Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS01825

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS01815 and ABZR87_RS01820 are separated by 196 nucleotidesABZR87_RS01820 and ABZR87_RS01825 are separated by 37 nucleotidesABZR87_RS01825 and ABZR87_RS01830 are separated by 332 nucleotides ABZR87_RS01815: ABZR87_RS01815 - GTPase ObgE, at 386,101 to 387,195 _RS01815 ABZR87_RS01820: ABZR87_RS01820 - 50S ribosomal protein L27, at 387,392 to 387,652 _RS01820 ABZR87_RS01825: ABZR87_RS01825 - 50S ribosomal protein L21, at 387,690 to 388,001 _RS01825 ABZR87_RS01830: ABZR87_RS01830 - octaprenyl diphosphate synthase, at 388,334 to 389,263 _RS01830 Position (kb) 387 388 389Strain fitness (log2 ratio) -1 0 1at 387.232 kb on - strandat 387.265 kb on - strandat 387.304 kb on - strandat 387.333 kb on - strandat 387.377 kb on + strandat 387.378 kb on - strandat 387.380 kb on + strandat 387.380 kb on + strandat 387.380 kb on + strandat 387.381 kb on - strandat 387.381 kb on - strandat 387.381 kb on - strandat 387.381 kb on - strandat 387.381 kb on - strandat 387.381 kb on - strandat 387.394 kb on - strandat 388.093 kb on - strandat 388.208 kb on + strandat 388.208 kb on + strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.209 kb on - strandat 388.210 kb on + strandat 388.210 kb on + strandat 388.210 kb on + strandat 388.211 kb on - strandat 388.211 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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387,232 - -0.1
387,265 - +0.6
387,304 - +0.6
387,333 - -0.3
387,377 + -0.6
387,378 - +1.6
387,380 + -0.4
387,380 + -0.2
387,380 + +0.6
387,381 - +0.3
387,381 - +0.3
387,381 - +0.3
387,381 - -0.7
387,381 - +0.8
387,381 - +1.2
387,394 - +0.2
388,093 - +0.1
388,208 + +0.2
388,208 + +0.2
388,209 - +0.7
388,209 - +0.6
388,209 - -0.0
388,209 - -1.1
388,209 - +0.0
388,209 - -0.1
388,209 - +0.2
388,209 - -0.1
388,210 + +0.2
388,210 + +0.2
388,210 + +0.5
388,211 - +0.4
388,211 - +0.7

Or see this region's nucleotide sequence