Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18255

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_18250 and AO356_18255 are separated by 86 nucleotidesAO356_18255 and AO356_18260 are separated by 323 nucleotidesAO356_18260 and AO356_18265 are separated by 115 nucleotides AO356_18250: AO356_18250 - glycerol kinase, at 4,113,340 to 4,114,845 _18250 AO356_18255: AO356_18255 - glycerol uptake facilitator GlpF, at 4,114,932 to 4,115,783 _18255 AO356_18260: AO356_18260 - hypothetical protein, at 4,116,107 to 4,116,577 _18260 AO356_18265: AO356_18265 - isomerase, at 4,116,693 to 4,117,484 _18265 Position (kb) 4114 4115 4116Strain fitness (log2 ratio) -1 0 1at 4113.934 kb on + strand, within AO356_18250at 4113.934 kb on + strand, within AO356_18250at 4113.934 kb on + strand, within AO356_18250at 4113.934 kb on + strand, within AO356_18250at 4113.934 kb on + strand, within AO356_18250at 4113.934 kb on + strand, within AO356_18250at 4113.935 kb on - strand, within AO356_18250at 4113.935 kb on - strand, within AO356_18250at 4113.935 kb on - strand, within AO356_18250at 4113.953 kb on + strand, within AO356_18250at 4113.953 kb on + strand, within AO356_18250at 4114.163 kb on + strand, within AO356_18250at 4114.163 kb on + strand, within AO356_18250at 4114.286 kb on + strand, within AO356_18250at 4114.287 kb on - strand, within AO356_18250at 4114.430 kb on + strand, within AO356_18250at 4114.430 kb on + strand, within AO356_18250at 4114.430 kb on + strand, within AO356_18250at 4114.430 kb on + strand, within AO356_18250at 4114.430 kb on + strand, within AO356_18250at 4114.431 kb on - strand, within AO356_18250at 4114.431 kb on - strand, within AO356_18250at 4114.431 kb on - strand, within AO356_18250at 4114.431 kb on - strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.466 kb on + strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.467 kb on - strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.541 kb on + strand, within AO356_18250at 4114.542 kb on - strand, within AO356_18250at 4114.718 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.820 kb on + strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.821 kb on - strandat 4114.868 kb on + strandat 4114.869 kb on - strandat 4114.869 kb on - strandat 4114.880 kb on + strandat 4114.880 kb on + strandat 4114.880 kb on + strandat 4114.880 kb on + strandat 4114.881 kb on - strandat 4114.979 kb on + strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.980 kb on - strandat 4114.987 kb on - strandat 4114.987 kb on - strandat 4114.987 kb on - strandat 4114.987 kb on - strandat 4114.987 kb on - strandat 4115.080 kb on + strand, within AO356_18255at 4115.144 kb on + strand, within AO356_18255at 4115.214 kb on + strand, within AO356_18255at 4115.226 kb on + strand, within AO356_18255at 4115.226 kb on + strand, within AO356_18255at 4115.226 kb on + strand, within AO356_18255at 4115.227 kb on - strand, within AO356_18255at 4115.227 kb on - strand, within AO356_18255at 4115.227 kb on - strand, within AO356_18255at 4115.227 kb on - strand, within AO356_18255at 4115.362 kb on + strand, within AO356_18255at 4115.442 kb on + strand, within AO356_18255at 4115.442 kb on + strand, within AO356_18255at 4115.442 kb on + strand, within AO356_18255at 4115.442 kb on + strand, within AO356_18255at 4115.442 kb on + strand, within AO356_18255at 4115.443 kb on - strand, within AO356_18255at 4115.443 kb on - strand, within AO356_18255at 4115.443 kb on - strand, within AO356_18255at 4115.453 kb on - strand, within AO356_18255at 4115.453 kb on - strand, within AO356_18255at 4115.505 kb on + strand, within AO356_18255at 4115.505 kb on + strand, within AO356_18255at 4115.505 kb on + strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.506 kb on - strand, within AO356_18255at 4115.507 kb on + strand, within AO356_18255at 4115.507 kb on + strand, within AO356_18255at 4115.507 kb on + strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.508 kb on - strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.509 kb on + strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.510 kb on - strand, within AO356_18255at 4115.606 kb on - strand, within AO356_18255at 4115.606 kb on - strand, within AO356_18255at 4115.606 kb on - strand, within AO356_18255at 4115.606 kb on - strand, within AO356_18255at 4115.770 kb on - strandat 4115.770 kb on - strandat 4115.770 kb on - strandat 4115.770 kb on - strandat 4115.822 kb on + strandat 4115.822 kb on + strandat 4115.822 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.893 kb on + strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.894 kb on - strandat 4115.919 kb on + strandat 4115.978 kb on - strandat 4115.978 kb on - strandat 4116.063 kb on + strandat 4116.063 kb on + strandat 4116.063 kb on + strandat 4116.064 kb on - strandat 4116.064 kb on - strandat 4116.130 kb on + strandat 4116.131 kb on - strandat 4116.131 kb on - strandat 4116.138 kb on + strandat 4116.138 kb on + strandat 4116.164 kb on + strand, within AO356_18260at 4116.164 kb on + strand, within AO356_18260at 4116.165 kb on - strand, within AO356_18260at 4116.165 kb on - strand, within AO356_18260at 4116.165 kb on - strand, within AO356_18260at 4116.191 kb on + strand, within AO356_18260at 4116.191 kb on + strand, within AO356_18260at 4116.192 kb on - strand, within AO356_18260at 4116.289 kb on - strand, within AO356_18260at 4116.579 kb on - strandat 4116.579 kb on - strandat 4116.579 kb on - strandat 4116.606 kb on + strandat 4116.607 kb on - strandat 4116.607 kb on - strandat 4116.639 kb on - strandat 4116.679 kb on + strandat 4116.680 kb on - strandat 4116.762 kb on + strandat 4116.763 kb on - strandat 4116.763 kb on - strandat 4116.763 kb on - strandat 4116.763 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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4,113,934 + AO356_18250 0.39 -0.9
4,113,934 + AO356_18250 0.39 +0.1
4,113,934 + AO356_18250 0.39 -0.9
4,113,934 + AO356_18250 0.39 +0.1
4,113,934 + AO356_18250 0.39 +0.1
4,113,934 + AO356_18250 0.39 +0.4
4,113,935 - AO356_18250 0.40 +0.7
4,113,935 - AO356_18250 0.40 +0.5
4,113,935 - AO356_18250 0.40 -0.5
4,113,953 + AO356_18250 0.41 -0.6
4,113,953 + AO356_18250 0.41 -0.9
4,114,163 + AO356_18250 0.55 -0.5
4,114,163 + AO356_18250 0.55 +0.7
4,114,286 + AO356_18250 0.63 -0.4
4,114,287 - AO356_18250 0.63 +1.3
4,114,430 + AO356_18250 0.72 +0.3
4,114,430 + AO356_18250 0.72 +0.5
4,114,430 + AO356_18250 0.72 +0.2
4,114,430 + AO356_18250 0.72 -0.0
4,114,430 + AO356_18250 0.72 +0.2
4,114,431 - AO356_18250 0.72 +0.1
4,114,431 - AO356_18250 0.72 -1.2
4,114,431 - AO356_18250 0.72 -0.1
4,114,431 - AO356_18250 0.72 +0.5
4,114,466 + AO356_18250 0.75 +0.6
4,114,466 + AO356_18250 0.75 +0.1
4,114,466 + AO356_18250 0.75 +0.5
4,114,466 + AO356_18250 0.75 +0.4
4,114,466 + AO356_18250 0.75 -0.1
4,114,466 + AO356_18250 0.75 -0.6
4,114,466 + AO356_18250 0.75 +0.5
4,114,466 + AO356_18250 0.75 +0.3
4,114,466 + AO356_18250 0.75 +1.1
4,114,466 + AO356_18250 0.75 +0.1
4,114,466 + AO356_18250 0.75 +0.9
4,114,466 + AO356_18250 0.75 -0.5
4,114,466 + AO356_18250 0.75 +0.6
4,114,467 - AO356_18250 0.75 +0.2
4,114,467 - AO356_18250 0.75 -0.2
4,114,467 - AO356_18250 0.75 -0.1
4,114,467 - AO356_18250 0.75 +0.3
4,114,467 - AO356_18250 0.75 -0.3
4,114,467 - AO356_18250 0.75 -0.1
4,114,467 - AO356_18250 0.75 +0.4
4,114,541 + AO356_18250 0.80 +1.2
4,114,541 + AO356_18250 0.80 +0.8
4,114,541 + AO356_18250 0.80 -0.3
4,114,541 + AO356_18250 0.80 +0.7
4,114,541 + AO356_18250 0.80 +0.4
4,114,541 + AO356_18250 0.80 +0.6
4,114,542 - AO356_18250 0.80 +0.2
4,114,718 + -0.5
4,114,820 + +0.7
4,114,820 + +0.3
4,114,820 + +0.3
4,114,820 + -0.2
4,114,820 + +0.8
4,114,820 + +0.8
4,114,820 + -1.5
4,114,820 + +0.2
4,114,820 + +0.4
4,114,820 + -0.0
4,114,820 + +0.4
4,114,821 - -0.1
4,114,821 - -1.2
4,114,821 - -0.1
4,114,821 - -0.1
4,114,821 - +0.6
4,114,821 - -0.2
4,114,821 - +0.1
4,114,821 - +0.1
4,114,821 - +0.0
4,114,821 - -0.1
4,114,821 - +0.7
4,114,821 - +1.1
4,114,868 + -0.9
4,114,869 - +0.1
4,114,869 - +0.8
4,114,880 + +0.7
4,114,880 + -0.2
4,114,880 + -0.2
4,114,880 + -0.2
4,114,881 - +1.2
4,114,979 + +0.1
4,114,980 - +0.2
4,114,980 - -0.5
4,114,980 - +0.6
4,114,980 - +0.9
4,114,980 - -0.1
4,114,980 - -0.1
4,114,980 - -1.3
4,114,980 - -0.6
4,114,987 - -0.5
4,114,987 - +0.6
4,114,987 - +1.6
4,114,987 - -0.2
4,114,987 - -0.4
4,115,080 + AO356_18255 0.17 +0.1
4,115,144 + AO356_18255 0.25 -1.0
4,115,214 + AO356_18255 0.33 +0.7
4,115,226 + AO356_18255 0.35 -0.3
4,115,226 + AO356_18255 0.35 +0.2
4,115,226 + AO356_18255 0.35 +1.0
4,115,227 - AO356_18255 0.35 -0.1
4,115,227 - AO356_18255 0.35 +1.3
4,115,227 - AO356_18255 0.35 -1.6
4,115,227 - AO356_18255 0.35 -0.6
4,115,362 + AO356_18255 0.50 -0.4
4,115,442 + AO356_18255 0.60 -0.3
4,115,442 + AO356_18255 0.60 +0.1
4,115,442 + AO356_18255 0.60 -1.0
4,115,442 + AO356_18255 0.60 +0.8
4,115,442 + AO356_18255 0.60 -0.0
4,115,443 - AO356_18255 0.60 -0.0
4,115,443 - AO356_18255 0.60 -0.5
4,115,443 - AO356_18255 0.60 +1.6
4,115,453 - AO356_18255 0.61 +0.6
4,115,453 - AO356_18255 0.61 -0.2
4,115,505 + AO356_18255 0.67 -1.1
4,115,505 + AO356_18255 0.67 -0.0
4,115,505 + AO356_18255 0.67 -0.7
4,115,506 - AO356_18255 0.67 -0.9
4,115,506 - AO356_18255 0.67 -0.5
4,115,506 - AO356_18255 0.67 +0.3
4,115,506 - AO356_18255 0.67 -0.3
4,115,506 - AO356_18255 0.67 +1.0
4,115,506 - AO356_18255 0.67 +0.4
4,115,507 + AO356_18255 0.67 +0.3
4,115,507 + AO356_18255 0.67 +0.9
4,115,507 + AO356_18255 0.67 -0.1
4,115,508 - AO356_18255 0.68 +0.9
4,115,508 - AO356_18255 0.68 -0.3
4,115,508 - AO356_18255 0.68 +0.0
4,115,508 - AO356_18255 0.68 -0.2
4,115,508 - AO356_18255 0.68 +0.8
4,115,508 - AO356_18255 0.68 +0.9
4,115,508 - AO356_18255 0.68 +0.3
4,115,509 + AO356_18255 0.68 +0.1
4,115,509 + AO356_18255 0.68 +0.4
4,115,509 + AO356_18255 0.68 +0.3
4,115,509 + AO356_18255 0.68 -0.4
4,115,509 + AO356_18255 0.68 +0.1
4,115,509 + AO356_18255 0.68 -0.0
4,115,509 + AO356_18255 0.68 +0.1
4,115,510 - AO356_18255 0.68 +0.2
4,115,510 - AO356_18255 0.68 +0.3
4,115,510 - AO356_18255 0.68 +0.5
4,115,510 - AO356_18255 0.68 +0.3
4,115,510 - AO356_18255 0.68 +0.4
4,115,510 - AO356_18255 0.68 +1.3
4,115,510 - AO356_18255 0.68 +0.8
4,115,510 - AO356_18255 0.68 +0.4
4,115,510 - AO356_18255 0.68 +1.2
4,115,510 - AO356_18255 0.68 +0.7
4,115,510 - AO356_18255 0.68 -0.7
4,115,510 - AO356_18255 0.68 +0.8
4,115,606 - AO356_18255 0.79 +1.4
4,115,606 - AO356_18255 0.79 +0.4
4,115,606 - AO356_18255 0.79 +1.2
4,115,606 - AO356_18255 0.79 +1.2
4,115,770 - +0.4
4,115,770 - -0.1
4,115,770 - -0.4
4,115,770 - +0.2
4,115,822 + +1.2
4,115,822 + +0.2
4,115,822 + +0.1
4,115,893 + +0.8
4,115,893 + +0.4
4,115,893 + -0.8
4,115,893 + +0.9
4,115,893 + +0.7
4,115,893 + +0.3
4,115,893 + +0.1
4,115,893 + +0.2
4,115,893 + +0.4
4,115,893 + +0.7
4,115,893 + +0.1
4,115,894 - -0.3
4,115,894 - -0.5
4,115,894 - -0.5
4,115,894 - -0.4
4,115,894 - -0.7
4,115,894 - +0.5
4,115,894 - -0.7
4,115,894 - +1.1
4,115,894 - +0.5
4,115,894 - +0.2
4,115,894 - +1.1
4,115,894 - +0.4
4,115,919 + -0.5
4,115,978 - +0.2
4,115,978 - +0.1
4,116,063 + +1.0
4,116,063 + +0.5
4,116,063 + +0.7
4,116,064 - +0.3
4,116,064 - -0.6
4,116,130 + -0.3
4,116,131 - -0.8
4,116,131 - -0.3
4,116,138 + +1.1
4,116,138 + +0.4
4,116,164 + AO356_18260 0.12 +1.0
4,116,164 + AO356_18260 0.12 -0.6
4,116,165 - AO356_18260 0.12 -0.8
4,116,165 - AO356_18260 0.12 -0.0
4,116,165 - AO356_18260 0.12 -1.7
4,116,191 + AO356_18260 0.18 -0.4
4,116,191 + AO356_18260 0.18 -0.4
4,116,192 - AO356_18260 0.18 -0.7
4,116,289 - AO356_18260 0.39 -0.6
4,116,579 - -0.2
4,116,579 - +0.6
4,116,579 - -0.8
4,116,606 + +0.5
4,116,607 - +0.2
4,116,607 - +0.7
4,116,639 - -0.1
4,116,679 + +0.5
4,116,680 - -0.6
4,116,762 + -0.0
4,116,763 - -1.7
4,116,763 - +0.1
4,116,763 - +0.7
4,116,763 - -0.7

Or see this region's nucleotide sequence