Experiment: LB, pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03198 and SMc03199 are separated by 12 nucleotides SMc03199 and SMc03200 are separated by 38 nucleotides
SMc03198: SMc03198 - molybdenum ABC transporter ATP-binding protein, at 3,161,583 to 3,162,656
SMc03198
SMc03199: SMc03199 - molybdenum transporter, at 3,162,669 to 3,163,196
SMc03199
SMc03200: SMc03200 - amino acid deaminase transmembrane protein, at 3,163,235 to 3,164,572
SMc03200
Position (kb)
3162
3163
3164 Strain fitness (log2 ratio)
-1
0
1 at 3161.820 kb on + strand, within SMc03198 at 3161.877 kb on + strand, within SMc03198 at 3161.878 kb on - strand, within SMc03198 at 3161.878 kb on - strand, within SMc03198 at 3162.102 kb on + strand, within SMc03198 at 3162.103 kb on - strand, within SMc03198 at 3162.144 kb on + strand, within SMc03198 at 3162.144 kb on + strand, within SMc03198 at 3162.144 kb on + strand at 3162.144 kb on + strand, within SMc03198 at 3162.145 kb on - strand, within SMc03198 at 3162.145 kb on - strand, within SMc03198 at 3162.347 kb on - strand, within SMc03198 at 3162.414 kb on + strand, within SMc03198 at 3162.414 kb on + strand, within SMc03198 at 3162.539 kb on - strand, within SMc03198 at 3162.539 kb on - strand, within SMc03198 at 3162.671 kb on - strand at 3162.879 kb on - strand, within SMc03199 at 3162.879 kb on - strand, within SMc03199 at 3162.901 kb on - strand, within SMc03199 at 3162.923 kb on + strand, within SMc03199 at 3162.923 kb on + strand, within SMc03199 at 3162.924 kb on - strand, within SMc03199 at 3162.924 kb on - strand, within SMc03199 at 3163.075 kb on + strand, within SMc03199 at 3163.076 kb on - strand, within SMc03199 at 3163.076 kb on - strand, within SMc03199 at 3163.076 kb on - strand, within SMc03199 at 3163.076 kb on - strand, within SMc03199 at 3163.210 kb on - strand at 3163.321 kb on + strand at 3163.550 kb on + strand, within SMc03200 at 3163.551 kb on - strand, within SMc03200 at 3163.552 kb on + strand, within SMc03200 at 3163.553 kb on - strand, within SMc03200 at 3163.697 kb on + strand, within SMc03200 at 3163.698 kb on - strand, within SMc03200 at 3163.699 kb on + strand, within SMc03200 at 3163.700 kb on - strand, within SMc03200 at 3164.012 kb on + strand, within SMc03200 at 3164.012 kb on + strand, within SMc03200 at 3164.012 kb on + strand, within SMc03200 at 3164.013 kb on - strand, within SMc03200 at 3164.013 kb on - strand, within SMc03200 at 3164.013 kb on - strand, within SMc03200
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH7 remove 3,161,820 + SMc03198 0.22 -0.3 3,161,877 + SMc03198 0.27 -0.3 3,161,878 - SMc03198 0.27 -0.2 3,161,878 - SMc03198 0.27 +0.3 3,162,102 + SMc03198 0.48 -1.0 3,162,103 - SMc03198 0.48 -0.1 3,162,144 + SMc03198 0.52 -0.1 3,162,144 + SMc03198 0.52 -0.1 3,162,144 + -0.4 3,162,144 + SMc03198 0.52 -0.7 3,162,145 - SMc03198 0.52 +0.8 3,162,145 - SMc03198 0.52 -0.1 3,162,347 - SMc03198 0.71 -0.2 3,162,414 + SMc03198 0.77 +0.6 3,162,414 + SMc03198 0.77 +0.4 3,162,539 - SMc03198 0.89 -0.0 3,162,539 - SMc03198 0.89 -0.2 3,162,671 - +0.5 3,162,879 - SMc03199 0.40 +0.1 3,162,879 - SMc03199 0.40 -1.0 3,162,901 - SMc03199 0.44 +0.2 3,162,923 + SMc03199 0.48 -0.3 3,162,923 + SMc03199 0.48 -0.2 3,162,924 - SMc03199 0.48 -0.7 3,162,924 - SMc03199 0.48 -0.3 3,163,075 + SMc03199 0.77 +0.0 3,163,076 - SMc03199 0.77 -0.5 3,163,076 - SMc03199 0.77 -0.9 3,163,076 - SMc03199 0.77 -0.8 3,163,076 - SMc03199 0.77 -0.3 3,163,210 - -0.4 3,163,321 + +0.2 3,163,550 + SMc03200 0.24 +0.1 3,163,551 - SMc03200 0.24 +0.5 3,163,552 + SMc03200 0.24 +0.1 3,163,553 - SMc03200 0.24 -0.3 3,163,697 + SMc03200 0.35 -0.2 3,163,698 - SMc03200 0.35 +0.1 3,163,699 + SMc03200 0.35 +0.6 3,163,700 - SMc03200 0.35 -0.8 3,164,012 + SMc03200 0.58 +0.7 3,164,012 + SMc03200 0.58 +0.2 3,164,012 + SMc03200 0.58 -0.4 3,164,013 - SMc03200 0.58 -0.0 3,164,013 - SMc03200 0.58 -1.4 3,164,013 - SMc03200 0.58 -0.1
Or see this region's nucleotide sequence