Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14750 and ABZR87_RS14755 are separated by 102 nucleotides ABZR87_RS14755 and ABZR87_RS14760 are separated by 141 nucleotides ABZR87_RS14760 and ABZR87_RS14765 overlap by 4 nucleotides
ABZR87_RS14750: ABZR87_RS14750 - urease accessory protein UreD, at 3,113,766 to 3,114,653
_RS14750
ABZR87_RS14755: ABZR87_RS14755 - urea ABC transporter ATP-binding subunit UrtE, at 3,114,756 to 3,115,448
_RS14755
ABZR87_RS14760: ABZR87_RS14760 - urea ABC transporter ATP-binding protein UrtD, at 3,115,590 to 3,116,441
_RS14760
ABZR87_RS14765: ABZR87_RS14765 - urea ABC transporter permease subunit UrtC, at 3,116,438 to 3,117,607
_RS14765
Position (kb)
3114
3115
3116 Strain fitness (log2 ratio)
-2
-1
0
1 at 3113.771 kb on + strand at 3113.771 kb on + strand at 3113.772 kb on - strand at 3113.772 kb on - strand at 3113.956 kb on + strand, within ABZR87_RS14750 at 3113.956 kb on + strand, within ABZR87_RS14750 at 3114.361 kb on + strand, within ABZR87_RS14750 at 3114.361 kb on + strand, within ABZR87_RS14750 at 3114.362 kb on - strand, within ABZR87_RS14750 at 3114.691 kb on + strand at 3114.692 kb on - strand at 3114.692 kb on - strand at 3114.794 kb on + strand at 3114.795 kb on - strand at 3114.795 kb on - strand at 3114.844 kb on + strand, within ABZR87_RS14755 at 3114.874 kb on + strand, within ABZR87_RS14755 at 3114.878 kb on - strand, within ABZR87_RS14755 at 3115.105 kb on + strand, within ABZR87_RS14755 at 3115.105 kb on + strand, within ABZR87_RS14755 at 3115.105 kb on + strand, within ABZR87_RS14755 at 3115.106 kb on - strand, within ABZR87_RS14755 at 3115.210 kb on + strand, within ABZR87_RS14755 at 3115.211 kb on - strand, within ABZR87_RS14755 at 3115.211 kb on - strand, within ABZR87_RS14755 at 3115.211 kb on - strand, within ABZR87_RS14755 at 3115.211 kb on - strand, within ABZR87_RS14755 at 3115.211 kb on - strand, within ABZR87_RS14755 at 3115.238 kb on - strand, within ABZR87_RS14755 at 3115.389 kb on - strand at 3115.418 kb on - strand at 3115.420 kb on + strand at 3115.421 kb on - strand at 3115.489 kb on + strand at 3115.527 kb on + strand at 3115.528 kb on - strand at 3115.573 kb on + strand at 3115.591 kb on + strand at 3115.592 kb on - strand at 3115.592 kb on - strand at 3116.198 kb on + strand, within ABZR87_RS14760 at 3116.198 kb on + strand, within ABZR87_RS14760 at 3116.198 kb on + strand, within ABZR87_RS14760 at 3116.332 kb on + strand, within ABZR87_RS14760 at 3116.333 kb on - strand, within ABZR87_RS14760 at 3116.333 kb on - strand, within ABZR87_RS14760
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,113,771 + +0.3 3,113,771 + +0.4 3,113,772 - -2.0 3,113,772 - +0.2 3,113,956 + ABZR87_RS14750 0.21 -0.4 3,113,956 + ABZR87_RS14750 0.21 -0.5 3,114,361 + ABZR87_RS14750 0.67 +0.1 3,114,361 + ABZR87_RS14750 0.67 -0.4 3,114,362 - ABZR87_RS14750 0.67 -0.1 3,114,691 + +0.4 3,114,692 - -0.1 3,114,692 - -0.2 3,114,794 + +1.1 3,114,795 - -1.0 3,114,795 - -0.3 3,114,844 + ABZR87_RS14755 0.13 +1.5 3,114,874 + ABZR87_RS14755 0.17 +0.8 3,114,878 - ABZR87_RS14755 0.18 +0.0 3,115,105 + ABZR87_RS14755 0.50 -0.3 3,115,105 + ABZR87_RS14755 0.50 +0.2 3,115,105 + ABZR87_RS14755 0.50 +0.1 3,115,106 - ABZR87_RS14755 0.51 -0.2 3,115,210 + ABZR87_RS14755 0.66 +0.6 3,115,211 - ABZR87_RS14755 0.66 +0.2 3,115,211 - ABZR87_RS14755 0.66 -0.3 3,115,211 - ABZR87_RS14755 0.66 +0.9 3,115,211 - ABZR87_RS14755 0.66 -0.0 3,115,211 - ABZR87_RS14755 0.66 +0.3 3,115,238 - ABZR87_RS14755 0.70 -0.2 3,115,389 - +0.8 3,115,418 - +1.0 3,115,420 + +0.0 3,115,421 - -0.7 3,115,489 + -0.0 3,115,527 + -0.1 3,115,528 - +0.4 3,115,573 + -1.7 3,115,591 + +0.8 3,115,592 - -0.1 3,115,592 - +0.8 3,116,198 + ABZR87_RS14760 0.71 -0.2 3,116,198 + ABZR87_RS14760 0.71 +0.1 3,116,198 + ABZR87_RS14760 0.71 -0.6 3,116,332 + ABZR87_RS14760 0.87 -0.3 3,116,333 - ABZR87_RS14760 0.87 -0.2 3,116,333 - ABZR87_RS14760 0.87 +0.3
Or see this region's nucleotide sequence