Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11415 and ABZR87_RS11420 are separated by 7 nucleotides ABZR87_RS11420 and ABZR87_RS11425 are separated by 40 nucleotides ABZR87_RS11425 and ABZR87_RS11430 are separated by 126 nucleotides
ABZR87_RS11410: ABZR87_RS11410 - formyltransferase, at 2,418,441 to 2,419,382
_RS11410
ABZR87_RS11415: ABZR87_RS11415 - glycosyltransferase, at 2,419,379 to 2,420,374
_RS11415
ABZR87_RS11420: ABZR87_RS11420 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,420,382 to 2,421,542
_RS11420
ABZR87_RS11425: ABZR87_RS11425 - SMR family transporter, at 2,421,583 to 2,421,954
_RS11425
ABZR87_RS11430: ABZR87_RS11430 - glycosyltransferase family 39 protein, at 2,422,081 to 2,423,751
_RS11430
Position (kb)
2420
2421
2422 Strain fitness (log2 ratio)
-1
0
1
2 at 2420.376 kb on - strand at 2420.384 kb on - strand at 2420.384 kb on - strand at 2420.384 kb on - strand at 2420.390 kb on - strand at 2420.670 kb on - strand, within ABZR87_RS11420 at 2420.670 kb on - strand, within ABZR87_RS11420 at 2420.676 kb on - strand, within ABZR87_RS11420 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.098 kb on - strand, within ABZR87_RS11420 at 2421.386 kb on - strand, within ABZR87_RS11420 at 2421.386 kb on - strand, within ABZR87_RS11420 at 2421.996 kb on - strand at 2422.082 kb on + strand at 2422.082 kb on + strand at 2422.083 kb on + strand at 2422.083 kb on - strand at 2422.083 kb on - strand at 2422.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,420,376 - +0.6 2,420,384 - +0.3 2,420,384 - +0.4 2,420,384 - +0.5 2,420,390 - -0.5 2,420,670 - ABZR87_RS11420 0.25 -0.0 2,420,670 - ABZR87_RS11420 0.25 +0.6 2,420,676 - ABZR87_RS11420 0.25 +1.5 2,421,098 - ABZR87_RS11420 0.62 +0.2 2,421,098 - ABZR87_RS11420 0.62 +1.7 2,421,098 - ABZR87_RS11420 0.62 +0.1 2,421,386 - ABZR87_RS11420 0.86 -0.0 2,421,386 - ABZR87_RS11420 0.86 +2.4 2,421,996 - +0.0 2,422,082 + -0.5 2,422,082 + +0.4 2,422,083 + -1.1 2,422,083 - -0.0 2,422,083 - -0.1 2,422,083 - +0.4
Or see this region's nucleotide sequence