Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS03025

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS03020 and ABZR87_RS03025 are separated by 67 nucleotidesABZR87_RS03025 and ABZR87_RS03030 overlap by 14 nucleotides ABZR87_RS03020: ABZR87_RS03020 - glycerol-3-phosphate dehydrogenase, at 633,176 to 634,753 _RS03020 ABZR87_RS03025: ABZR87_RS03025 - ABC transporter ATP-binding protein, at 634,821 to 635,939 _RS03025 ABZR87_RS03030: ABZR87_RS03030 - ABC transporter ATP-binding protein, at 635,926 to 637,023 _RS03030 Position (kb) 634 635 636Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.935 kb on + strand, within ABZR87_RS03020at 633.936 kb on - strand, within ABZR87_RS03020at 633.936 kb on - strand, within ABZR87_RS03020at 633.936 kb on - strand, within ABZR87_RS03020at 633.980 kb on + strand, within ABZR87_RS03020at 634.022 kb on + strand, within ABZR87_RS03020at 634.023 kb on - strand, within ABZR87_RS03020at 634.023 kb on - strand, within ABZR87_RS03020at 634.023 kb on - strand, within ABZR87_RS03020at 634.070 kb on + strand, within ABZR87_RS03020at 634.070 kb on + strand, within ABZR87_RS03020at 634.071 kb on - strand, within ABZR87_RS03020at 634.071 kb on - strand, within ABZR87_RS03020at 634.071 kb on - strand, within ABZR87_RS03020at 634.071 kb on - strand, within ABZR87_RS03020at 634.095 kb on - strand, within ABZR87_RS03020at 634.136 kb on + strand, within ABZR87_RS03020at 634.136 kb on + strand, within ABZR87_RS03020at 634.136 kb on + strand, within ABZR87_RS03020at 634.136 kb on + strand, within ABZR87_RS03020at 634.136 kb on + strand, within ABZR87_RS03020at 634.137 kb on - strand, within ABZR87_RS03020at 634.137 kb on - strand, within ABZR87_RS03020at 634.137 kb on - strand, within ABZR87_RS03020at 634.199 kb on + strand, within ABZR87_RS03020at 634.199 kb on + strand, within ABZR87_RS03020at 634.277 kb on + strand, within ABZR87_RS03020at 634.278 kb on - strand, within ABZR87_RS03020at 634.278 kb on - strand, within ABZR87_RS03020at 634.278 kb on - strand, within ABZR87_RS03020at 634.278 kb on - strand, within ABZR87_RS03020at 634.409 kb on + strand, within ABZR87_RS03020at 634.409 kb on + strand, within ABZR87_RS03020at 634.410 kb on - strand, within ABZR87_RS03020at 634.410 kb on - strand, within ABZR87_RS03020at 634.410 kb on - strand, within ABZR87_RS03020at 634.410 kb on - strand, within ABZR87_RS03020at 634.410 kb on - strand, within ABZR87_RS03020at 634.481 kb on + strand, within ABZR87_RS03020at 634.482 kb on - strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.571 kb on + strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.572 kb on - strand, within ABZR87_RS03020at 634.589 kb on + strand, within ABZR87_RS03020at 634.803 kb on + strandat 634.803 kb on + strandat 634.803 kb on + strandat 634.804 kb on - strandat 634.804 kb on - strandat 634.804 kb on - strandat 634.804 kb on - strandat 634.804 kb on - strandat 634.804 kb on - strandat 634.845 kb on - strandat 634.875 kb on + strandat 634.876 kb on - strandat 634.997 kb on - strand, within ABZR87_RS03025at 634.997 kb on - strand, within ABZR87_RS03025at 635.058 kb on + strand, within ABZR87_RS03025at 635.058 kb on + strand, within ABZR87_RS03025at 635.058 kb on + strand, within ABZR87_RS03025at 635.058 kb on + strand, within ABZR87_RS03025at 635.058 kb on + strand, within ABZR87_RS03025at 635.059 kb on - strand, within ABZR87_RS03025at 635.059 kb on - strand, within ABZR87_RS03025at 635.059 kb on - strand, within ABZR87_RS03025at 635.076 kb on + strand, within ABZR87_RS03025at 635.077 kb on - strand, within ABZR87_RS03025at 635.077 kb on - strand, within ABZR87_RS03025at 635.077 kb on - strand, within ABZR87_RS03025at 635.094 kb on + strand, within ABZR87_RS03025at 635.094 kb on + strand, within ABZR87_RS03025at 635.094 kb on + strand, within ABZR87_RS03025at 635.095 kb on - strand, within ABZR87_RS03025at 635.313 kb on + strand, within ABZR87_RS03025at 635.314 kb on - strand, within ABZR87_RS03025at 635.314 kb on - strand, within ABZR87_RS03025at 635.314 kb on - strand, within ABZR87_RS03025at 635.314 kb on - strand, within ABZR87_RS03025at 635.382 kb on + strand, within ABZR87_RS03025at 635.382 kb on + strand, within ABZR87_RS03025at 635.383 kb on - strand, within ABZR87_RS03025at 635.383 kb on - strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.481 kb on + strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.482 kb on - strand, within ABZR87_RS03025at 635.593 kb on - strand, within ABZR87_RS03025at 635.745 kb on + strand, within ABZR87_RS03025at 635.745 kb on + strand, within ABZR87_RS03025at 635.745 kb on + strand, within ABZR87_RS03025at 635.745 kb on + strand, within ABZR87_RS03025at 635.746 kb on - strand, within ABZR87_RS03025at 635.755 kb on + strand, within ABZR87_RS03025at 635.962 kb on + strandat 635.962 kb on + strandat 635.963 kb on - strandat 635.992 kb on + strandat 635.992 kb on + strandat 636.037 kb on + strand, within ABZR87_RS03030at 636.037 kb on + strand, within ABZR87_RS03030at 636.037 kb on + strand, within ABZR87_RS03030at 636.038 kb on - strand, within ABZR87_RS03030at 636.038 kb on - strand, within ABZR87_RS03030at 636.038 kb on - strand, within ABZR87_RS03030at 636.038 kb on - strand, within ABZR87_RS03030at 636.202 kb on + strand, within ABZR87_RS03030at 636.202 kb on + strand, within ABZR87_RS03030at 636.203 kb on - strand, within ABZR87_RS03030at 636.203 kb on - strand, within ABZR87_RS03030at 636.203 kb on - strand, within ABZR87_RS03030at 636.203 kb on - strand, within ABZR87_RS03030at 636.511 kb on + strand, within ABZR87_RS03030at 636.511 kb on + strand, within ABZR87_RS03030at 636.511 kb on + strand, within ABZR87_RS03030at 636.511 kb on + strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.512 kb on - strand, within ABZR87_RS03030at 636.627 kb on + strand, within ABZR87_RS03030at 636.627 kb on + strand, within ABZR87_RS03030at 636.627 kb on + strand, within ABZR87_RS03030at 636.627 kb on + strand, within ABZR87_RS03030at 636.627 kb on + strand, within ABZR87_RS03030at 636.628 kb on - strand, within ABZR87_RS03030at 636.640 kb on + strand, within ABZR87_RS03030

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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633,935 + ABZR87_RS03020 0.48 -2.7
633,935 + ABZR87_RS03020 0.48 -2.6
633,935 + ABZR87_RS03020 0.48 -2.3
633,935 + ABZR87_RS03020 0.48 -2.8
633,935 + ABZR87_RS03020 0.48 -3.8
633,935 + ABZR87_RS03020 0.48 -3.3
633,935 + ABZR87_RS03020 0.48 -2.9
633,936 - ABZR87_RS03020 0.48 -0.9
633,936 - ABZR87_RS03020 0.48 -2.5
633,936 - ABZR87_RS03020 0.48 -2.3
633,980 + ABZR87_RS03020 0.51 -2.1
634,022 + ABZR87_RS03020 0.54 -3.1
634,023 - ABZR87_RS03020 0.54 -3.0
634,023 - ABZR87_RS03020 0.54 -4.7
634,023 - ABZR87_RS03020 0.54 -3.4
634,070 + ABZR87_RS03020 0.57 -1.7
634,070 + ABZR87_RS03020 0.57 -3.3
634,071 - ABZR87_RS03020 0.57 -4.6
634,071 - ABZR87_RS03020 0.57 -0.9
634,071 - ABZR87_RS03020 0.57 -4.0
634,071 - ABZR87_RS03020 0.57 -3.3
634,095 - ABZR87_RS03020 0.58 -4.0
634,136 + ABZR87_RS03020 0.61 -2.7
634,136 + ABZR87_RS03020 0.61 -2.1
634,136 + ABZR87_RS03020 0.61 -3.2
634,136 + ABZR87_RS03020 0.61 -1.2
634,136 + ABZR87_RS03020 0.61 -3.4
634,137 - ABZR87_RS03020 0.61 -4.6
634,137 - ABZR87_RS03020 0.61 -2.0
634,137 - ABZR87_RS03020 0.61 -1.4
634,199 + ABZR87_RS03020 0.65 -3.0
634,199 + ABZR87_RS03020 0.65 -1.4
634,277 + ABZR87_RS03020 0.70 -3.0
634,278 - ABZR87_RS03020 0.70 -3.9
634,278 - ABZR87_RS03020 0.70 -4.0
634,278 - ABZR87_RS03020 0.70 +0.1
634,278 - ABZR87_RS03020 0.70 -1.4
634,409 + ABZR87_RS03020 0.78 -0.3
634,409 + ABZR87_RS03020 0.78 -4.2
634,410 - ABZR87_RS03020 0.78 -3.3
634,410 - ABZR87_RS03020 0.78 -1.6
634,410 - ABZR87_RS03020 0.78 -4.0
634,410 - ABZR87_RS03020 0.78 -4.0
634,410 - ABZR87_RS03020 0.78 -3.8
634,481 + ABZR87_RS03020 0.83 -1.3
634,482 - ABZR87_RS03020 0.83 -1.1
634,571 + ABZR87_RS03020 0.88 -2.4
634,571 + ABZR87_RS03020 0.88 -3.6
634,571 + ABZR87_RS03020 0.88 -1.0
634,571 + ABZR87_RS03020 0.88 -2.0
634,571 + ABZR87_RS03020 0.88 -1.5
634,571 + ABZR87_RS03020 0.88 -0.9
634,572 - ABZR87_RS03020 0.88 -3.2
634,572 - ABZR87_RS03020 0.88 -3.3
634,572 - ABZR87_RS03020 0.88 -4.0
634,572 - ABZR87_RS03020 0.88 -4.0
634,572 - ABZR87_RS03020 0.88 -1.5
634,572 - ABZR87_RS03020 0.88 -2.5
634,572 - ABZR87_RS03020 0.88 -2.8
634,572 - ABZR87_RS03020 0.88 -3.8
634,572 - ABZR87_RS03020 0.88 -3.8
634,572 - ABZR87_RS03020 0.88 -5.1
634,589 + ABZR87_RS03020 0.90 -2.4
634,803 + +0.3
634,803 + -0.3
634,803 + +1.0
634,804 - -4.1
634,804 - -1.0
634,804 - -2.0
634,804 - -2.5
634,804 - -1.6
634,804 - -4.2
634,845 - -3.3
634,875 + -1.0
634,876 - -1.1
634,997 - ABZR87_RS03025 0.16 -3.3
634,997 - ABZR87_RS03025 0.16 -2.9
635,058 + ABZR87_RS03025 0.21 -1.3
635,058 + ABZR87_RS03025 0.21 -1.1
635,058 + ABZR87_RS03025 0.21 -3.9
635,058 + ABZR87_RS03025 0.21 -2.3
635,058 + ABZR87_RS03025 0.21 -2.4
635,059 - ABZR87_RS03025 0.21 -4.3
635,059 - ABZR87_RS03025 0.21 -3.3
635,059 - ABZR87_RS03025 0.21 -2.1
635,076 + ABZR87_RS03025 0.23 -0.9
635,077 - ABZR87_RS03025 0.23 -3.6
635,077 - ABZR87_RS03025 0.23 -4.0
635,077 - ABZR87_RS03025 0.23 -2.0
635,094 + ABZR87_RS03025 0.24 -2.3
635,094 + ABZR87_RS03025 0.24 -0.6
635,094 + ABZR87_RS03025 0.24 -0.8
635,095 - ABZR87_RS03025 0.24 -4.1
635,313 + ABZR87_RS03025 0.44 -2.2
635,314 - ABZR87_RS03025 0.44 -3.9
635,314 - ABZR87_RS03025 0.44 -2.6
635,314 - ABZR87_RS03025 0.44 -2.5
635,314 - ABZR87_RS03025 0.44 -2.8
635,382 + ABZR87_RS03025 0.50 -1.4
635,382 + ABZR87_RS03025 0.50 -0.9
635,383 - ABZR87_RS03025 0.50 -2.4
635,383 - ABZR87_RS03025 0.50 -1.4
635,481 + ABZR87_RS03025 0.59 -1.7
635,481 + ABZR87_RS03025 0.59 -1.0
635,481 + ABZR87_RS03025 0.59 -0.1
635,481 + ABZR87_RS03025 0.59 -1.3
635,481 + ABZR87_RS03025 0.59 -0.8
635,481 + ABZR87_RS03025 0.59 -0.5
635,481 + ABZR87_RS03025 0.59 -1.4
635,481 + ABZR87_RS03025 0.59 -0.7
635,481 + ABZR87_RS03025 0.59 -1.0
635,481 + ABZR87_RS03025 0.59 -0.3
635,482 - ABZR87_RS03025 0.59 -3.8
635,482 - ABZR87_RS03025 0.59 +0.1
635,482 - ABZR87_RS03025 0.59 -0.9
635,482 - ABZR87_RS03025 0.59 -3.8
635,482 - ABZR87_RS03025 0.59 -0.4
635,482 - ABZR87_RS03025 0.59 -3.6
635,482 - ABZR87_RS03025 0.59 -3.4
635,482 - ABZR87_RS03025 0.59 -3.6
635,482 - ABZR87_RS03025 0.59 -4.6
635,482 - ABZR87_RS03025 0.59 -2.4
635,482 - ABZR87_RS03025 0.59 -4.0
635,482 - ABZR87_RS03025 0.59 -0.7
635,593 - ABZR87_RS03025 0.69 -4.1
635,745 + ABZR87_RS03025 0.83 -1.7
635,745 + ABZR87_RS03025 0.83 -2.1
635,745 + ABZR87_RS03025 0.83 -2.7
635,745 + ABZR87_RS03025 0.83 -1.3
635,746 - ABZR87_RS03025 0.83 -3.2
635,755 + ABZR87_RS03025 0.83 -1.4
635,962 + -1.1
635,962 + -0.7
635,963 - -3.8
635,992 + -1.2
635,992 + -2.8
636,037 + ABZR87_RS03030 0.10 -0.7
636,037 + ABZR87_RS03030 0.10 -0.9
636,037 + ABZR87_RS03030 0.10 -2.0
636,038 - ABZR87_RS03030 0.10 -3.6
636,038 - ABZR87_RS03030 0.10 -2.6
636,038 - ABZR87_RS03030 0.10 -2.1
636,038 - ABZR87_RS03030 0.10 -3.3
636,202 + ABZR87_RS03030 0.25 -1.0
636,202 + ABZR87_RS03030 0.25 -0.2
636,203 - ABZR87_RS03030 0.25 -4.2
636,203 - ABZR87_RS03030 0.25 -3.4
636,203 - ABZR87_RS03030 0.25 -2.7
636,203 - ABZR87_RS03030 0.25 -0.1
636,511 + ABZR87_RS03030 0.53 -0.4
636,511 + ABZR87_RS03030 0.53 -0.3
636,511 + ABZR87_RS03030 0.53 -0.6
636,511 + ABZR87_RS03030 0.53 -0.1
636,512 - ABZR87_RS03030 0.53 -3.0
636,512 - ABZR87_RS03030 0.53 -2.7
636,512 - ABZR87_RS03030 0.53 -3.6
636,512 - ABZR87_RS03030 0.53 -5.6
636,512 - ABZR87_RS03030 0.53 -2.7
636,512 - ABZR87_RS03030 0.53 -2.4
636,512 - ABZR87_RS03030 0.53 -3.1
636,627 + ABZR87_RS03030 0.64 +0.1
636,627 + ABZR87_RS03030 0.64 +0.7
636,627 + ABZR87_RS03030 0.64 -1.2
636,627 + ABZR87_RS03030 0.64 +0.4
636,627 + ABZR87_RS03030 0.64 -0.1
636,628 - ABZR87_RS03030 0.64 -1.0
636,640 + ABZR87_RS03030 0.65 +0.3

Or see this region's nucleotide sequence