Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20359 and SM_b20360 are separated by 40 nucleotides SM_b20360 and SM_b20361 are separated by 85 nucleotides SM_b20361 and SM_b20362 are separated by 90 nucleotides
SM_b20359: SM_b20359 - hypothetical protein, at 369,491 to 370,786
_b20359
SM_b20360: SM_b20360 - hypothetical protein, at 370,827 to 371,558
_b20360
SM_b20361: SM_b20361 - ionic voltage-gated channel protein, at 371,644 to 372,441
_b20361
SM_b20362: SM_b20362 - inositol monophosphatase, at 372,532 to 373,332
_b20362
Position (kb) 370
371
372 Strain fitness (log2 ratio) -2
-1
0
1
2 at 369.872 kb on + strand, within SM_b20359 at 369.872 kb on + strand, within SM_b20359 at 369.873 kb on - strand, within SM_b20359 at 369.873 kb on - strand, within SM_b20359 at 370.023 kb on + strand, within SM_b20359 at 370.024 kb on - strand, within SM_b20359 at 370.078 kb on - strand, within SM_b20359 at 370.214 kb on - strand, within SM_b20359 at 370.694 kb on - strand at 370.694 kb on - strand at 370.695 kb on + strand at 370.696 kb on - strand at 370.696 kb on - strand at 370.696 kb on - strand at 371.063 kb on - strand, within SM_b20360 at 371.136 kb on + strand, within SM_b20360 at 371.136 kb on + strand, within SM_b20360 at 371.137 kb on - strand, within SM_b20360 at 371.481 kb on + strand, within SM_b20360 at 371.482 kb on - strand, within SM_b20360 at 371.485 kb on - strand at 371.538 kb on - strand at 371.556 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.590 kb on + strand at 371.591 kb on - strand at 371.663 kb on - strand at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.753 kb on + strand, within SM_b20361 at 371.794 kb on + strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.895 kb on - strand, within SM_b20361 at 371.934 kb on - strand, within SM_b20361 at 371.948 kb on + strand, within SM_b20361 at 372.245 kb on + strand, within SM_b20361 at 372.261 kb on - strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.319 kb on + strand, within SM_b20361 at 372.435 kb on + strand at 372.436 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 369,872 + SM_b20359 0.29 -0.8 369,872 + SM_b20359 0.29 -0.2 369,873 - SM_b20359 0.29 +0.0 369,873 - SM_b20359 0.29 -0.1 370,023 + SM_b20359 0.41 -0.2 370,024 - SM_b20359 0.41 +0.1 370,078 - SM_b20359 0.45 -1.7 370,214 - SM_b20359 0.56 -0.2 370,694 - +0.3 370,694 - +0.4 370,695 + -0.9 370,696 - -0.3 370,696 - +0.3 370,696 - -1.4 371,063 - SM_b20360 0.32 -0.0 371,136 + SM_b20360 0.42 -0.8 371,136 + SM_b20360 0.42 -0.6 371,137 - SM_b20360 0.42 -0.3 371,481 + SM_b20360 0.89 -1.1 371,482 - SM_b20360 0.89 -1.0 371,485 - -1.6 371,538 - -0.5 371,556 + +1.0 371,590 + -0.3 371,590 + +0.0 371,590 + +2.2 371,591 - -1.0 371,663 - +0.9 371,753 + SM_b20361 0.14 -0.2 371,753 + SM_b20361 0.14 -0.3 371,753 + SM_b20361 0.14 -0.6 371,794 + SM_b20361 0.19 -0.3 371,895 - SM_b20361 0.31 -0.1 371,895 - SM_b20361 0.31 -0.0 371,934 - SM_b20361 0.36 -2.0 371,948 + SM_b20361 0.38 -0.2 372,245 + SM_b20361 0.75 -0.4 372,261 - SM_b20361 0.77 +0.6 372,319 + SM_b20361 0.85 -0.3 372,319 + SM_b20361 0.85 -0.1 372,319 + SM_b20361 0.85 -2.5 372,435 + +0.2 372,436 - -0.2
Or see this region's nucleotide sequence