Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16195 and ABZR87_RS16200 are separated by 82 nucleotides ABZR87_RS16200 and ABZR87_RS16205 are separated by 35 nucleotides ABZR87_RS16205 and ABZR87_RS16210 are separated by 23 nucleotides ABZR87_RS16210 and ABZR87_RS16215 overlap by 4 nucleotides ABZR87_RS16215 and ABZR87_RS16220 are separated by 16 nucleotides
ABZR87_RS16195: ABZR87_RS16195 - superoxide dismutase family protein, at 3,427,313 to 3,427,864
_RS16195
ABZR87_RS16200: ABZR87_RS16200 - hypothetical protein, at 3,427,947 to 3,428,264
_RS16200
ABZR87_RS16205: ABZR87_RS16205 - formate dehydrogenase subunit gamma, at 3,428,300 to 3,429,463
_RS16205
ABZR87_RS16210: ABZR87_RS16210 - hypothetical protein, at 3,429,487 to 3,429,732
_RS16210
ABZR87_RS16215: ABZR87_RS16215 - formate dehydrogenase FDH3 subunit beta, at 3,429,729 to 3,430,397
_RS16215
ABZR87_RS16220: ABZR87_RS16220 - molybdopterin-dependent oxidoreductase, at 3,430,414 to 3,433,419
_RS16220
Position (kb)
3428
3429
3430 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.377 kb on + strand, within ABZR87_RS16195 at 3427.378 kb on - strand, within ABZR87_RS16195 at 3427.378 kb on - strand, within ABZR87_RS16195 at 3427.378 kb on - strand, within ABZR87_RS16195 at 3427.378 kb on - strand, within ABZR87_RS16195 at 3427.378 kb on - strand, within ABZR87_RS16195 at 3427.582 kb on + strand, within ABZR87_RS16195 at 3427.582 kb on + strand, within ABZR87_RS16195 at 3427.582 kb on + strand, within ABZR87_RS16195 at 3427.660 kb on + strand, within ABZR87_RS16195 at 3427.661 kb on - strand, within ABZR87_RS16195 at 3427.908 kb on - strand at 3428.030 kb on + strand, within ABZR87_RS16200 at 3428.030 kb on + strand, within ABZR87_RS16200 at 3428.030 kb on + strand, within ABZR87_RS16200 at 3428.031 kb on - strand, within ABZR87_RS16200 at 3428.031 kb on - strand, within ABZR87_RS16200 at 3428.031 kb on - strand, within ABZR87_RS16200 at 3428.057 kb on - strand, within ABZR87_RS16200 at 3428.057 kb on - strand, within ABZR87_RS16200 at 3428.057 kb on - strand, within ABZR87_RS16200 at 3428.231 kb on + strand, within ABZR87_RS16200 at 3428.232 kb on - strand, within ABZR87_RS16200 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.481 kb on + strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.482 kb on - strand, within ABZR87_RS16205 at 3428.562 kb on + strand, within ABZR87_RS16205 at 3428.562 kb on + strand, within ABZR87_RS16205 at 3428.563 kb on - strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.565 kb on + strand, within ABZR87_RS16205 at 3428.566 kb on - strand, within ABZR87_RS16205 at 3428.566 kb on - strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.844 kb on + strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.845 kb on - strand, within ABZR87_RS16205 at 3428.964 kb on + strand, within ABZR87_RS16205 at 3429.180 kb on + strand, within ABZR87_RS16205 at 3429.341 kb on + strand, within ABZR87_RS16205 at 3429.342 kb on - strand, within ABZR87_RS16205 at 3429.503 kb on + strand at 3429.503 kb on + strand at 3429.503 kb on + strand at 3429.503 kb on + strand at 3429.504 kb on - strand at 3429.504 kb on - strand at 3429.504 kb on - strand at 3429.515 kb on + strand, within ABZR87_RS16210 at 3429.515 kb on + strand, within ABZR87_RS16210 at 3429.515 kb on + strand, within ABZR87_RS16210 at 3429.516 kb on - strand, within ABZR87_RS16210 at 3429.608 kb on + strand, within ABZR87_RS16210 at 3429.608 kb on + strand, within ABZR87_RS16210 at 3429.608 kb on + strand, within ABZR87_RS16210 at 3429.609 kb on - strand, within ABZR87_RS16210 at 3429.609 kb on - strand, within ABZR87_RS16210 at 3429.609 kb on - strand, within ABZR87_RS16210 at 3429.820 kb on + strand, within ABZR87_RS16215 at 3429.982 kb on + strand, within ABZR87_RS16215 at 3429.983 kb on - strand, within ABZR87_RS16215 at 3429.983 kb on - strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.111 kb on + strand, within ABZR87_RS16215 at 3430.112 kb on - strand, within ABZR87_RS16215 at 3430.112 kb on - strand, within ABZR87_RS16215 at 3430.112 kb on - strand, within ABZR87_RS16215 at 3430.112 kb on - strand, within ABZR87_RS16215 at 3430.112 kb on - strand, within ABZR87_RS16215 at 3430.120 kb on + strand, within ABZR87_RS16215 at 3430.121 kb on - strand, within ABZR87_RS16215 at 3430.121 kb on - strand, within ABZR87_RS16215 at 3430.177 kb on + strand, within ABZR87_RS16215 at 3430.178 kb on - strand, within ABZR87_RS16215 at 3430.415 kb on + strand at 3430.415 kb on + strand at 3430.416 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 3,427,377 + ABZR87_RS16195 0.12 -0.4 3,427,377 + ABZR87_RS16195 0.12 +0.3 3,427,377 + ABZR87_RS16195 0.12 +0.2 3,427,377 + ABZR87_RS16195 0.12 -0.7 3,427,377 + ABZR87_RS16195 0.12 -0.3 3,427,377 + ABZR87_RS16195 0.12 +0.2 3,427,377 + ABZR87_RS16195 0.12 -0.6 3,427,377 + ABZR87_RS16195 0.12 -1.3 3,427,378 - ABZR87_RS16195 0.12 -0.1 3,427,378 - ABZR87_RS16195 0.12 -0.4 3,427,378 - ABZR87_RS16195 0.12 -0.4 3,427,378 - ABZR87_RS16195 0.12 +0.1 3,427,378 - ABZR87_RS16195 0.12 -1.1 3,427,582 + ABZR87_RS16195 0.49 -0.3 3,427,582 + ABZR87_RS16195 0.49 +0.2 3,427,582 + ABZR87_RS16195 0.49 +0.2 3,427,660 + ABZR87_RS16195 0.63 -1.2 3,427,661 - ABZR87_RS16195 0.63 -1.0 3,427,908 - -0.4 3,428,030 + ABZR87_RS16200 0.26 -0.5 3,428,030 + ABZR87_RS16200 0.26 -0.7 3,428,030 + ABZR87_RS16200 0.26 +0.3 3,428,031 - ABZR87_RS16200 0.26 -0.1 3,428,031 - ABZR87_RS16200 0.26 -0.2 3,428,031 - ABZR87_RS16200 0.26 -1.9 3,428,057 - ABZR87_RS16200 0.35 -1.5 3,428,057 - ABZR87_RS16200 0.35 -1.2 3,428,057 - ABZR87_RS16200 0.35 +0.5 3,428,231 + ABZR87_RS16200 0.89 -0.3 3,428,232 - ABZR87_RS16200 0.90 -0.3 3,428,481 + ABZR87_RS16205 0.16 -0.1 3,428,481 + ABZR87_RS16205 0.16 +0.7 3,428,481 + ABZR87_RS16205 0.16 +0.1 3,428,481 + ABZR87_RS16205 0.16 +0.3 3,428,481 + ABZR87_RS16205 0.16 -0.1 3,428,481 + ABZR87_RS16205 0.16 +0.4 3,428,481 + ABZR87_RS16205 0.16 -0.3 3,428,481 + ABZR87_RS16205 0.16 -1.5 3,428,481 + ABZR87_RS16205 0.16 -0.8 3,428,481 + ABZR87_RS16205 0.16 -3.6 3,428,481 + ABZR87_RS16205 0.16 -0.5 3,428,481 + ABZR87_RS16205 0.16 -0.2 3,428,481 + ABZR87_RS16205 0.16 -1.1 3,428,481 + ABZR87_RS16205 0.16 -0.3 3,428,481 + ABZR87_RS16205 0.16 -0.6 3,428,481 + ABZR87_RS16205 0.16 -0.5 3,428,481 + ABZR87_RS16205 0.16 +0.2 3,428,481 + ABZR87_RS16205 0.16 +0.3 3,428,482 - ABZR87_RS16205 0.16 +0.5 3,428,482 - ABZR87_RS16205 0.16 -0.3 3,428,482 - ABZR87_RS16205 0.16 -0.1 3,428,482 - ABZR87_RS16205 0.16 +0.4 3,428,482 - ABZR87_RS16205 0.16 +0.7 3,428,482 - ABZR87_RS16205 0.16 +0.2 3,428,482 - ABZR87_RS16205 0.16 -0.1 3,428,482 - ABZR87_RS16205 0.16 -0.5 3,428,482 - ABZR87_RS16205 0.16 -0.4 3,428,482 - ABZR87_RS16205 0.16 -0.0 3,428,482 - ABZR87_RS16205 0.16 -0.0 3,428,562 + ABZR87_RS16205 0.23 -0.1 3,428,562 + ABZR87_RS16205 0.23 +1.3 3,428,563 - ABZR87_RS16205 0.23 -0.4 3,428,565 + ABZR87_RS16205 0.23 -0.3 3,428,565 + ABZR87_RS16205 0.23 -0.3 3,428,565 + ABZR87_RS16205 0.23 -0.1 3,428,565 + ABZR87_RS16205 0.23 -0.0 3,428,565 + ABZR87_RS16205 0.23 -0.3 3,428,565 + ABZR87_RS16205 0.23 +0.1 3,428,566 - ABZR87_RS16205 0.23 -0.7 3,428,566 - ABZR87_RS16205 0.23 -0.6 3,428,844 + ABZR87_RS16205 0.47 -0.3 3,428,844 + ABZR87_RS16205 0.47 +0.3 3,428,844 + ABZR87_RS16205 0.47 +0.2 3,428,844 + ABZR87_RS16205 0.47 +0.1 3,428,844 + ABZR87_RS16205 0.47 -0.4 3,428,844 + ABZR87_RS16205 0.47 -0.3 3,428,844 + ABZR87_RS16205 0.47 -0.9 3,428,844 + ABZR87_RS16205 0.47 +0.4 3,428,845 - ABZR87_RS16205 0.47 -0.2 3,428,845 - ABZR87_RS16205 0.47 -0.4 3,428,845 - ABZR87_RS16205 0.47 +0.2 3,428,845 - ABZR87_RS16205 0.47 -0.2 3,428,845 - ABZR87_RS16205 0.47 -0.7 3,428,845 - ABZR87_RS16205 0.47 -0.4 3,428,845 - ABZR87_RS16205 0.47 -0.8 3,428,845 - ABZR87_RS16205 0.47 -1.4 3,428,845 - ABZR87_RS16205 0.47 -0.4 3,428,845 - ABZR87_RS16205 0.47 -0.1 3,428,845 - ABZR87_RS16205 0.47 -0.4 3,428,845 - ABZR87_RS16205 0.47 +0.5 3,428,845 - ABZR87_RS16205 0.47 -0.2 3,428,964 + ABZR87_RS16205 0.57 +0.3 3,429,180 + ABZR87_RS16205 0.76 -0.7 3,429,341 + ABZR87_RS16205 0.89 -0.4 3,429,342 - ABZR87_RS16205 0.90 -1.0 3,429,503 + -0.9 3,429,503 + -0.6 3,429,503 + -0.1 3,429,503 + +0.0 3,429,504 - +0.2 3,429,504 - +1.0 3,429,504 - +0.4 3,429,515 + ABZR87_RS16210 0.11 +0.0 3,429,515 + ABZR87_RS16210 0.11 +0.5 3,429,515 + ABZR87_RS16210 0.11 +0.7 3,429,516 - ABZR87_RS16210 0.12 -0.4 3,429,608 + ABZR87_RS16210 0.49 -0.7 3,429,608 + ABZR87_RS16210 0.49 -0.9 3,429,608 + ABZR87_RS16210 0.49 +0.4 3,429,609 - ABZR87_RS16210 0.50 -0.3 3,429,609 - ABZR87_RS16210 0.50 -1.3 3,429,609 - ABZR87_RS16210 0.50 +1.0 3,429,820 + ABZR87_RS16215 0.14 -0.9 3,429,982 + ABZR87_RS16215 0.38 -0.2 3,429,983 - ABZR87_RS16215 0.38 -0.5 3,429,983 - ABZR87_RS16215 0.38 -0.2 3,430,111 + ABZR87_RS16215 0.57 +0.1 3,430,111 + ABZR87_RS16215 0.57 -0.5 3,430,111 + ABZR87_RS16215 0.57 -0.6 3,430,111 + ABZR87_RS16215 0.57 -0.9 3,430,111 + ABZR87_RS16215 0.57 +0.2 3,430,111 + ABZR87_RS16215 0.57 -0.3 3,430,111 + ABZR87_RS16215 0.57 +0.5 3,430,112 - ABZR87_RS16215 0.57 +0.0 3,430,112 - ABZR87_RS16215 0.57 -0.0 3,430,112 - ABZR87_RS16215 0.57 -0.4 3,430,112 - ABZR87_RS16215 0.57 -1.2 3,430,112 - ABZR87_RS16215 0.57 +0.2 3,430,120 + ABZR87_RS16215 0.58 +0.1 3,430,121 - ABZR87_RS16215 0.59 -0.2 3,430,121 - ABZR87_RS16215 0.59 -0.3 3,430,177 + ABZR87_RS16215 0.67 -0.4 3,430,178 - ABZR87_RS16215 0.67 +0.1 3,430,415 + +1.7 3,430,415 + +0.0 3,430,416 - -0.5
Or see this region's nucleotide sequence