Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22870 and AO356_22875 are separated by 188 nucleotides AO356_22875 and AO356_22880 are separated by 41 nucleotides
AO356_22870: AO356_22870 - glycerate kinase, at 5,104,250 to 5,105,386
_22870
AO356_22875: AO356_22875 - chemotaxis protein, at 5,105,575 to 5,107,200
_22875
AO356_22880: AO356_22880 - aspartate aminotransferase, at 5,107,242 to 5,108,429
_22880
Position (kb)
5105
5106
5107
5108 Strain fitness (log2 ratio)
-1
0
1 at 5104.584 kb on - strand, within AO356_22870 at 5104.584 kb on - strand, within AO356_22870 at 5104.584 kb on - strand, within AO356_22870 at 5105.249 kb on + strand, within AO356_22870 at 5105.250 kb on - strand, within AO356_22870 at 5105.250 kb on - strand, within AO356_22870 at 5105.400 kb on + strand at 5105.400 kb on + strand at 5105.400 kb on + strand at 5105.449 kb on - strand at 5105.492 kb on - strand at 5105.516 kb on + strand at 5105.516 kb on + strand at 5105.529 kb on - strand at 5105.583 kb on - strand at 5105.657 kb on + strand at 5105.878 kb on + strand, within AO356_22875 at 5105.917 kb on + strand, within AO356_22875 at 5105.918 kb on - strand, within AO356_22875 at 5105.948 kb on - strand, within AO356_22875 at 5106.022 kb on - strand, within AO356_22875 at 5106.066 kb on + strand, within AO356_22875 at 5106.067 kb on - strand, within AO356_22875 at 5106.086 kb on + strand, within AO356_22875 at 5106.086 kb on + strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.087 kb on - strand, within AO356_22875 at 5106.127 kb on + strand, within AO356_22875 at 5106.127 kb on + strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875 at 5106.128 kb on - strand, within AO356_22875 at 5107.203 kb on + strand at 5107.204 kb on - strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.239 kb on + strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.240 kb on - strand at 5107.298 kb on + strand at 5107.435 kb on - strand, within AO356_22880 at 5107.511 kb on - strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.617 kb on + strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.618 kb on - strand, within AO356_22880 at 5107.626 kb on + strand, within AO356_22880 at 5107.626 kb on + strand, within AO356_22880 at 5107.627 kb on - strand, within AO356_22880 at 5107.860 kb on + strand, within AO356_22880 at 5107.860 kb on + strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.861 kb on - strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.875 kb on + strand, within AO356_22880 at 5107.876 kb on - strand, within AO356_22880 at 5107.876 kb on - strand, within AO356_22880
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 5,104,584 - AO356_22870 0.29 +1.2 5,104,584 - AO356_22870 0.29 -0.0 5,104,584 - AO356_22870 0.29 +0.2 5,105,249 + AO356_22870 0.88 -0.1 5,105,250 - AO356_22870 0.88 +0.4 5,105,250 - AO356_22870 0.88 -1.1 5,105,400 + +0.6 5,105,400 + -0.1 5,105,400 + -0.1 5,105,449 - +0.6 5,105,492 - +0.2 5,105,516 + +1.5 5,105,516 + +0.1 5,105,529 - -0.1 5,105,583 - +1.3 5,105,657 + -0.2 5,105,878 + AO356_22875 0.19 -1.3 5,105,917 + AO356_22875 0.21 +0.5 5,105,918 - AO356_22875 0.21 -0.2 5,105,948 - AO356_22875 0.23 -0.6 5,106,022 - AO356_22875 0.27 +1.2 5,106,066 + AO356_22875 0.30 +0.1 5,106,067 - AO356_22875 0.30 +0.2 5,106,086 + AO356_22875 0.31 +0.9 5,106,086 + AO356_22875 0.31 -0.0 5,106,087 - AO356_22875 0.31 -1.3 5,106,087 - AO356_22875 0.31 -0.2 5,106,087 - AO356_22875 0.31 +0.8 5,106,087 - AO356_22875 0.31 -0.5 5,106,127 + AO356_22875 0.34 -1.0 5,106,127 + AO356_22875 0.34 -0.4 5,106,128 - AO356_22875 0.34 +0.1 5,106,128 - AO356_22875 0.34 +0.3 5,106,128 - AO356_22875 0.34 +0.2 5,107,203 + +0.6 5,107,204 - -0.1 5,107,239 + +0.9 5,107,239 + +1.3 5,107,239 + +0.1 5,107,239 + +0.1 5,107,239 + +0.0 5,107,239 + +0.7 5,107,239 + +0.4 5,107,240 - -1.4 5,107,240 - -0.2 5,107,240 - +0.3 5,107,240 - +0.2 5,107,240 - +0.1 5,107,240 - +1.0 5,107,298 + -0.1 5,107,435 - AO356_22880 0.16 -0.1 5,107,511 - AO356_22880 0.23 -0.2 5,107,617 + AO356_22880 0.32 +0.7 5,107,617 + AO356_22880 0.32 -0.5 5,107,617 + AO356_22880 0.32 +0.0 5,107,617 + AO356_22880 0.32 -0.6 5,107,617 + AO356_22880 0.32 -0.0 5,107,618 - AO356_22880 0.32 -0.5 5,107,618 - AO356_22880 0.32 -0.2 5,107,618 - AO356_22880 0.32 -0.1 5,107,618 - AO356_22880 0.32 -0.3 5,107,618 - AO356_22880 0.32 -0.8 5,107,626 + AO356_22880 0.32 -0.0 5,107,626 + AO356_22880 0.32 +0.2 5,107,627 - AO356_22880 0.32 +0.7 5,107,860 + AO356_22880 0.52 -0.9 5,107,860 + AO356_22880 0.52 -0.6 5,107,861 - AO356_22880 0.52 -1.0 5,107,861 - AO356_22880 0.52 -0.0 5,107,861 - AO356_22880 0.52 +0.1 5,107,861 - AO356_22880 0.52 -0.4 5,107,875 + AO356_22880 0.53 +0.2 5,107,875 + AO356_22880 0.53 -0.7 5,107,875 + AO356_22880 0.53 +0.3 5,107,875 + AO356_22880 0.53 -0.1 5,107,876 - AO356_22880 0.53 +0.2 5,107,876 - AO356_22880 0.53 -0.6
Or see this region's nucleotide sequence