Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17940 and AO356_17945 are separated by 101 nucleotides AO356_17945 and AO356_17950 are separated by 2 nucleotides
AO356_17940: AO356_17940 - hypothetical protein, at 4,049,882 to 4,050,826
_17940
AO356_17945: AO356_17945 - cobalamin adenosyltransferase, at 4,050,928 to 4,051,509
_17945
AO356_17950: AO356_17950 - histidine kinase, at 4,051,512 to 4,053,548
_17950
Position (kb)
4050
4051
4052 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4050.275 kb on + strand, within AO356_17940 at 4050.276 kb on - strand, within AO356_17940 at 4050.276 kb on - strand, within AO356_17940 at 4050.363 kb on + strand, within AO356_17940 at 4050.363 kb on + strand, within AO356_17940 at 4050.728 kb on + strand, within AO356_17940 at 4050.728 kb on + strand, within AO356_17940 at 4050.729 kb on - strand, within AO356_17940 at 4050.729 kb on - strand, within AO356_17940 at 4050.729 kb on - strand, within AO356_17940 at 4050.729 kb on - strand, within AO356_17940 at 4050.729 kb on - strand, within AO356_17940 at 4051.035 kb on - strand, within AO356_17945 at 4051.035 kb on - strand, within AO356_17945 at 4051.035 kb on - strand, within AO356_17945 at 4051.244 kb on + strand, within AO356_17945 at 4051.244 kb on + strand, within AO356_17945 at 4051.244 kb on + strand, within AO356_17945 at 4051.245 kb on - strand, within AO356_17945 at 4051.245 kb on - strand, within AO356_17945 at 4051.484 kb on + strand at 4051.649 kb on - strand at 4051.802 kb on + strand, within AO356_17950 at 4051.803 kb on - strand, within AO356_17950 at 4052.435 kb on - strand, within AO356_17950 at 4052.489 kb on + strand, within AO356_17950 at 4052.489 kb on + strand, within AO356_17950 at 4052.489 kb on + strand, within AO356_17950 at 4052.489 kb on + strand, within AO356_17950 at 4052.489 kb on + strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950 at 4052.490 kb on - strand, within AO356_17950
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 4,050,275 + AO356_17940 0.42 +0.7 4,050,276 - AO356_17940 0.42 +0.6 4,050,276 - AO356_17940 0.42 +0.9 4,050,363 + AO356_17940 0.51 -0.3 4,050,363 + AO356_17940 0.51 +0.1 4,050,728 + AO356_17940 0.90 +0.5 4,050,728 + AO356_17940 0.90 +0.4 4,050,729 - AO356_17940 0.90 -1.1 4,050,729 - AO356_17940 0.90 -0.9 4,050,729 - AO356_17940 0.90 -0.5 4,050,729 - AO356_17940 0.90 +0.2 4,050,729 - AO356_17940 0.90 +0.3 4,051,035 - AO356_17945 0.18 +0.5 4,051,035 - AO356_17945 0.18 +0.0 4,051,035 - AO356_17945 0.18 +0.7 4,051,244 + AO356_17945 0.54 -1.2 4,051,244 + AO356_17945 0.54 +0.4 4,051,244 + AO356_17945 0.54 -0.6 4,051,245 - AO356_17945 0.54 +0.9 4,051,245 - AO356_17945 0.54 +0.3 4,051,484 + +0.7 4,051,649 - -1.4 4,051,802 + AO356_17950 0.14 -0.8 4,051,803 - AO356_17950 0.14 -1.3 4,052,435 - AO356_17950 0.45 -1.6 4,052,489 + AO356_17950 0.48 -1.7 4,052,489 + AO356_17950 0.48 -2.7 4,052,489 + AO356_17950 0.48 -2.6 4,052,489 + AO356_17950 0.48 -0.7 4,052,489 + AO356_17950 0.48 -1.4 4,052,490 - AO356_17950 0.48 -0.3 4,052,490 - AO356_17950 0.48 -0.8 4,052,490 - AO356_17950 0.48 -2.1 4,052,490 - AO356_17950 0.48 -2.1 4,052,490 - AO356_17950 0.48 -1.3 4,052,490 - AO356_17950 0.48 -2.9
Or see this region's nucleotide sequence