Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02425 and AO356_02430 overlap by 1 nucleotides AO356_02430 and AO356_02435 are separated by 5 nucleotides AO356_02435 and AO356_02440 overlap by 4 nucleotides AO356_02440 and AO356_02445 are separated by 149 nucleotides AO356_02445 and AO356_02450 overlap by 1 nucleotides
AO356_02425: AO356_02425 - cytochrome C oxidase Cbb3, at 528,679 to 530,121
_02425
AO356_02430: AO356_02430 - cytochrome C oxidase Cbb3, at 530,121 to 530,729
_02430
AO356_02435: AO356_02435 - cytochrome oxidase, at 530,735 to 530,920
_02435
AO356_02440: AO356_02440 - cytochrome C oxidase Cbb3, at 530,917 to 531,900
_02440
AO356_02445: AO356_02445 - prevent-host-death protein, at 532,050 to 532,304
_02445
AO356_02450: AO356_02450 - twitching motility protein PilT, at 532,304 to 532,726
_02450
Position (kb) 530
531
532 Strain fitness (log2 ratio) -1
0
1
2 at 529.943 kb on - strand, within AO356_02425 at 529.943 kb on - strand, within AO356_02425 at 529.943 kb on - strand, within AO356_02425 at 529.988 kb on + strand at 529.989 kb on - strand at 529.989 kb on - strand at 530.039 kb on - strand at 530.105 kb on + strand at 530.295 kb on + strand, within AO356_02430 at 530.295 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.493 kb on + strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.494 kb on - strand, within AO356_02430 at 530.616 kb on + strand, within AO356_02430 at 530.617 kb on - strand, within AO356_02430 at 530.617 kb on - strand, within AO356_02430 at 530.688 kb on + strand at 530.688 kb on + strand at 530.688 kb on + strand at 530.902 kb on + strand at 530.902 kb on + strand at 530.902 kb on + strand at 530.903 kb on - strand at 530.939 kb on - strand at 530.939 kb on - strand at 530.939 kb on - strand at 530.962 kb on - strand at 531.064 kb on + strand, within AO356_02440 at 531.065 kb on - strand, within AO356_02440 at 531.065 kb on - strand, within AO356_02440 at 531.181 kb on + strand, within AO356_02440 at 531.181 kb on + strand, within AO356_02440 at 531.182 kb on - strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.183 kb on + strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.184 kb on - strand, within AO356_02440 at 531.187 kb on + strand, within AO356_02440 at 531.188 kb on - strand, within AO356_02440 at 531.188 kb on - strand, within AO356_02440 at 531.568 kb on + strand, within AO356_02440 at 531.568 kb on + strand, within AO356_02440 at 531.736 kb on + strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.737 kb on - strand, within AO356_02440 at 531.848 kb on - strand at 531.848 kb on - strand at 531.853 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.916 kb on + strand at 531.917 kb on - strand at 531.986 kb on + strand at 532.035 kb on - strand at 532.064 kb on + strand at 532.064 kb on + strand at 532.065 kb on - strand at 532.065 kb on - strand at 532.168 kb on + strand, within AO356_02445 at 532.169 kb on - strand, within AO356_02445 at 532.183 kb on - strand, within AO356_02445 at 532.183 kb on - strand, within AO356_02445 at 532.307 kb on + strand at 532.307 kb on + strand at 532.307 kb on + strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.308 kb on - strand at 532.357 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.365 kb on + strand, within AO356_02450 at 532.366 kb on - strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.403 kb on + strand, within AO356_02450 at 532.404 kb on - strand, within AO356_02450 at 532.404 kb on - strand, within AO356_02450 at 532.423 kb on - strand, within AO356_02450 at 532.740 kb on - strand at 532.773 kb on - strand at 532.846 kb on + strand at 532.847 kb on - strand at 532.891 kb on + strand at 532.891 kb on + strand at 532.891 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 529,943 - AO356_02425 0.88 +1.4 529,943 - AO356_02425 0.88 +0.8 529,943 - AO356_02425 0.88 +1.0 529,988 + +1.5 529,989 - +0.7 529,989 - +0.3 530,039 - +1.0 530,105 + +0.6 530,295 + AO356_02430 0.29 +0.0 530,295 + AO356_02430 0.29 +1.2 530,493 + AO356_02430 0.61 +0.7 530,493 + AO356_02430 0.61 +1.1 530,493 + AO356_02430 0.61 +1.0 530,494 - AO356_02430 0.61 +0.3 530,494 - AO356_02430 0.61 +0.4 530,494 - AO356_02430 0.61 -0.0 530,494 - AO356_02430 0.61 -1.3 530,494 - AO356_02430 0.61 +0.5 530,494 - AO356_02430 0.61 +1.0 530,494 - AO356_02430 0.61 +0.6 530,494 - AO356_02430 0.61 +1.4 530,616 + AO356_02430 0.81 +1.1 530,617 - AO356_02430 0.81 +0.4 530,617 - AO356_02430 0.81 +0.8 530,688 + +1.5 530,688 + +2.7 530,688 + +1.0 530,902 + +1.7 530,902 + +0.8 530,902 + +1.3 530,903 - +1.5 530,939 - -0.2 530,939 - -0.1 530,939 - +1.3 530,962 - +1.2 531,064 + AO356_02440 0.15 +1.3 531,065 - AO356_02440 0.15 +0.5 531,065 - AO356_02440 0.15 +1.7 531,181 + AO356_02440 0.27 +0.2 531,181 + AO356_02440 0.27 +1.1 531,182 - AO356_02440 0.27 +0.2 531,183 + AO356_02440 0.27 +1.6 531,183 + AO356_02440 0.27 +0.7 531,183 + AO356_02440 0.27 +0.3 531,183 + AO356_02440 0.27 +1.2 531,184 - AO356_02440 0.27 +0.6 531,184 - AO356_02440 0.27 +1.3 531,184 - AO356_02440 0.27 +0.6 531,184 - AO356_02440 0.27 +1.4 531,184 - AO356_02440 0.27 +0.6 531,184 - AO356_02440 0.27 +1.2 531,187 + AO356_02440 0.27 +1.0 531,188 - AO356_02440 0.28 -0.3 531,188 - AO356_02440 0.28 -0.0 531,568 + AO356_02440 0.66 +0.9 531,568 + AO356_02440 0.66 +0.5 531,736 + AO356_02440 0.83 +0.6 531,737 - AO356_02440 0.83 +0.9 531,737 - AO356_02440 0.83 +1.1 531,737 - AO356_02440 0.83 +1.1 531,848 - +0.4 531,848 - +0.2 531,853 + +0.5 531,916 + +0.2 531,916 + +0.0 531,916 + +0.8 531,916 + -0.3 531,917 - +0.9 531,986 + +0.9 532,035 - +0.7 532,064 + +1.3 532,064 + +1.5 532,065 - +0.6 532,065 - +0.6 532,168 + AO356_02445 0.46 +1.2 532,169 - AO356_02445 0.47 +0.1 532,183 - AO356_02445 0.52 -0.6 532,183 - AO356_02445 0.52 -0.4 532,307 + +0.5 532,307 + -0.1 532,307 + +0.6 532,308 - +0.5 532,308 - +0.3 532,308 - +0.0 532,308 - -0.6 532,308 - -0.1 532,308 - +0.0 532,357 + AO356_02450 0.13 -0.9 532,365 + AO356_02450 0.14 -0.8 532,365 + AO356_02450 0.14 -0.1 532,365 + AO356_02450 0.14 +0.5 532,366 - AO356_02450 0.15 -0.2 532,403 + AO356_02450 0.23 +0.2 532,403 + AO356_02450 0.23 +0.7 532,403 + AO356_02450 0.23 +0.1 532,404 - AO356_02450 0.24 -0.1 532,404 - AO356_02450 0.24 +0.3 532,423 - AO356_02450 0.28 -0.3 532,740 - -0.1 532,773 - +0.2 532,846 + +0.1 532,847 - +0.3 532,891 + -0.1 532,891 + +0.2 532,891 + -0.6
Or see this region's nucleotide sequence