Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21363 and SM_b21364 are separated by 8 nucleotides SM_b21364 and SM_b21365 overlap by 8 nucleotides SM_b21365 and SM_b21669 overlap by 19 nucleotides SM_b21669 and SM_b21366 are separated by 40 nucleotides
SM_b21363: SM_b21363 - hypothetical protein, at 1,026,537 to 1,027,631
_b21363
SM_b21364: SM_b21364 - membrane-anchored oxidoreductase, L-sorbosone dehydrogenase, at 1,027,640 to 1,029,193
_b21364
SM_b21365: SM_b21365 - hypothetical protein, at 1,029,186 to 1,029,638
_b21365
SM_b21669: SM_b21669 - hypothetical protein, at 1,029,620 to 1,029,847
_b21669
SM_b21366: SM_b21366 - hypothetical protein, at 1,029,888 to 1,030,469
_b21366
Position (kb)
1027
1028
1029
1030 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1026.823 kb on - strand, within SM_b21363 at 1026.823 kb on - strand, within SM_b21363 at 1026.839 kb on - strand, within SM_b21363 at 1026.870 kb on + strand, within SM_b21363 at 1026.871 kb on - strand, within SM_b21363 at 1026.871 kb on - strand, within SM_b21363 at 1026.911 kb on + strand, within SM_b21363 at 1026.911 kb on + strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1026.912 kb on - strand, within SM_b21363 at 1027.015 kb on + strand, within SM_b21363 at 1027.083 kb on - strand, within SM_b21363 at 1027.083 kb on - strand, within SM_b21363 at 1027.253 kb on - strand, within SM_b21363 at 1027.303 kb on - strand, within SM_b21363 at 1027.346 kb on + strand, within SM_b21363 at 1027.405 kb on - strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.407 kb on + strand, within SM_b21363 at 1027.428 kb on + strand, within SM_b21363 at 1027.428 kb on + strand, within SM_b21363 at 1027.429 kb on - strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.440 kb on + strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.441 kb on - strand, within SM_b21363 at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.596 kb on + strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.597 kb on - strand at 1027.630 kb on - strand at 1027.641 kb on + strand at 1027.641 kb on + strand at 1027.729 kb on + strand at 1027.730 kb on - strand at 1028.028 kb on + strand, within SM_b21364 at 1028.028 kb on + strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.029 kb on - strand, within SM_b21364 at 1028.040 kb on + strand, within SM_b21364 at 1028.041 kb on - strand, within SM_b21364 at 1028.041 kb on - strand, within SM_b21364 at 1028.081 kb on + strand, within SM_b21364 at 1028.082 kb on - strand, within SM_b21364 at 1028.170 kb on - strand, within SM_b21364 at 1028.170 kb on - strand, within SM_b21364 at 1028.244 kb on + strand, within SM_b21364 at 1028.244 kb on + strand, within SM_b21364 at 1028.245 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.263 kb on - strand, within SM_b21364 at 1028.433 kb on - strand, within SM_b21364 at 1028.433 kb on - strand, within SM_b21364 at 1028.484 kb on - strand, within SM_b21364 at 1028.511 kb on + strand, within SM_b21364 at 1028.512 kb on - strand, within SM_b21364 at 1028.587 kb on + strand, within SM_b21364 at 1028.631 kb on + strand, within SM_b21364 at 1028.637 kb on + strand, within SM_b21364 at 1028.638 kb on - strand, within SM_b21364 at 1028.667 kb on + strand, within SM_b21364 at 1028.667 kb on + strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.668 kb on - strand, within SM_b21364 at 1028.921 kb on - strand, within SM_b21364 at 1029.187 kb on + strand at 1029.187 kb on + strand at 1029.187 kb on + strand at 1029.188 kb on - strand at 1029.441 kb on + strand, within SM_b21365 at 1029.442 kb on - strand, within SM_b21365 at 1029.554 kb on + strand, within SM_b21365 at 1029.682 kb on + strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.683 kb on - strand, within SM_b21669 at 1029.908 kb on + strand at 1029.908 kb on + strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.909 kb on - strand at 1029.920 kb on + strand at 1029.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 1,026,823 - SM_b21363 0.26 -0.7 1,026,823 - SM_b21363 0.26 -0.0 1,026,839 - SM_b21363 0.28 +0.6 1,026,870 + SM_b21363 0.30 +0.8 1,026,871 - SM_b21363 0.31 -0.1 1,026,871 - SM_b21363 0.31 +0.9 1,026,911 + SM_b21363 0.34 -0.2 1,026,911 + SM_b21363 0.34 +0.1 1,026,912 - SM_b21363 0.34 +0.1 1,026,912 - SM_b21363 0.34 -0.5 1,026,912 - SM_b21363 0.34 +1.4 1,027,015 + SM_b21363 0.44 -0.5 1,027,083 - SM_b21363 0.50 -0.6 1,027,083 - SM_b21363 0.50 +1.2 1,027,253 - SM_b21363 0.65 +0.4 1,027,303 - SM_b21363 0.70 -0.4 1,027,346 + SM_b21363 0.74 +0.9 1,027,405 - SM_b21363 0.79 +0.5 1,027,407 + SM_b21363 0.79 -1.4 1,027,407 + SM_b21363 0.79 -0.2 1,027,407 + SM_b21363 0.79 -0.0 1,027,407 + SM_b21363 0.79 +0.6 1,027,428 + SM_b21363 0.81 +0.5 1,027,428 + SM_b21363 0.81 -0.6 1,027,429 - SM_b21363 0.81 -1.1 1,027,440 + SM_b21363 0.82 +0.1 1,027,440 + SM_b21363 0.82 +0.3 1,027,440 + SM_b21363 0.82 -0.6 1,027,440 + SM_b21363 0.82 -0.1 1,027,441 - SM_b21363 0.83 +0.7 1,027,441 - SM_b21363 0.83 +1.2 1,027,441 - SM_b21363 0.83 +0.7 1,027,596 + -0.3 1,027,596 + +0.3 1,027,596 + +0.4 1,027,596 + -0.0 1,027,597 - -1.0 1,027,597 - -0.7 1,027,597 - +0.4 1,027,597 - -0.3 1,027,597 - -0.5 1,027,597 - +0.3 1,027,630 - -0.1 1,027,641 + -0.1 1,027,641 + -0.6 1,027,729 + -0.4 1,027,730 - +0.1 1,028,028 + SM_b21364 0.25 -1.4 1,028,028 + SM_b21364 0.25 +0.8 1,028,029 - SM_b21364 0.25 -1.4 1,028,029 - SM_b21364 0.25 +0.3 1,028,029 - SM_b21364 0.25 +0.3 1,028,040 + SM_b21364 0.26 -0.4 1,028,041 - SM_b21364 0.26 -1.5 1,028,041 - SM_b21364 0.26 +0.7 1,028,081 + SM_b21364 0.28 +0.7 1,028,082 - SM_b21364 0.28 -0.1 1,028,170 - SM_b21364 0.34 +0.3 1,028,170 - SM_b21364 0.34 -0.1 1,028,244 + SM_b21364 0.39 -0.2 1,028,244 + SM_b21364 0.39 +0.6 1,028,245 - SM_b21364 0.39 -1.0 1,028,263 - SM_b21364 0.40 -0.9 1,028,263 - SM_b21364 0.40 -1.7 1,028,263 - SM_b21364 0.40 +0.4 1,028,263 - SM_b21364 0.40 -0.9 1,028,263 - SM_b21364 0.40 -0.7 1,028,433 - SM_b21364 0.51 -0.1 1,028,433 - SM_b21364 0.51 +0.3 1,028,484 - SM_b21364 0.54 -1.2 1,028,511 + SM_b21364 0.56 -0.8 1,028,512 - SM_b21364 0.56 +0.0 1,028,587 + SM_b21364 0.61 -0.5 1,028,631 + SM_b21364 0.64 -0.4 1,028,637 + SM_b21364 0.64 -0.3 1,028,638 - SM_b21364 0.64 -0.9 1,028,667 + SM_b21364 0.66 +0.3 1,028,667 + SM_b21364 0.66 -1.2 1,028,668 - SM_b21364 0.66 -0.5 1,028,668 - SM_b21364 0.66 -0.6 1,028,668 - SM_b21364 0.66 -0.6 1,028,668 - SM_b21364 0.66 +1.3 1,028,668 - SM_b21364 0.66 -1.3 1,028,921 - SM_b21364 0.82 +0.2 1,029,187 + -2.3 1,029,187 + +0.3 1,029,187 + +0.6 1,029,188 - -0.5 1,029,441 + SM_b21365 0.56 -0.3 1,029,442 - SM_b21365 0.57 +0.4 1,029,554 + SM_b21365 0.81 +1.5 1,029,682 + SM_b21669 0.27 -0.2 1,029,683 - SM_b21669 0.28 +0.4 1,029,683 - SM_b21669 0.28 +0.9 1,029,683 - SM_b21669 0.28 +1.2 1,029,908 + -0.3 1,029,908 + +1.8 1,029,909 - +0.3 1,029,909 - +0.1 1,029,909 - -0.3 1,029,909 - +0.5 1,029,909 - +0.4 1,029,920 + -0.1 1,029,921 - +0.4
Or see this region's nucleotide sequence