Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03025 and ABZR87_RS03030 overlap by 14 nucleotides ABZR87_RS03030 and ABZR87_RS03035 overlap by 4 nucleotides ABZR87_RS03035 and ABZR87_RS03040 overlap by 8 nucleotides
ABZR87_RS03025: ABZR87_RS03025 - ABC transporter ATP-binding protein, at 634,821 to 635,939
_RS03025
ABZR87_RS03030: ABZR87_RS03030 - ABC transporter ATP-binding protein, at 635,926 to 637,023
_RS03030
ABZR87_RS03035: ABZR87_RS03035 - sugar ABC transporter permease, at 637,020 to 637,910
_RS03035
ABZR87_RS03040: ABZR87_RS03040 - carbohydrate ABC transporter permease, at 637,903 to 638,736
_RS03040
Position (kb) 635
636
637
638 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 634.997 kb on - strand, within ABZR87_RS03025 at 634.997 kb on - strand, within ABZR87_RS03025 at 635.058 kb on + strand, within ABZR87_RS03025 at 635.058 kb on + strand, within ABZR87_RS03025 at 635.058 kb on + strand, within ABZR87_RS03025 at 635.058 kb on + strand, within ABZR87_RS03025 at 635.058 kb on + strand, within ABZR87_RS03025 at 635.059 kb on - strand, within ABZR87_RS03025 at 635.059 kb on - strand, within ABZR87_RS03025 at 635.059 kb on - strand, within ABZR87_RS03025 at 635.076 kb on + strand, within ABZR87_RS03025 at 635.077 kb on - strand, within ABZR87_RS03025 at 635.077 kb on - strand, within ABZR87_RS03025 at 635.077 kb on - strand, within ABZR87_RS03025 at 635.094 kb on + strand, within ABZR87_RS03025 at 635.094 kb on + strand, within ABZR87_RS03025 at 635.094 kb on + strand, within ABZR87_RS03025 at 635.095 kb on - strand, within ABZR87_RS03025 at 635.313 kb on + strand, within ABZR87_RS03025 at 635.314 kb on - strand, within ABZR87_RS03025 at 635.314 kb on - strand, within ABZR87_RS03025 at 635.314 kb on - strand, within ABZR87_RS03025 at 635.314 kb on - strand, within ABZR87_RS03025 at 635.382 kb on + strand, within ABZR87_RS03025 at 635.382 kb on + strand, within ABZR87_RS03025 at 635.383 kb on - strand, within ABZR87_RS03025 at 635.383 kb on - strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.481 kb on + strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.482 kb on - strand, within ABZR87_RS03025 at 635.593 kb on - strand, within ABZR87_RS03025 at 635.745 kb on + strand, within ABZR87_RS03025 at 635.745 kb on + strand, within ABZR87_RS03025 at 635.745 kb on + strand, within ABZR87_RS03025 at 635.745 kb on + strand, within ABZR87_RS03025 at 635.746 kb on - strand, within ABZR87_RS03025 at 635.755 kb on + strand, within ABZR87_RS03025 at 635.962 kb on + strand at 635.962 kb on + strand at 635.963 kb on - strand at 635.992 kb on + strand at 635.992 kb on + strand at 636.037 kb on + strand, within ABZR87_RS03030 at 636.037 kb on + strand, within ABZR87_RS03030 at 636.037 kb on + strand, within ABZR87_RS03030 at 636.038 kb on - strand, within ABZR87_RS03030 at 636.038 kb on - strand, within ABZR87_RS03030 at 636.038 kb on - strand, within ABZR87_RS03030 at 636.038 kb on - strand, within ABZR87_RS03030 at 636.202 kb on + strand, within ABZR87_RS03030 at 636.202 kb on + strand, within ABZR87_RS03030 at 636.203 kb on - strand, within ABZR87_RS03030 at 636.203 kb on - strand, within ABZR87_RS03030 at 636.203 kb on - strand, within ABZR87_RS03030 at 636.203 kb on - strand, within ABZR87_RS03030 at 636.511 kb on + strand, within ABZR87_RS03030 at 636.511 kb on + strand, within ABZR87_RS03030 at 636.511 kb on + strand, within ABZR87_RS03030 at 636.511 kb on + strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.512 kb on - strand, within ABZR87_RS03030 at 636.627 kb on + strand, within ABZR87_RS03030 at 636.627 kb on + strand, within ABZR87_RS03030 at 636.627 kb on + strand, within ABZR87_RS03030 at 636.627 kb on + strand, within ABZR87_RS03030 at 636.627 kb on + strand, within ABZR87_RS03030 at 636.628 kb on - strand, within ABZR87_RS03030 at 636.640 kb on + strand, within ABZR87_RS03030 at 636.991 kb on + strand at 636.991 kb on + strand at 636.991 kb on + strand at 636.991 kb on + strand at 636.991 kb on + strand at 636.992 kb on - strand at 636.992 kb on - strand at 636.992 kb on - strand at 636.994 kb on + strand at 636.994 kb on + strand at 636.994 kb on + strand at 636.995 kb on - strand at 636.995 kb on - strand at 636.995 kb on - strand at 636.995 kb on - strand at 637.119 kb on + strand, within ABZR87_RS03035 at 637.120 kb on - strand, within ABZR87_RS03035 at 637.120 kb on - strand, within ABZR87_RS03035 at 637.443 kb on + strand, within ABZR87_RS03035 at 637.443 kb on + strand, within ABZR87_RS03035 at 637.444 kb on - strand, within ABZR87_RS03035 at 637.444 kb on - strand, within ABZR87_RS03035 at 637.444 kb on - strand, within ABZR87_RS03035 at 637.449 kb on + strand, within ABZR87_RS03035 at 637.449 kb on + strand, within ABZR87_RS03035 at 637.449 kb on + strand, within ABZR87_RS03035 at 637.450 kb on - strand, within ABZR87_RS03035 at 637.450 kb on - strand, within ABZR87_RS03035 at 637.450 kb on - strand, within ABZR87_RS03035 at 637.450 kb on - strand, within ABZR87_RS03035 at 637.450 kb on - strand, within ABZR87_RS03035 at 637.533 kb on + strand, within ABZR87_RS03035 at 637.533 kb on + strand, within ABZR87_RS03035 at 637.534 kb on - strand, within ABZR87_RS03035 at 637.534 kb on - strand, within ABZR87_RS03035 at 637.566 kb on + strand, within ABZR87_RS03035 at 637.566 kb on + strand, within ABZR87_RS03035 at 637.567 kb on - strand, within ABZR87_RS03035 at 637.567 kb on - strand, within ABZR87_RS03035 at 637.614 kb on + strand, within ABZR87_RS03035 at 637.615 kb on - strand, within ABZR87_RS03035 at 637.615 kb on - strand, within ABZR87_RS03035 at 637.615 kb on - strand, within ABZR87_RS03035 at 637.615 kb on - strand, within ABZR87_RS03035 at 637.689 kb on + strand, within ABZR87_RS03035 at 637.689 kb on + strand, within ABZR87_RS03035 at 637.689 kb on + strand, within ABZR87_RS03035 at 637.690 kb on - strand, within ABZR87_RS03035 at 637.815 kb on + strand, within ABZR87_RS03035 at 637.815 kb on + strand, within ABZR87_RS03035 at 637.815 kb on + strand, within ABZR87_RS03035 at 637.815 kb on + strand, within ABZR87_RS03035 at 637.815 kb on + strand, within ABZR87_RS03035 at 637.816 kb on - strand, within ABZR87_RS03035 at 637.816 kb on - strand, within ABZR87_RS03035 at 637.851 kb on + strand at 637.851 kb on + strand at 637.852 kb on - strand at 637.908 kb on + strand at 637.908 kb on + strand at 637.909 kb on - strand at 637.969 kb on + strand at 637.969 kb on + strand at 637.969 kb on + strand at 637.969 kb on + strand at 637.970 kb on - strand at 637.970 kb on - strand at 637.970 kb on - strand at 637.970 kb on - strand at 637.970 kb on - strand at 637.970 kb on - strand at 637.996 kb on + strand, within ABZR87_RS03040 at 637.997 kb on - strand, within ABZR87_RS03040 at 637.997 kb on - strand, within ABZR87_RS03040
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 634,997 - ABZR87_RS03025 0.16 -3.3 634,997 - ABZR87_RS03025 0.16 -2.9 635,058 + ABZR87_RS03025 0.21 -1.3 635,058 + ABZR87_RS03025 0.21 -1.1 635,058 + ABZR87_RS03025 0.21 -3.9 635,058 + ABZR87_RS03025 0.21 -2.3 635,058 + ABZR87_RS03025 0.21 -2.4 635,059 - ABZR87_RS03025 0.21 -4.3 635,059 - ABZR87_RS03025 0.21 -3.3 635,059 - ABZR87_RS03025 0.21 -2.1 635,076 + ABZR87_RS03025 0.23 -0.9 635,077 - ABZR87_RS03025 0.23 -3.6 635,077 - ABZR87_RS03025 0.23 -4.0 635,077 - ABZR87_RS03025 0.23 -2.0 635,094 + ABZR87_RS03025 0.24 -2.3 635,094 + ABZR87_RS03025 0.24 -0.6 635,094 + ABZR87_RS03025 0.24 -0.8 635,095 - ABZR87_RS03025 0.24 -4.1 635,313 + ABZR87_RS03025 0.44 -2.2 635,314 - ABZR87_RS03025 0.44 -3.9 635,314 - ABZR87_RS03025 0.44 -2.6 635,314 - ABZR87_RS03025 0.44 -2.5 635,314 - ABZR87_RS03025 0.44 -2.8 635,382 + ABZR87_RS03025 0.50 -1.4 635,382 + ABZR87_RS03025 0.50 -0.9 635,383 - ABZR87_RS03025 0.50 -2.4 635,383 - ABZR87_RS03025 0.50 -1.4 635,481 + ABZR87_RS03025 0.59 -1.7 635,481 + ABZR87_RS03025 0.59 -1.0 635,481 + ABZR87_RS03025 0.59 -0.1 635,481 + ABZR87_RS03025 0.59 -1.3 635,481 + ABZR87_RS03025 0.59 -0.8 635,481 + ABZR87_RS03025 0.59 -0.5 635,481 + ABZR87_RS03025 0.59 -1.4 635,481 + ABZR87_RS03025 0.59 -0.7 635,481 + ABZR87_RS03025 0.59 -1.0 635,481 + ABZR87_RS03025 0.59 -0.3 635,482 - ABZR87_RS03025 0.59 -3.8 635,482 - ABZR87_RS03025 0.59 +0.1 635,482 - ABZR87_RS03025 0.59 -0.9 635,482 - ABZR87_RS03025 0.59 -3.8 635,482 - ABZR87_RS03025 0.59 -0.4 635,482 - ABZR87_RS03025 0.59 -3.6 635,482 - ABZR87_RS03025 0.59 -3.4 635,482 - ABZR87_RS03025 0.59 -3.6 635,482 - ABZR87_RS03025 0.59 -4.6 635,482 - ABZR87_RS03025 0.59 -2.4 635,482 - ABZR87_RS03025 0.59 -4.0 635,482 - ABZR87_RS03025 0.59 -0.7 635,593 - ABZR87_RS03025 0.69 -4.1 635,745 + ABZR87_RS03025 0.83 -1.7 635,745 + ABZR87_RS03025 0.83 -2.1 635,745 + ABZR87_RS03025 0.83 -2.7 635,745 + ABZR87_RS03025 0.83 -1.3 635,746 - ABZR87_RS03025 0.83 -3.2 635,755 + ABZR87_RS03025 0.83 -1.4 635,962 + -1.1 635,962 + -0.7 635,963 - -3.8 635,992 + -1.2 635,992 + -2.8 636,037 + ABZR87_RS03030 0.10 -0.7 636,037 + ABZR87_RS03030 0.10 -0.9 636,037 + ABZR87_RS03030 0.10 -2.0 636,038 - ABZR87_RS03030 0.10 -3.6 636,038 - ABZR87_RS03030 0.10 -2.6 636,038 - ABZR87_RS03030 0.10 -2.1 636,038 - ABZR87_RS03030 0.10 -3.3 636,202 + ABZR87_RS03030 0.25 -1.0 636,202 + ABZR87_RS03030 0.25 -0.2 636,203 - ABZR87_RS03030 0.25 -4.2 636,203 - ABZR87_RS03030 0.25 -3.4 636,203 - ABZR87_RS03030 0.25 -2.7 636,203 - ABZR87_RS03030 0.25 -0.1 636,511 + ABZR87_RS03030 0.53 -0.4 636,511 + ABZR87_RS03030 0.53 -0.3 636,511 + ABZR87_RS03030 0.53 -0.6 636,511 + ABZR87_RS03030 0.53 -0.1 636,512 - ABZR87_RS03030 0.53 -3.0 636,512 - ABZR87_RS03030 0.53 -2.7 636,512 - ABZR87_RS03030 0.53 -3.6 636,512 - ABZR87_RS03030 0.53 -5.6 636,512 - ABZR87_RS03030 0.53 -2.7 636,512 - ABZR87_RS03030 0.53 -2.4 636,512 - ABZR87_RS03030 0.53 -3.1 636,627 + ABZR87_RS03030 0.64 +0.1 636,627 + ABZR87_RS03030 0.64 +0.7 636,627 + ABZR87_RS03030 0.64 -1.2 636,627 + ABZR87_RS03030 0.64 +0.4 636,627 + ABZR87_RS03030 0.64 -0.1 636,628 - ABZR87_RS03030 0.64 -1.0 636,640 + ABZR87_RS03030 0.65 +0.3 636,991 + +0.4 636,991 + +0.8 636,991 + +0.7 636,991 + +0.5 636,991 + +0.4 636,992 - -3.4 636,992 - -1.4 636,992 - -2.9 636,994 + +0.1 636,994 + +0.6 636,994 + -1.4 636,995 - -3.4 636,995 - -2.8 636,995 - -2.3 636,995 - -3.1 637,119 + ABZR87_RS03035 0.11 -1.1 637,120 - ABZR87_RS03035 0.11 -4.2 637,120 - ABZR87_RS03035 0.11 -4.0 637,443 + ABZR87_RS03035 0.47 -1.6 637,443 + ABZR87_RS03035 0.47 -2.5 637,444 - ABZR87_RS03035 0.48 -4.0 637,444 - ABZR87_RS03035 0.48 -3.1 637,444 - ABZR87_RS03035 0.48 -3.7 637,449 + ABZR87_RS03035 0.48 -0.8 637,449 + ABZR87_RS03035 0.48 -0.6 637,449 + ABZR87_RS03035 0.48 -1.7 637,450 - ABZR87_RS03035 0.48 -4.5 637,450 - ABZR87_RS03035 0.48 -3.9 637,450 - ABZR87_RS03035 0.48 -3.2 637,450 - ABZR87_RS03035 0.48 -2.6 637,450 - ABZR87_RS03035 0.48 -3.7 637,533 + ABZR87_RS03035 0.58 -1.9 637,533 + ABZR87_RS03035 0.58 -0.5 637,534 - ABZR87_RS03035 0.58 -3.0 637,534 - ABZR87_RS03035 0.58 -3.8 637,566 + ABZR87_RS03035 0.61 -0.7 637,566 + ABZR87_RS03035 0.61 -0.9 637,567 - ABZR87_RS03035 0.61 -3.1 637,567 - ABZR87_RS03035 0.61 -2.5 637,614 + ABZR87_RS03035 0.67 -0.3 637,615 - ABZR87_RS03035 0.67 -1.3 637,615 - ABZR87_RS03035 0.67 -4.2 637,615 - ABZR87_RS03035 0.67 -2.2 637,615 - ABZR87_RS03035 0.67 -3.5 637,689 + ABZR87_RS03035 0.75 -0.4 637,689 + ABZR87_RS03035 0.75 -0.6 637,689 + ABZR87_RS03035 0.75 -1.0 637,690 - ABZR87_RS03035 0.75 -2.8 637,815 + ABZR87_RS03035 0.89 +0.2 637,815 + ABZR87_RS03035 0.89 +0.0 637,815 + ABZR87_RS03035 0.89 +0.0 637,815 + ABZR87_RS03035 0.89 -0.1 637,815 + ABZR87_RS03035 0.89 -0.6 637,816 - ABZR87_RS03035 0.89 -2.5 637,816 - ABZR87_RS03035 0.89 -2.5 637,851 + +1.0 637,851 + -0.1 637,852 - -2.7 637,908 + -2.9 637,908 + -1.7 637,909 - -0.4 637,969 + -2.0 637,969 + -1.0 637,969 + -1.0 637,969 + -0.7 637,970 - -3.6 637,970 - -5.1 637,970 - -3.7 637,970 - -2.9 637,970 - +1.1 637,970 - -3.8 637,996 + ABZR87_RS03040 0.11 -0.7 637,997 - ABZR87_RS03040 0.11 -3.6 637,997 - ABZR87_RS03040 0.11 -3.2
Or see this region's nucleotide sequence