Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00565 and AO356_00570 are separated by 226 nucleotides AO356_00570 and AO356_00575 are separated by 51 nucleotides AO356_00575 and AO356_00580 are separated by 216 nucleotides
AO356_00565: AO356_00565 - peptidase, at 122,226 to 123,257
_00565
AO356_00570: AO356_00570 - phosphoglycerate mutase, at 123,484 to 124,194
_00570
AO356_00575: AO356_00575 - SCP-2 family sterol carrier protein, at 124,246 to 124,560
_00575
AO356_00580: AO356_00580 - formyl transferase, at 124,777 to 126,495
_00580
Position (kb)
124
125 Strain fitness (log2 ratio)
-2
-1
0
1 at 123.268 kb on + strand at 123.268 kb on + strand at 123.268 kb on + strand at 123.269 kb on - strand at 123.314 kb on - strand at 123.314 kb on - strand at 123.314 kb on - strand at 123.349 kb on + strand at 123.349 kb on + strand at 123.349 kb on + strand at 123.349 kb on + strand at 123.350 kb on - strand at 123.355 kb on + strand at 123.355 kb on + strand at 123.355 kb on + strand at 123.356 kb on - strand at 123.356 kb on - strand at 123.409 kb on + strand at 123.409 kb on + strand at 123.410 kb on - strand at 123.410 kb on - strand at 123.466 kb on + strand at 123.492 kb on + strand at 123.492 kb on + strand at 123.492 kb on + strand at 123.492 kb on + strand at 123.492 kb on + strand at 123.492 kb on + strand at 123.493 kb on - strand at 123.493 kb on - strand at 123.493 kb on - strand at 123.493 kb on - strand at 123.493 kb on - strand at 123.493 kb on - strand at 123.496 kb on + strand at 123.496 kb on + strand at 123.496 kb on + strand at 123.496 kb on + strand at 123.496 kb on + strand at 123.496 kb on + strand at 123.497 kb on - strand at 123.500 kb on + strand at 123.500 kb on + strand at 123.501 kb on - strand at 123.539 kb on - strand at 123.539 kb on - strand at 123.611 kb on + strand, within AO356_00570 at 123.611 kb on + strand, within AO356_00570 at 123.612 kb on - strand, within AO356_00570 at 123.654 kb on + strand, within AO356_00570 at 123.804 kb on + strand, within AO356_00570 at 123.804 kb on + strand, within AO356_00570 at 123.847 kb on - strand, within AO356_00570 at 123.847 kb on - strand, within AO356_00570 at 123.847 kb on - strand, within AO356_00570 at 123.886 kb on + strand, within AO356_00570 at 123.886 kb on + strand, within AO356_00570 at 123.887 kb on - strand, within AO356_00570 at 123.887 kb on - strand, within AO356_00570 at 124.204 kb on - strand at 124.208 kb on + strand at 124.209 kb on - strand at 124.209 kb on - strand at 124.209 kb on - strand at 124.209 kb on - strand at 124.209 kb on - strand at 124.221 kb on + strand at 124.232 kb on + strand at 124.232 kb on + strand at 124.233 kb on - strand at 124.233 kb on - strand at 124.233 kb on - strand at 124.268 kb on + strand at 124.268 kb on + strand at 124.269 kb on - strand at 124.323 kb on - strand, within AO356_00575 at 124.323 kb on - strand, within AO356_00575 at 124.707 kb on - strand at 124.707 kb on - strand at 124.707 kb on - strand at 125.182 kb on + strand, within AO356_00580 at 125.182 kb on + strand, within AO356_00580 at 125.182 kb on + strand, within AO356_00580 at 125.183 kb on - strand, within AO356_00580 at 125.183 kb on - strand, within AO356_00580 at 125.183 kb on - strand, within AO356_00580 at 125.183 kb on - strand, within AO356_00580 at 125.183 kb on - strand, within AO356_00580 at 125.184 kb on + strand, within AO356_00580 at 125.185 kb on - strand, within AO356_00580 at 125.239 kb on + strand, within AO356_00580 at 125.273 kb on - strand, within AO356_00580 at 125.428 kb on + strand, within AO356_00580 at 125.429 kb on - strand, within AO356_00580 at 125.434 kb on + strand, within AO356_00580 at 125.434 kb on + strand, within AO356_00580 at 125.435 kb on - strand, within AO356_00580 at 125.477 kb on + strand, within AO356_00580 at 125.477 kb on + strand, within AO356_00580
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 123,268 + +0.1 123,268 + +1.2 123,268 + +0.5 123,269 - -1.9 123,314 - -0.5 123,314 - +0.1 123,314 - +0.3 123,349 + -0.9 123,349 + +0.5 123,349 + -0.2 123,349 + -0.0 123,350 - -0.2 123,355 + +0.2 123,355 + -0.2 123,355 + -0.1 123,356 - +0.6 123,356 - -0.1 123,409 + +0.7 123,409 + -0.5 123,410 - +0.7 123,410 - -0.6 123,466 + +0.3 123,492 + -0.1 123,492 + +0.6 123,492 + +1.0 123,492 + +0.1 123,492 + -0.1 123,492 + +0.3 123,493 - +0.4 123,493 - -0.7 123,493 - -0.6 123,493 - -0.3 123,493 - +0.1 123,493 - -0.8 123,496 + -0.5 123,496 + +0.4 123,496 + -0.1 123,496 + +0.1 123,496 + -0.3 123,496 + +0.8 123,497 - +0.2 123,500 + -0.3 123,500 + +0.4 123,501 - -0.1 123,539 - -0.7 123,539 - +0.7 123,611 + AO356_00570 0.18 +0.1 123,611 + AO356_00570 0.18 +0.0 123,612 - AO356_00570 0.18 -0.8 123,654 + AO356_00570 0.24 -0.1 123,804 + AO356_00570 0.45 +0.5 123,804 + AO356_00570 0.45 -0.3 123,847 - AO356_00570 0.51 +0.7 123,847 - AO356_00570 0.51 +0.2 123,847 - AO356_00570 0.51 -0.1 123,886 + AO356_00570 0.57 -0.1 123,886 + AO356_00570 0.57 -1.5 123,887 - AO356_00570 0.57 -1.1 123,887 - AO356_00570 0.57 +0.7 124,204 - +0.4 124,208 + +0.1 124,209 - +0.1 124,209 - +0.1 124,209 - +1.0 124,209 - +0.5 124,209 - -0.4 124,221 + +0.2 124,232 + +0.8 124,232 + +0.8 124,233 - +0.7 124,233 - +1.0 124,233 - +0.4 124,268 + +0.1 124,268 + -0.0 124,269 - +1.5 124,323 - AO356_00575 0.24 +1.3 124,323 - AO356_00575 0.24 +0.6 124,707 - +0.8 124,707 - +0.7 124,707 - -1.1 125,182 + AO356_00580 0.24 -0.4 125,182 + AO356_00580 0.24 +1.5 125,182 + AO356_00580 0.24 +0.2 125,183 - AO356_00580 0.24 +0.2 125,183 - AO356_00580 0.24 +1.0 125,183 - AO356_00580 0.24 -0.4 125,183 - AO356_00580 0.24 +0.0 125,183 - AO356_00580 0.24 -0.3 125,184 + AO356_00580 0.24 -0.2 125,185 - AO356_00580 0.24 -1.5 125,239 + AO356_00580 0.27 +0.1 125,273 - AO356_00580 0.29 +1.0 125,428 + AO356_00580 0.38 +1.1 125,429 - AO356_00580 0.38 +0.0 125,434 + AO356_00580 0.38 +1.3 125,434 + AO356_00580 0.38 -0.3 125,435 - AO356_00580 0.38 -0.0 125,477 + AO356_00580 0.41 +0.0 125,477 + AO356_00580 0.41 +1.1
Or see this region's nucleotide sequence