Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10780 and ABZR87_RS10785 overlap by 4 nucleotides ABZR87_RS10785 and ABZR87_RS10795 are separated by 278 nucleotides
ABZR87_RS10780: ABZR87_RS10780 - PD-(D/E)XK nuclease family protein, at 2,280,407 to 2,283,250
_RS10780
ABZR87_RS10785: ABZR87_RS10785 - exodeoxyribonuclease V subunit beta, at 2,283,247 to 2,286,768
_RS10785
ABZR87_RS10795: ABZR87_RS10795 - DNA polymerase III subunit gamma/tau, at 2,287,047 to 2,289,251
_RS10795
Position (kb)
2283
2284
2285
2286
2287 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2282.351 kb on - strand, within ABZR87_RS10780 at 2282.454 kb on - strand, within ABZR87_RS10780 at 2282.454 kb on - strand, within ABZR87_RS10780 at 2282.709 kb on - strand, within ABZR87_RS10780 at 2282.709 kb on - strand, within ABZR87_RS10780 at 2282.738 kb on + strand, within ABZR87_RS10780 at 2282.806 kb on + strand, within ABZR87_RS10780 at 2282.807 kb on - strand, within ABZR87_RS10780 at 2282.976 kb on - strand at 2283.206 kb on + strand at 2283.206 kb on + strand at 2283.262 kb on + strand at 2283.262 kb on + strand at 2283.595 kb on + strand at 2283.802 kb on + strand, within ABZR87_RS10785 at 2283.890 kb on - strand, within ABZR87_RS10785 at 2284.360 kb on + strand, within ABZR87_RS10785 at 2284.370 kb on - strand, within ABZR87_RS10785 at 2284.480 kb on + strand, within ABZR87_RS10785 at 2284.481 kb on - strand, within ABZR87_RS10785 at 2284.481 kb on - strand, within ABZR87_RS10785 at 2284.481 kb on - strand, within ABZR87_RS10785 at 2284.755 kb on - strand, within ABZR87_RS10785 at 2284.783 kb on + strand, within ABZR87_RS10785 at 2284.792 kb on + strand, within ABZR87_RS10785 at 2284.793 kb on - strand, within ABZR87_RS10785 at 2284.943 kb on - strand, within ABZR87_RS10785 at 2285.069 kb on - strand, within ABZR87_RS10785 at 2285.114 kb on - strand, within ABZR87_RS10785 at 2285.502 kb on - strand, within ABZR87_RS10785 at 2285.502 kb on - strand, within ABZR87_RS10785 at 2285.702 kb on + strand, within ABZR87_RS10785 at 2285.703 kb on - strand, within ABZR87_RS10785 at 2285.708 kb on + strand, within ABZR87_RS10785 at 2285.717 kb on + strand, within ABZR87_RS10785 at 2285.717 kb on + strand, within ABZR87_RS10785 at 2285.717 kb on + strand, within ABZR87_RS10785 at 2285.717 kb on + strand, within ABZR87_RS10785 at 2285.717 kb on + strand, within ABZR87_RS10785 at 2285.718 kb on - strand, within ABZR87_RS10785 at 2285.718 kb on - strand, within ABZR87_RS10785 at 2285.718 kb on - strand, within ABZR87_RS10785 at 2285.718 kb on - strand, within ABZR87_RS10785 at 2285.718 kb on - strand, within ABZR87_RS10785 at 2285.941 kb on + strand, within ABZR87_RS10785 at 2286.067 kb on + strand, within ABZR87_RS10785 at 2286.068 kb on - strand, within ABZR87_RS10785 at 2286.068 kb on - strand, within ABZR87_RS10785 at 2286.166 kb on + strand, within ABZR87_RS10785 at 2286.167 kb on - strand, within ABZR87_RS10785 at 2286.481 kb on - strand at 2286.568 kb on + strand at 2286.576 kb on - strand at 2286.576 kb on - strand at 2286.576 kb on - strand at 2286.626 kb on - strand at 2286.649 kb on + strand at 2286.933 kb on + strand at 2286.933 kb on + strand at 2286.933 kb on + strand at 2286.960 kb on + strand at 2286.960 kb on + strand at 2286.961 kb on - strand at 2287.034 kb on + strand at 2287.035 kb on - strand at 2287.053 kb on + strand at 2287.053 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 2,282,351 - ABZR87_RS10780 0.68 -0.8 2,282,454 - ABZR87_RS10780 0.72 +0.0 2,282,454 - ABZR87_RS10780 0.72 +0.5 2,282,709 - ABZR87_RS10780 0.81 -1.3 2,282,709 - ABZR87_RS10780 0.81 -2.1 2,282,738 + ABZR87_RS10780 0.82 +0.0 2,282,806 + ABZR87_RS10780 0.84 +0.2 2,282,807 - ABZR87_RS10780 0.84 +2.0 2,282,976 - +2.0 2,283,206 + -0.5 2,283,206 + +0.1 2,283,262 + -0.1 2,283,262 + +0.1 2,283,595 + -1.1 2,283,802 + ABZR87_RS10785 0.16 -1.0 2,283,890 - ABZR87_RS10785 0.18 +0.0 2,284,360 + ABZR87_RS10785 0.32 -1.7 2,284,370 - ABZR87_RS10785 0.32 -0.8 2,284,480 + ABZR87_RS10785 0.35 +0.0 2,284,481 - ABZR87_RS10785 0.35 -0.8 2,284,481 - ABZR87_RS10785 0.35 +0.8 2,284,481 - ABZR87_RS10785 0.35 -1.6 2,284,755 - ABZR87_RS10785 0.43 -1.0 2,284,783 + ABZR87_RS10785 0.44 +0.7 2,284,792 + ABZR87_RS10785 0.44 +0.4 2,284,793 - ABZR87_RS10785 0.44 -1.1 2,284,943 - ABZR87_RS10785 0.48 +1.0 2,285,069 - ABZR87_RS10785 0.52 -1.0 2,285,114 - ABZR87_RS10785 0.53 -1.4 2,285,502 - ABZR87_RS10785 0.64 -1.3 2,285,502 - ABZR87_RS10785 0.64 +2.0 2,285,702 + ABZR87_RS10785 0.70 -2.0 2,285,703 - ABZR87_RS10785 0.70 +0.0 2,285,708 + ABZR87_RS10785 0.70 -0.6 2,285,717 + ABZR87_RS10785 0.70 +0.8 2,285,717 + ABZR87_RS10785 0.70 -2.6 2,285,717 + ABZR87_RS10785 0.70 +0.2 2,285,717 + ABZR87_RS10785 0.70 -1.8 2,285,717 + ABZR87_RS10785 0.70 -0.4 2,285,718 - ABZR87_RS10785 0.70 -1.3 2,285,718 - ABZR87_RS10785 0.70 -1.0 2,285,718 - ABZR87_RS10785 0.70 -1.8 2,285,718 - ABZR87_RS10785 0.70 -2.0 2,285,718 - ABZR87_RS10785 0.70 -1.1 2,285,941 + ABZR87_RS10785 0.76 -1.4 2,286,067 + ABZR87_RS10785 0.80 -1.3 2,286,068 - ABZR87_RS10785 0.80 -0.8 2,286,068 - ABZR87_RS10785 0.80 -0.6 2,286,166 + ABZR87_RS10785 0.83 +1.6 2,286,167 - ABZR87_RS10785 0.83 -1.9 2,286,481 - -0.4 2,286,568 + -0.8 2,286,576 - -0.7 2,286,576 - -0.8 2,286,576 - +0.0 2,286,626 - -1.7 2,286,649 + -1.4 2,286,933 + -0.4 2,286,933 + +0.6 2,286,933 + +0.5 2,286,960 + -1.7 2,286,960 + +0.4 2,286,961 - -0.4 2,287,034 + +0.4 2,287,035 - +0.2 2,287,053 + +0.4 2,287,053 + -0.7
Or see this region's nucleotide sequence