Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS06215 and ABZR87_RS06220 are separated by 3 nucleotides ABZR87_RS06220 and ABZR87_RS06225 are separated by 77 nucleotides
ABZR87_RS06215: ABZR87_RS06215 - acyl-CoA dehydrogenase family protein, at 1,326,527 to 1,327,684
_RS06215
ABZR87_RS06220: ABZR87_RS06220 - biotin carboxylase N-terminal domain-containing protein, at 1,327,688 to 1,329,682
_RS06220
ABZR87_RS06225: ABZR87_RS06225 - AMP-binding protein, at 1,329,760 to 1,331,346
_RS06225
Position (kb)
1327
1328
1329
1330 Strain fitness (log2 ratio)
-1
0
1
2 at 1326.719 kb on + strand, within ABZR87_RS06215 at 1326.725 kb on + strand, within ABZR87_RS06215 at 1326.726 kb on - strand, within ABZR87_RS06215 at 1326.968 kb on + strand, within ABZR87_RS06215 at 1326.969 kb on - strand, within ABZR87_RS06215 at 1327.163 kb on + strand, within ABZR87_RS06215 at 1327.164 kb on - strand, within ABZR87_RS06215 at 1327.164 kb on - strand, within ABZR87_RS06215 at 1327.424 kb on + strand, within ABZR87_RS06215 at 1327.425 kb on - strand, within ABZR87_RS06215 at 1327.442 kb on + strand, within ABZR87_RS06215 at 1327.442 kb on + strand, within ABZR87_RS06215 at 1327.442 kb on + strand, within ABZR87_RS06215 at 1327.443 kb on - strand, within ABZR87_RS06215 at 1327.443 kb on - strand, within ABZR87_RS06215 at 1327.443 kb on - strand, within ABZR87_RS06215 at 1327.443 kb on - strand, within ABZR87_RS06215 at 1327.443 kb on - strand, within ABZR87_RS06215 at 1327.580 kb on + strand at 1327.652 kb on + strand at 1327.653 kb on - strand at 1327.653 kb on - strand at 1327.653 kb on - strand at 1327.883 kb on + strand at 1327.884 kb on - strand at 1327.884 kb on - strand at 1327.950 kb on - strand, within ABZR87_RS06220 at 1328.105 kb on + strand, within ABZR87_RS06220 at 1328.106 kb on - strand, within ABZR87_RS06220 at 1328.508 kb on - strand, within ABZR87_RS06220 at 1328.508 kb on - strand, within ABZR87_RS06220 at 1328.508 kb on - strand, within ABZR87_RS06220 at 1328.558 kb on + strand, within ABZR87_RS06220 at 1328.559 kb on - strand, within ABZR87_RS06220 at 1328.852 kb on + strand, within ABZR87_RS06220 at 1328.855 kb on + strand, within ABZR87_RS06220 at 1328.855 kb on + strand, within ABZR87_RS06220 at 1329.182 kb on + strand, within ABZR87_RS06220 at 1329.420 kb on + strand, within ABZR87_RS06220 at 1329.421 kb on + strand, within ABZR87_RS06220 at 1329.428 kb on + strand, within ABZR87_RS06220 at 1329.429 kb on - strand, within ABZR87_RS06220 at 1329.429 kb on - strand, within ABZR87_RS06220 at 1329.429 kb on - strand, within ABZR87_RS06220 at 1329.429 kb on - strand, within ABZR87_RS06220 at 1329.429 kb on - strand, within ABZR87_RS06220 at 1329.825 kb on + strand at 1329.826 kb on - strand at 1329.826 kb on - strand at 1329.926 kb on - strand, within ABZR87_RS06225 at 1330.016 kb on - strand, within ABZR87_RS06225 at 1330.084 kb on + strand, within ABZR87_RS06225 at 1330.085 kb on - strand, within ABZR87_RS06225 at 1330.085 kb on - strand, within ABZR87_RS06225 at 1330.085 kb on - strand, within ABZR87_RS06225 at 1330.136 kb on - strand, within ABZR87_RS06225 at 1330.251 kb on + strand, within ABZR87_RS06225 at 1330.301 kb on - strand, within ABZR87_RS06225 at 1330.301 kb on - strand, within ABZR87_RS06225 at 1330.301 kb on - strand, within ABZR87_RS06225 at 1330.301 kb on - strand, within ABZR87_RS06225 at 1330.301 kb on - strand, within ABZR87_RS06225 at 1330.577 kb on - strand, within ABZR87_RS06225 at 1330.577 kb on - strand, within ABZR87_RS06225
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 1,326,719 + ABZR87_RS06215 0.17 +0.0 1,326,725 + ABZR87_RS06215 0.17 +0.3 1,326,726 - ABZR87_RS06215 0.17 -0.5 1,326,968 + ABZR87_RS06215 0.38 +0.6 1,326,969 - ABZR87_RS06215 0.38 +0.4 1,327,163 + ABZR87_RS06215 0.55 +0.4 1,327,164 - ABZR87_RS06215 0.55 -0.0 1,327,164 - ABZR87_RS06215 0.55 +0.6 1,327,424 + ABZR87_RS06215 0.77 -0.2 1,327,425 - ABZR87_RS06215 0.78 -0.6 1,327,442 + ABZR87_RS06215 0.79 -0.7 1,327,442 + ABZR87_RS06215 0.79 +1.1 1,327,442 + ABZR87_RS06215 0.79 -0.3 1,327,443 - ABZR87_RS06215 0.79 +0.1 1,327,443 - ABZR87_RS06215 0.79 -0.2 1,327,443 - ABZR87_RS06215 0.79 +0.4 1,327,443 - ABZR87_RS06215 0.79 -0.0 1,327,443 - ABZR87_RS06215 0.79 +1.1 1,327,580 + -0.2 1,327,652 + +2.4 1,327,653 - +0.1 1,327,653 - -1.0 1,327,653 - -0.3 1,327,883 + -0.8 1,327,884 - +0.6 1,327,884 - +0.3 1,327,950 - ABZR87_RS06220 0.13 -1.0 1,328,105 + ABZR87_RS06220 0.21 -0.0 1,328,106 - ABZR87_RS06220 0.21 -0.3 1,328,508 - ABZR87_RS06220 0.41 -0.0 1,328,508 - ABZR87_RS06220 0.41 +0.2 1,328,508 - ABZR87_RS06220 0.41 -0.4 1,328,558 + ABZR87_RS06220 0.44 -0.3 1,328,559 - ABZR87_RS06220 0.44 -0.1 1,328,852 + ABZR87_RS06220 0.58 +0.1 1,328,855 + ABZR87_RS06220 0.58 -0.3 1,328,855 + ABZR87_RS06220 0.58 -0.2 1,329,182 + ABZR87_RS06220 0.75 +0.5 1,329,420 + ABZR87_RS06220 0.87 +0.4 1,329,421 + ABZR87_RS06220 0.87 +0.1 1,329,428 + ABZR87_RS06220 0.87 +0.2 1,329,429 - ABZR87_RS06220 0.87 +0.7 1,329,429 - ABZR87_RS06220 0.87 -0.2 1,329,429 - ABZR87_RS06220 0.87 +0.1 1,329,429 - ABZR87_RS06220 0.87 -0.5 1,329,429 - ABZR87_RS06220 0.87 +0.7 1,329,825 + -0.8 1,329,826 - -1.3 1,329,826 - -0.6 1,329,926 - ABZR87_RS06225 0.10 -0.1 1,330,016 - ABZR87_RS06225 0.16 +0.2 1,330,084 + ABZR87_RS06225 0.20 +0.8 1,330,085 - ABZR87_RS06225 0.20 +0.6 1,330,085 - ABZR87_RS06225 0.20 +0.6 1,330,085 - ABZR87_RS06225 0.20 -0.4 1,330,136 - ABZR87_RS06225 0.24 +0.6 1,330,251 + ABZR87_RS06225 0.31 +0.1 1,330,301 - ABZR87_RS06225 0.34 +0.9 1,330,301 - ABZR87_RS06225 0.34 +0.5 1,330,301 - ABZR87_RS06225 0.34 +0.5 1,330,301 - ABZR87_RS06225 0.34 -0.5 1,330,301 - ABZR87_RS06225 0.34 +0.1 1,330,577 - ABZR87_RS06225 0.51 +0.3 1,330,577 - ABZR87_RS06225 0.51 +0.5
Or see this region's nucleotide sequence