Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16995 and AO356_17000 are separated by 231 nucleotides AO356_17000 and AO356_17005 are separated by 242 nucleotides
AO356_16995: AO356_16995 - hypothetical protein, at 3,828,350 to 3,829,051
_16995
AO356_17000: AO356_17000 - diguanylate cyclase, at 3,829,283 to 3,830,296
_17000
AO356_17005: AO356_17005 - LysR family transcriptional regulator, at 3,830,539 to 3,831,456
_17005
Position (kb)
3829
3830
3831 Strain fitness (log2 ratio)
-2
-1
0
1 at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.351 kb on + strand at 3828.352 kb on - strand at 3828.352 kb on - strand at 3828.491 kb on + strand, within AO356_16995 at 3828.678 kb on - strand, within AO356_16995 at 3828.678 kb on - strand, within AO356_16995 at 3828.678 kb on - strand, within AO356_16995 at 3828.696 kb on + strand, within AO356_16995 at 3828.729 kb on + strand, within AO356_16995 at 3828.729 kb on + strand, within AO356_16995 at 3828.729 kb on + strand, within AO356_16995 at 3828.729 kb on + strand, within AO356_16995 at 3828.730 kb on - strand, within AO356_16995 at 3828.730 kb on - strand, within AO356_16995 at 3828.730 kb on - strand, within AO356_16995 at 3828.838 kb on - strand, within AO356_16995 at 3828.979 kb on + strand, within AO356_16995 at 3828.996 kb on + strand at 3829.022 kb on + strand at 3829.023 kb on - strand at 3829.063 kb on + strand at 3829.064 kb on - strand at 3829.064 kb on - strand at 3829.064 kb on - strand at 3829.118 kb on - strand at 3829.122 kb on + strand at 3829.122 kb on + strand at 3829.123 kb on - strand at 3829.123 kb on - strand at 3829.123 kb on - strand at 3829.323 kb on + strand at 3829.323 kb on + strand at 3829.324 kb on - strand at 3829.324 kb on - strand at 3829.385 kb on + strand, within AO356_17000 at 3829.386 kb on - strand, within AO356_17000 at 3829.569 kb on - strand, within AO356_17000 at 3829.569 kb on - strand, within AO356_17000 at 3829.569 kb on - strand, within AO356_17000 at 3829.953 kb on + strand, within AO356_17000 at 3829.977 kb on + strand, within AO356_17000 at 3829.977 kb on + strand, within AO356_17000 at 3829.977 kb on + strand, within AO356_17000 at 3829.977 kb on + strand, within AO356_17000 at 3829.978 kb on - strand, within AO356_17000 at 3829.978 kb on - strand, within AO356_17000 at 3829.978 kb on - strand, within AO356_17000 at 3829.978 kb on - strand, within AO356_17000 at 3829.978 kb on - strand, within AO356_17000 at 3830.040 kb on + strand, within AO356_17000 at 3830.071 kb on - strand, within AO356_17000 at 3830.148 kb on + strand, within AO356_17000 at 3830.167 kb on - strand, within AO356_17000 at 3830.234 kb on + strand at 3830.321 kb on - strand at 3830.349 kb on + strand at 3830.349 kb on + strand at 3830.349 kb on + strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.350 kb on - strand at 3830.373 kb on - strand at 3830.373 kb on - strand at 3830.417 kb on + strand at 3830.417 kb on + strand at 3830.418 kb on - strand at 3830.520 kb on - strand at 3830.520 kb on - strand at 3830.563 kb on - strand at 3830.631 kb on - strand, within AO356_17005 at 3830.631 kb on - strand, within AO356_17005 at 3830.631 kb on - strand, within AO356_17005 at 3830.631 kb on - strand, within AO356_17005 at 3830.631 kb on - strand, within AO356_17005 at 3830.663 kb on + strand, within AO356_17005 at 3830.664 kb on - strand, within AO356_17005 at 3830.664 kb on - strand, within AO356_17005 at 3830.664 kb on - strand, within AO356_17005 at 3830.879 kb on + strand, within AO356_17005 at 3830.880 kb on - strand, within AO356_17005 at 3830.948 kb on + strand, within AO356_17005 at 3830.949 kb on - strand, within AO356_17005 at 3830.949 kb on - strand, within AO356_17005 at 3830.949 kb on - strand, within AO356_17005 at 3830.978 kb on + strand, within AO356_17005 at 3830.978 kb on + strand, within AO356_17005 at 3830.978 kb on + strand, within AO356_17005 at 3830.979 kb on - strand, within AO356_17005 at 3830.979 kb on - strand, within AO356_17005 at 3830.979 kb on - strand, within AO356_17005 at 3830.979 kb on - strand, within AO356_17005 at 3831.242 kb on - strand, within AO356_17005 at 3831.242 kb on - strand, within AO356_17005 at 3831.242 kb on - strand, within AO356_17005 at 3831.242 kb on - strand, within AO356_17005 at 3831.242 kb on - strand, within AO356_17005 at 3831.260 kb on + strand, within AO356_17005 at 3831.260 kb on + strand, within AO356_17005 at 3831.261 kb on - strand, within AO356_17005 at 3831.263 kb on + strand, within AO356_17005 at 3831.264 kb on - strand, within AO356_17005 at 3831.264 kb on - strand, within AO356_17005 at 3831.264 kb on - strand, within AO356_17005 at 3831.264 kb on - strand, within AO356_17005 at 3831.264 kb on - strand, within AO356_17005
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,828,351 + -0.2 3,828,351 + -2.1 3,828,351 + +0.7 3,828,351 + -0.2 3,828,351 + -0.2 3,828,351 + +0.3 3,828,351 + +0.9 3,828,352 - -0.3 3,828,352 - -0.9 3,828,491 + AO356_16995 0.20 +0.8 3,828,678 - AO356_16995 0.47 -0.2 3,828,678 - AO356_16995 0.47 +0.4 3,828,678 - AO356_16995 0.47 +0.3 3,828,696 + AO356_16995 0.49 +0.5 3,828,729 + AO356_16995 0.54 +0.6 3,828,729 + AO356_16995 0.54 +0.5 3,828,729 + AO356_16995 0.54 +0.3 3,828,729 + AO356_16995 0.54 -0.2 3,828,730 - AO356_16995 0.54 -1.3 3,828,730 - AO356_16995 0.54 -1.8 3,828,730 - AO356_16995 0.54 -0.1 3,828,838 - AO356_16995 0.70 +0.5 3,828,979 + AO356_16995 0.90 +0.8 3,828,996 + +0.1 3,829,022 + +1.0 3,829,023 - +0.6 3,829,063 + +0.9 3,829,064 - -0.3 3,829,064 - -0.8 3,829,064 - -0.1 3,829,118 - -0.3 3,829,122 + -0.2 3,829,122 + +0.3 3,829,123 - +0.5 3,829,123 - +0.8 3,829,123 - +0.7 3,829,323 + +0.0 3,829,323 + -0.1 3,829,324 - +0.8 3,829,324 - -0.2 3,829,385 + AO356_17000 0.10 -0.0 3,829,386 - AO356_17000 0.10 -1.1 3,829,569 - AO356_17000 0.28 +0.4 3,829,569 - AO356_17000 0.28 +0.6 3,829,569 - AO356_17000 0.28 +0.1 3,829,953 + AO356_17000 0.66 +0.2 3,829,977 + AO356_17000 0.68 -0.7 3,829,977 + AO356_17000 0.68 +0.4 3,829,977 + AO356_17000 0.68 +0.2 3,829,977 + AO356_17000 0.68 -0.8 3,829,978 - AO356_17000 0.69 +0.2 3,829,978 - AO356_17000 0.69 +0.2 3,829,978 - AO356_17000 0.69 +0.5 3,829,978 - AO356_17000 0.69 +0.6 3,829,978 - AO356_17000 0.69 +0.4 3,830,040 + AO356_17000 0.75 -0.9 3,830,071 - AO356_17000 0.78 -0.6 3,830,148 + AO356_17000 0.85 +0.6 3,830,167 - AO356_17000 0.87 -1.0 3,830,234 + +0.4 3,830,321 - -0.1 3,830,349 + -0.5 3,830,349 + +0.8 3,830,349 + +0.2 3,830,350 - +0.5 3,830,350 - -0.4 3,830,350 - -0.7 3,830,350 - +0.8 3,830,350 - +0.3 3,830,350 - +0.2 3,830,350 - +0.1 3,830,373 - +0.9 3,830,373 - +0.9 3,830,417 + +0.3 3,830,417 + -0.2 3,830,418 - +0.8 3,830,520 - +0.6 3,830,520 - +0.4 3,830,563 - +1.6 3,830,631 - AO356_17005 0.10 +0.3 3,830,631 - AO356_17005 0.10 -0.1 3,830,631 - AO356_17005 0.10 +0.3 3,830,631 - AO356_17005 0.10 -0.4 3,830,631 - AO356_17005 0.10 +1.6 3,830,663 + AO356_17005 0.14 -0.5 3,830,664 - AO356_17005 0.14 +0.7 3,830,664 - AO356_17005 0.14 -0.2 3,830,664 - AO356_17005 0.14 +0.8 3,830,879 + AO356_17005 0.37 +1.0 3,830,880 - AO356_17005 0.37 +0.7 3,830,948 + AO356_17005 0.45 +0.1 3,830,949 - AO356_17005 0.45 -1.4 3,830,949 - AO356_17005 0.45 -0.2 3,830,949 - AO356_17005 0.45 +0.8 3,830,978 + AO356_17005 0.48 +0.3 3,830,978 + AO356_17005 0.48 -0.3 3,830,978 + AO356_17005 0.48 +0.1 3,830,979 - AO356_17005 0.48 +0.1 3,830,979 - AO356_17005 0.48 -0.0 3,830,979 - AO356_17005 0.48 -0.8 3,830,979 - AO356_17005 0.48 -0.3 3,831,242 - AO356_17005 0.77 +0.0 3,831,242 - AO356_17005 0.77 +0.5 3,831,242 - AO356_17005 0.77 -1.3 3,831,242 - AO356_17005 0.77 -0.0 3,831,242 - AO356_17005 0.77 +0.2 3,831,260 + AO356_17005 0.79 -1.9 3,831,260 + AO356_17005 0.79 -0.4 3,831,261 - AO356_17005 0.79 +0.1 3,831,263 + AO356_17005 0.79 -1.0 3,831,264 - AO356_17005 0.79 +0.5 3,831,264 - AO356_17005 0.79 -0.2 3,831,264 - AO356_17005 0.79 +0.6 3,831,264 - AO356_17005 0.79 +0.5 3,831,264 - AO356_17005 0.79 -0.8
Or see this region's nucleotide sequence