Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11420 and ABZR87_RS11425 are separated by 40 nucleotides ABZR87_RS11425 and ABZR87_RS11430 are separated by 126 nucleotides ABZR87_RS11430 and ABZR87_RS11435 are separated by 4 nucleotides ABZR87_RS11435 and ABZR87_RS11440 are separated by 296 nucleotides
ABZR87_RS11420: ABZR87_RS11420 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,420,382 to 2,421,542
_RS11420
ABZR87_RS11425: ABZR87_RS11425 - SMR family transporter, at 2,421,583 to 2,421,954
_RS11425
ABZR87_RS11430: ABZR87_RS11430 - glycosyltransferase family 39 protein, at 2,422,081 to 2,423,751
_RS11430
ABZR87_RS11435: ABZR87_RS11435 - Mth938-like domain-containing protein, at 2,423,756 to 2,424,136
_RS11435
ABZR87_RS11440: ABZR87_RS11440 - pyridoxal phosphate-dependent aminotransferase, at 2,424,433 to 2,425,674
_RS11440
Position (kb)
2422
2423
2424 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.386 kb on - strand, within ABZR87_RS11420 at 2421.386 kb on - strand, within ABZR87_RS11420 at 2421.996 kb on - strand at 2422.082 kb on + strand at 2422.082 kb on + strand at 2422.083 kb on + strand at 2422.083 kb on - strand at 2422.083 kb on - strand at 2422.083 kb on - strand at 2422.755 kb on - strand, within ABZR87_RS11430 at 2423.497 kb on - strand, within ABZR87_RS11430 at 2423.808 kb on - strand, within ABZR87_RS11435 at 2423.808 kb on - strand, within ABZR87_RS11435 at 2423.818 kb on - strand, within ABZR87_RS11435 at 2423.818 kb on - strand, within ABZR87_RS11435 at 2423.818 kb on - strand, within ABZR87_RS11435 at 2424.071 kb on - strand, within ABZR87_RS11435 at 2424.073 kb on - strand, within ABZR87_RS11435 at 2424.073 kb on - strand, within ABZR87_RS11435 at 2424.073 kb on - strand, within ABZR87_RS11435 at 2424.073 kb on - strand, within ABZR87_RS11435 at 2424.098 kb on - strand, within ABZR87_RS11435 at 2424.098 kb on - strand, within ABZR87_RS11435 at 2424.258 kb on + strand at 2424.259 kb on - strand at 2424.272 kb on - strand at 2424.305 kb on - strand at 2424.325 kb on + strand at 2424.325 kb on + strand at 2424.326 kb on - strand at 2424.326 kb on - strand at 2424.475 kb on + strand at 2424.475 kb on + strand at 2424.475 kb on + strand at 2424.475 kb on + strand at 2424.683 kb on - strand, within ABZR87_RS11440 at 2424.727 kb on + strand, within ABZR87_RS11440 at 2424.727 kb on + strand, within ABZR87_RS11440 at 2424.727 kb on + strand, within ABZR87_RS11440 at 2424.727 kb on + strand, within ABZR87_RS11440 at 2424.727 kb on + strand, within ABZR87_RS11440
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,421,098 - ABZR87_RS11420 0.62 +0.2 2,421,098 - ABZR87_RS11420 0.62 +1.7 2,421,098 - ABZR87_RS11420 0.62 +0.1 2,421,386 - ABZR87_RS11420 0.86 -0.0 2,421,386 - ABZR87_RS11420 0.86 +2.4 2,421,996 - +0.0 2,422,082 + -0.5 2,422,082 + +0.4 2,422,083 + -1.1 2,422,083 - -0.0 2,422,083 - -0.1 2,422,083 - +0.4 2,422,755 - ABZR87_RS11430 0.40 -1.9 2,423,497 - ABZR87_RS11430 0.85 +0.2 2,423,808 - ABZR87_RS11435 0.14 -0.4 2,423,808 - ABZR87_RS11435 0.14 +0.2 2,423,818 - ABZR87_RS11435 0.16 -0.5 2,423,818 - ABZR87_RS11435 0.16 -1.8 2,423,818 - ABZR87_RS11435 0.16 -1.5 2,424,071 - ABZR87_RS11435 0.83 -1.4 2,424,073 - ABZR87_RS11435 0.83 -0.0 2,424,073 - ABZR87_RS11435 0.83 -1.5 2,424,073 - ABZR87_RS11435 0.83 -1.9 2,424,073 - ABZR87_RS11435 0.83 -0.5 2,424,098 - ABZR87_RS11435 0.90 -0.6 2,424,098 - ABZR87_RS11435 0.90 -1.2 2,424,258 + -1.6 2,424,259 - -1.2 2,424,272 - -1.8 2,424,305 - -0.4 2,424,325 + -0.1 2,424,325 + +0.4 2,424,326 - -1.4 2,424,326 - -0.6 2,424,475 + -3.4 2,424,475 + +0.2 2,424,475 + -2.4 2,424,475 + -1.7 2,424,683 - ABZR87_RS11440 0.20 -1.2 2,424,727 + ABZR87_RS11440 0.24 -1.0 2,424,727 + ABZR87_RS11440 0.24 -1.9 2,424,727 + ABZR87_RS11440 0.24 -3.5 2,424,727 + ABZR87_RS11440 0.24 -2.4 2,424,727 + ABZR87_RS11440 0.24 -2.8
Or see this region's nucleotide sequence