Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19095 and ABZR87_RS19100 are separated by 81 nucleotides ABZR87_RS19100 and ABZR87_RS19105 are separated by 41 nucleotides ABZR87_RS19105 and ABZR87_RS19110 are separated by 1 nucleotides
ABZR87_RS19095: ABZR87_RS19095 - gluconate:H+ symporter, at 644,907 to 646,259
_RS19095
ABZR87_RS19100: ABZR87_RS19100 - RidA family protein, at 646,341 to 646,727
_RS19100
ABZR87_RS19105: ABZR87_RS19105 - amidohydrolase family protein, at 646,769 to 648,265
_RS19105
ABZR87_RS19110: ABZR87_RS19110 - MurR/RpiR family transcriptional regulator, at 648,267 to 649,136
_RS19110
Position (kb) 646
647
648
649 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 646.195 kb on + strand at 646.233 kb on + strand at 646.234 kb on - strand at 646.279 kb on + strand at 646.279 kb on + strand at 646.280 kb on - strand at 646.280 kb on - strand at 646.280 kb on - strand at 646.280 kb on - strand at 646.280 kb on - strand at 646.354 kb on + strand at 646.439 kb on - strand, within ABZR87_RS19100 at 646.439 kb on - strand, within ABZR87_RS19100 at 646.731 kb on + strand at 646.731 kb on + strand at 646.873 kb on - strand at 646.989 kb on + strand, within ABZR87_RS19105 at 646.989 kb on + strand, within ABZR87_RS19105 at 646.990 kb on - strand, within ABZR87_RS19105 at 647.097 kb on + strand, within ABZR87_RS19105 at 647.097 kb on + strand, within ABZR87_RS19105 at 647.097 kb on + strand, within ABZR87_RS19105 at 647.097 kb on + strand, within ABZR87_RS19105 at 647.098 kb on - strand, within ABZR87_RS19105 at 647.098 kb on - strand, within ABZR87_RS19105 at 647.098 kb on - strand, within ABZR87_RS19105 at 647.101 kb on - strand, within ABZR87_RS19105 at 647.101 kb on - strand, within ABZR87_RS19105 at 647.232 kb on + strand, within ABZR87_RS19105 at 647.409 kb on + strand, within ABZR87_RS19105 at 647.409 kb on + strand, within ABZR87_RS19105 at 647.409 kb on + strand, within ABZR87_RS19105 at 647.409 kb on + strand, within ABZR87_RS19105 at 647.410 kb on - strand, within ABZR87_RS19105 at 647.410 kb on - strand, within ABZR87_RS19105 at 647.614 kb on - strand, within ABZR87_RS19105 at 647.689 kb on - strand, within ABZR87_RS19105 at 647.877 kb on + strand, within ABZR87_RS19105 at 647.877 kb on + strand, within ABZR87_RS19105 at 648.064 kb on + strand, within ABZR87_RS19105 at 648.064 kb on + strand, within ABZR87_RS19105 at 648.065 kb on - strand, within ABZR87_RS19105 at 648.065 kb on - strand, within ABZR87_RS19105 at 648.319 kb on + strand at 648.320 kb on - strand at 648.320 kb on - strand at 648.320 kb on - strand at 648.320 kb on - strand at 648.333 kb on + strand at 648.334 kb on - strand at 648.529 kb on + strand, within ABZR87_RS19110 at 648.567 kb on + strand, within ABZR87_RS19110 at 648.568 kb on - strand, within ABZR87_RS19110 at 648.568 kb on - strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.652 kb on + strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.653 kb on - strand, within ABZR87_RS19110 at 648.915 kb on + strand, within ABZR87_RS19110 at 648.915 kb on - strand, within ABZR87_RS19110 at 648.916 kb on - strand, within ABZR87_RS19110 at 648.916 kb on - strand, within ABZR87_RS19110 at 649.148 kb on + strand at 649.148 kb on + strand at 649.148 kb on + strand at 649.149 kb on - strand at 649.149 kb on - strand at 649.215 kb on + strand at 649.247 kb on + strand at 649.247 kb on + strand at 649.248 kb on - strand at 649.248 kb on - strand at 649.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 646,195 + -3.8 646,233 + -3.6 646,234 - -2.0 646,279 + -2.0 646,279 + -2.3 646,280 - -0.3 646,280 - +0.2 646,280 - +0.6 646,280 - -0.0 646,280 - -1.0 646,354 + -3.6 646,439 - ABZR87_RS19100 0.25 +0.7 646,439 - ABZR87_RS19100 0.25 +0.3 646,731 + -2.4 646,731 + -2.5 646,873 - +0.7 646,989 + ABZR87_RS19105 0.15 -3.6 646,989 + ABZR87_RS19105 0.15 -2.2 646,990 - ABZR87_RS19105 0.15 +1.1 647,097 + ABZR87_RS19105 0.22 -4.0 647,097 + ABZR87_RS19105 0.22 -2.8 647,097 + ABZR87_RS19105 0.22 -3.6 647,097 + ABZR87_RS19105 0.22 -2.7 647,098 - ABZR87_RS19105 0.22 +0.7 647,098 - ABZR87_RS19105 0.22 +0.5 647,098 - ABZR87_RS19105 0.22 +0.4 647,101 - ABZR87_RS19105 0.22 +0.9 647,101 - ABZR87_RS19105 0.22 +1.1 647,232 + ABZR87_RS19105 0.31 -3.3 647,409 + ABZR87_RS19105 0.43 -3.4 647,409 + ABZR87_RS19105 0.43 -3.6 647,409 + ABZR87_RS19105 0.43 -0.5 647,409 + ABZR87_RS19105 0.43 -3.6 647,410 - ABZR87_RS19105 0.43 +0.6 647,410 - ABZR87_RS19105 0.43 -0.5 647,614 - ABZR87_RS19105 0.56 -0.7 647,689 - ABZR87_RS19105 0.61 -1.3 647,877 + ABZR87_RS19105 0.74 -1.9 647,877 + ABZR87_RS19105 0.74 -2.0 648,064 + ABZR87_RS19105 0.87 -2.1 648,064 + ABZR87_RS19105 0.87 -2.2 648,065 - ABZR87_RS19105 0.87 -0.4 648,065 - ABZR87_RS19105 0.87 -1.6 648,319 + -4.8 648,320 - +0.6 648,320 - -0.2 648,320 - +0.3 648,320 - +0.3 648,333 + -4.8 648,334 - +0.1 648,529 + ABZR87_RS19110 0.30 -3.6 648,567 + ABZR87_RS19110 0.34 -2.1 648,568 - ABZR87_RS19110 0.35 +0.4 648,568 - ABZR87_RS19110 0.35 -0.2 648,652 + ABZR87_RS19110 0.44 -0.9 648,652 + ABZR87_RS19110 0.44 -1.0 648,652 + ABZR87_RS19110 0.44 -0.8 648,652 + ABZR87_RS19110 0.44 -1.2 648,652 + ABZR87_RS19110 0.44 -1.6 648,652 + ABZR87_RS19110 0.44 -1.2 648,652 + ABZR87_RS19110 0.44 +0.0 648,653 - ABZR87_RS19110 0.44 +0.1 648,653 - ABZR87_RS19110 0.44 +0.6 648,653 - ABZR87_RS19110 0.44 +0.7 648,653 - ABZR87_RS19110 0.44 +0.7 648,653 - ABZR87_RS19110 0.44 +1.0 648,653 - ABZR87_RS19110 0.44 +1.6 648,653 - ABZR87_RS19110 0.44 +0.5 648,653 - ABZR87_RS19110 0.44 +0.0 648,653 - ABZR87_RS19110 0.44 +1.3 648,653 - ABZR87_RS19110 0.44 +0.4 648,653 - ABZR87_RS19110 0.44 +0.3 648,653 - ABZR87_RS19110 0.44 +0.5 648,915 + ABZR87_RS19110 0.74 -2.3 648,915 - ABZR87_RS19110 0.74 -1.4 648,916 - ABZR87_RS19110 0.75 +0.4 648,916 - ABZR87_RS19110 0.75 +0.4 649,148 + -1.5 649,148 + -2.5 649,148 + -2.0 649,149 - +0.3 649,149 - -0.0 649,215 + -1.4 649,247 + -2.1 649,247 + -2.5 649,248 - +0.0 649,248 - +0.3 649,248 - +0.9
Or see this region's nucleotide sequence