Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS03720

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS03710 and ABZR87_RS03715 are separated by 91 nucleotidesABZR87_RS03715 and ABZR87_RS03720 are separated by 46 nucleotidesABZR87_RS03720 and ABZR87_RS03725 are separated by 700 nucleotides ABZR87_RS03710: ABZR87_RS03710 - Hsp70 family protein, at 771,364 to 772,617 _RS03710 ABZR87_RS03715: ABZR87_RS03715 - NADPH-dependent FMN reductase, at 772,709 to 773,275 _RS03715 ABZR87_RS03720: ABZR87_RS03720 - hypothetical protein, at 773,322 to 773,690 _RS03720 ABZR87_RS03725: ABZR87_RS03725 - hypothetical protein, at 774,391 to 774,864 _RS03725 Position (kb) 773 774Strain fitness (log2 ratio) -2 -1 0 1at 772.468 kb on - strand, within ABZR87_RS03710at 772.695 kb on + strandat 772.764 kb on + strandat 772.765 kb on - strandat 772.765 kb on - strandat 772.793 kb on - strand, within ABZR87_RS03715at 772.806 kb on + strand, within ABZR87_RS03715at 772.807 kb on - strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.812 kb on + strand, within ABZR87_RS03715at 772.813 kb on - strand, within ABZR87_RS03715at 772.813 kb on - strand, within ABZR87_RS03715at 772.813 kb on - strand, within ABZR87_RS03715at 772.924 kb on + strand, within ABZR87_RS03715at 772.924 kb on + strand, within ABZR87_RS03715at 772.924 kb on + strand, within ABZR87_RS03715at 772.924 kb on + strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.925 kb on - strand, within ABZR87_RS03715at 772.941 kb on - strand, within ABZR87_RS03715at 772.941 kb on - strand, within ABZR87_RS03715at 773.323 kb on + strandat 773.323 kb on + strandat 773.324 kb on - strandat 773.324 kb on - strandat 773.324 kb on - strandat 773.324 kb on - strandat 773.333 kb on - strandat 773.333 kb on - strandat 773.346 kb on + strandat 773.347 kb on - strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.355 kb on + strandat 773.356 kb on - strandat 773.356 kb on - strandat 773.356 kb on - strandat 773.356 kb on - strandat 773.356 kb on - strandat 773.358 kb on + strandat 773.358 kb on + strandat 773.358 kb on + strandat 773.358 kb on + strandat 773.358 kb on + strandat 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.359 kb on - strand, within ABZR87_RS03720at 773.406 kb on + strand, within ABZR87_RS03720at 773.406 kb on + strand, within ABZR87_RS03720at 773.406 kb on + strand, within ABZR87_RS03720at 773.406 kb on + strand, within ABZR87_RS03720at 773.407 kb on - strand, within ABZR87_RS03720at 773.410 kb on + strand, within ABZR87_RS03720at 773.410 kb on + strand, within ABZR87_RS03720at 773.411 kb on - strand, within ABZR87_RS03720at 773.411 kb on - strand, within ABZR87_RS03720at 773.411 kb on - strand, within ABZR87_RS03720at 773.411 kb on - strand, within ABZR87_RS03720at 773.429 kb on + strand, within ABZR87_RS03720at 773.429 kb on + strand, within ABZR87_RS03720at 773.441 kb on + strand, within ABZR87_RS03720at 773.441 kb on + strand, within ABZR87_RS03720at 773.441 kb on + strand, within ABZR87_RS03720at 773.578 kb on + strand, within ABZR87_RS03720at 773.582 kb on + strand, within ABZR87_RS03720at 773.582 kb on + strand, within ABZR87_RS03720at 773.653 kb on + strand, within ABZR87_RS03720at 773.653 kb on + strand, within ABZR87_RS03720at 773.654 kb on - strandat 773.690 kb on + strandat 773.690 kb on + strandat 773.690 kb on + strandat 773.691 kb on - strandat 773.691 kb on - strandat 773.691 kb on - strandat 773.820 kb on + strandat 773.820 kb on + strandat 773.927 kb on + strandat 773.927 kb on + strandat 773.928 kb on - strandat 773.928 kb on - strandat 773.928 kb on - strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.929 kb on + strandat 773.930 kb on - strandat 773.930 kb on - strandat 773.930 kb on - strandat 773.930 kb on - strandat 773.930 kb on - strandat 773.930 kb on - strandat 773.985 kb on + strandat 773.985 kb on + strandat 773.986 kb on - strandat 773.986 kb on - strandat 773.986 kb on - strandat 773.986 kb on - strandat 773.986 kb on - strandat 774.188 kb on - strandat 774.188 kb on - strandat 774.302 kb on + strandat 774.302 kb on + strandat 774.302 kb on + strandat 774.303 kb on - strandat 774.303 kb on - strandat 774.303 kb on - strandat 774.315 kb on + strandat 774.370 kb on - strandat 774.378 kb on + strandat 774.378 kb on + strandat 774.378 kb on + strandat 774.378 kb on + strandat 774.378 kb on + strandat 774.379 kb on - strandat 774.379 kb on - strandat 774.379 kb on - strandat 774.379 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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772,468 - ABZR87_RS03710 0.88 +0.1
772,695 + -0.6
772,764 + +1.2
772,765 - +0.4
772,765 - +0.5
772,793 - ABZR87_RS03715 0.15 -0.0
772,806 + ABZR87_RS03715 0.17 +0.8
772,807 - ABZR87_RS03715 0.17 +0.3
772,812 + ABZR87_RS03715 0.18 -0.1
772,812 + ABZR87_RS03715 0.18 +0.1
772,812 + ABZR87_RS03715 0.18 -0.3
772,812 + ABZR87_RS03715 0.18 -0.5
772,812 + ABZR87_RS03715 0.18 +0.0
772,812 + ABZR87_RS03715 0.18 +0.3
772,812 + ABZR87_RS03715 0.18 +0.8
772,813 - ABZR87_RS03715 0.18 +0.4
772,813 - ABZR87_RS03715 0.18 +1.1
772,813 - ABZR87_RS03715 0.18 +0.5
772,924 + ABZR87_RS03715 0.38 -0.4
772,924 + ABZR87_RS03715 0.38 +1.2
772,924 + ABZR87_RS03715 0.38 -0.9
772,924 + ABZR87_RS03715 0.38 -0.8
772,925 - ABZR87_RS03715 0.38 +0.0
772,925 - ABZR87_RS03715 0.38 +1.2
772,925 - ABZR87_RS03715 0.38 -0.4
772,925 - ABZR87_RS03715 0.38 +0.1
772,925 - ABZR87_RS03715 0.38 +0.9
772,925 - ABZR87_RS03715 0.38 -0.5
772,941 - ABZR87_RS03715 0.41 -0.4
772,941 - ABZR87_RS03715 0.41 -0.7
773,323 + +0.2
773,323 + -0.2
773,324 - -0.2
773,324 - +0.3
773,324 - -0.9
773,324 - -0.4
773,333 - +0.1
773,333 - +0.7
773,346 + -0.3
773,347 - -0.3
773,355 + -0.1
773,355 + +0.3
773,355 + +0.3
773,355 + +0.0
773,355 + +1.4
773,355 + -0.3
773,355 + +0.1
773,356 - +0.5
773,356 - -0.0
773,356 - +0.1
773,356 - +0.5
773,356 - +0.1
773,358 + +0.2
773,358 + -0.7
773,358 + -0.2
773,358 + +0.1
773,358 + +1.3
773,359 - ABZR87_RS03720 0.10 -0.5
773,359 - ABZR87_RS03720 0.10 +0.8
773,359 - ABZR87_RS03720 0.10 -0.0
773,359 - ABZR87_RS03720 0.10 -0.0
773,359 - ABZR87_RS03720 0.10 -0.0
773,359 - ABZR87_RS03720 0.10 -0.4
773,359 - ABZR87_RS03720 0.10 +1.5
773,359 - ABZR87_RS03720 0.10 -0.3
773,359 - ABZR87_RS03720 0.10 -1.8
773,406 + ABZR87_RS03720 0.23 +0.0
773,406 + ABZR87_RS03720 0.23 -1.1
773,406 + ABZR87_RS03720 0.23 -0.1
773,406 + ABZR87_RS03720 0.23 -0.2
773,407 - ABZR87_RS03720 0.23 -0.6
773,410 + ABZR87_RS03720 0.24 +1.4
773,410 + ABZR87_RS03720 0.24 -0.6
773,411 - ABZR87_RS03720 0.24 -0.1
773,411 - ABZR87_RS03720 0.24 -0.4
773,411 - ABZR87_RS03720 0.24 +0.4
773,411 - ABZR87_RS03720 0.24 +0.1
773,429 + ABZR87_RS03720 0.29 +0.1
773,429 + ABZR87_RS03720 0.29 -0.5
773,441 + ABZR87_RS03720 0.32 -1.0
773,441 + ABZR87_RS03720 0.32 +0.1
773,441 + ABZR87_RS03720 0.32 +0.3
773,578 + ABZR87_RS03720 0.69 -0.0
773,582 + ABZR87_RS03720 0.70 +0.4
773,582 + ABZR87_RS03720 0.70 -1.2
773,653 + ABZR87_RS03720 0.90 +0.3
773,653 + ABZR87_RS03720 0.90 +0.5
773,654 - -0.5
773,690 + -0.2
773,690 + -1.0
773,690 + +0.4
773,691 - -1.0
773,691 - -2.0
773,691 - -0.2
773,820 + +0.3
773,820 + +0.8
773,927 + -0.1
773,927 + +1.0
773,928 - +1.2
773,928 - +0.4
773,928 - +0.2
773,929 + +0.8
773,929 + -0.5
773,929 + +1.0
773,929 + -0.1
773,929 + -0.4
773,929 + +0.6
773,929 + +0.4
773,929 + -0.1
773,929 + +0.2
773,929 + +0.4
773,930 - +0.7
773,930 - +0.6
773,930 - -0.1
773,930 - -0.2
773,930 - -0.8
773,930 - +0.4
773,985 + -0.0
773,985 + -0.3
773,986 - +0.1
773,986 - -0.1
773,986 - +0.4
773,986 - -0.9
773,986 - -0.2
774,188 - +0.3
774,188 - +0.2
774,302 + +0.9
774,302 + -1.0
774,302 + +0.2
774,303 - +0.9
774,303 - -0.2
774,303 - -0.0
774,315 + -0.6
774,370 - +0.1
774,378 + +1.5
774,378 + +0.4
774,378 + -0.1
774,378 + -0.6
774,378 + +0.1
774,379 - -0.9
774,379 - +0.4
774,379 - +0.3
774,379 - +0.7

Or see this region's nucleotide sequence