 1668.320 kb on - strand at 1668.320 kb on - strand at 1668.320 kb on - strand at 1668.456 kb on + strand at 1668.479 kb on + strand at 1668.479 kb on + strand at 1668.479 kb on + strand at 1668.480 kb on - strand at 1668.480 kb on - strand at 1668.481 kb on + strand at 1668.481 kb on + strand at 1668.482 kb on - strand at 1668.482 kb on - strand at 1668.558 kb on - strand, within AO356_07540 at 1668.558 kb on - strand, within AO356_07540 at 1668.609 kb on + strand, within AO356_07540 at 1668.695 kb on - strand, within AO356_07540 at 1669.168 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,666,160 + +0.4 1,666,224 - -0.5 1,666,502 + +0.7 1,666,502 + +0.1 1,666,503 - +1.0 1,666,503 - +0.2 1,666,503 - +0.4 1,666,514 - -0.5 1,666,514 - +0.6 1,666,514 - +0.0 1,666,967 - +0.8 1,666,967 - +0.5 1,666,967 - +0.6 1,666,967 - -0.8 1,666,967 - +0.9 1,666,967 - +0.4 1,666,967 - -0.1 1,666,967 - +0.5 1,666,967 - +0.0 1,666,967 - -1.4 1,667,000 - +0.2 1,667,000 - -0.1 1,667,000 - -0.3 1,667,025 - +0.6 1,667,025 - +0.7 1,667,025 - -0.6 1,667,267 - AO356_07535 0.21 +0.6 1,667,267 - AO356_07535 0.21 +0.8 1,667,267 - AO356_07535 0.21 -0.2 1,667,267 - AO356_07535 0.21 +0.2 1,667,267 - AO356_07535 0.21 +0.2 1,667,267 - AO356_07535 0.21 +1.3 1,667,267 - AO356_07535 0.21 -0.4 1,667,267 - AO356_07535 0.21 +0.3 1,667,267 - AO356_07535 0.21 -0.5 1,667,269 - AO356_07535 0.21 -0.3 1,667,269 - AO356_07535 0.21 -0.4 1,667,269 - AO356_07535 0.21 -0.2 1,667,269 - AO356_07535 0.21 +0.9 1,667,269 - AO356_07535 0.21 +0.3 1,667,269 - AO356_07535 0.21 +1.0 1,667,269 - AO356_07535 0.21 +0.0 1,667,269 - AO356_07535 0.21 +0.3 1,667,269 - AO356_07535 0.21 -0.5 1,667,269 - AO356_07535 0.21 -1.2 1,667,269 - AO356_07535 0.21 +1.0 1,667,269 - AO356_07535 0.21 +0.4 1,667,367 - AO356_07535 0.28 -0.6 1,667,367 - AO356_07535 0.28 +0.6 1,667,367 - AO356_07535 0.28 -0.2 1,667,367 - AO356_07535 0.28 -0.5 1,667,367 - AO356_07535 0.28 -0.3 1,667,367 - AO356_07535 0.28 -0.1 1,667,367 - AO356_07535 0.28 +0.7 1,667,367 - AO356_07535 0.28 -0.5 1,667,367 - AO356_07535 0.28 +0.5 1,667,636 + AO356_07535 0.47 +0.1 1,667,636 + AO356_07535 0.47 +1.1 1,667,637 - AO356_07535 0.47 -0.0 1,667,637 - AO356_07535 0.47 +0.4 1,667,637 - AO356_07535 0.47 +0.6 1,667,637 - AO356_07535 0.47 -0.3 1,667,637 - AO356_07535 0.47 +0.1 1,667,637 - AO356_07535 0.47 +1.3 1,667,645 + AO356_07535 0.48 -0.1 1,667,646 - AO356_07535 0.48 +1.0 1,667,646 - AO356_07535 0.48 -0.1 1,667,646 - AO356_07535 0.48 -0.5 1,667,787 - AO356_07535 0.58 +0.5 1,667,787 - AO356_07535 0.58 +0.9 1,667,952 - AO356_07535 0.70 +0.9 1,667,952 - AO356_07535 0.70 +0.8 1,668,011 + AO356_07535 0.74 +0.4 1,668,011 + AO356_07535 0.74 +0.9 1,668,011 + AO356_07535 0.74 +1.5 1,668,011 + AO356_07535 0.74 -0.2 1,668,012 - AO356_07535 0.74 +1.4 1,668,012 - AO356_07535 0.74 +0.0 1,668,012 - AO356_07535 0.74 +0.3 1,668,042 - AO356_07535 0.76 -0.4 1,668,042 - AO356_07535 0.76 +0.3 1,668,042 - AO356_07535 0.76 +0.4 1,668,042 - AO356_07535 0.76 -0.5 1,668,127 + AO356_07535 0.82 -2.1 1,668,232 + AO356_07535 0.90 +1.3 1,668,233 - AO356_07535 0.90 -0.4 1,668,233 - AO356_07535 0.90 -0.1 1,668,233 - AO356_07535 0.90 +0.3 1,668,233 - AO356_07535 0.90 +1.5 1,668,251 + -0.5 1,668,252 - -1.9 1,668,266 + -0.4 1,668,267 - -0.7 1,668,267 - +0.4 1,668,283 - +0.1 1,668,283 - -0.1 1,668,286 - +1.5 1,668,320 - +0.1 1,668,320 - +0.4 1,668,320 - +0.1 1,668,456 + +0.1 1,668,479 + +0.8 1,668,479 + -1.3 1,668,479 + -0.5 1,668,480 - +0.0 1,668,480 - -1.4 1,668,481 + -0.2 1,668,481 + +0.2 1,668,482 - -0.0 1,668,482 - -0.1 1,668,558 - AO356_07540 0.13 -1.0 1,668,558 - AO356_07540 0.13 -1.8 1,668,609 + AO356_07540 0.24 -0.7 1,668,695 - AO356_07540 0.42 -0.8 1,669,168 + +0.5
Or see this region's nucleotide sequence