Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01130 and ABZR87_RS01135 are separated by 498 nucleotides ABZR87_RS01135 and ABZR87_RS01140 are separated by 17 nucleotides ABZR87_RS01140 and ABZR87_RS01145 are separated by 22 nucleotides
ABZR87_RS01130: ABZR87_RS01130 - LysR substrate-binding domain-containing protein, at 234,509 to 235,399
_RS01130
ABZR87_RS01135: ABZR87_RS01135 - FAD-linked oxidase C-terminal domain-containing protein, at 235,898 to 237,397
_RS01135
ABZR87_RS01140: ABZR87_RS01140 - ion transporter, at 237,415 to 238,359
_RS01140
ABZR87_RS01145: ABZR87_RS01145 - glycolate oxidase subunit GlcE, at 238,382 to 239,515
_RS01145
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 234.969 kb on - strand, within ABZR87_RS01130 at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.316 kb on + strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.317 kb on - strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.319 kb on + strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.320 kb on - strand at 235.397 kb on + strand at 235.398 kb on - strand at 235.398 kb on - strand at 235.398 kb on - strand at 235.473 kb on - strand at 235.473 kb on - strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.540 kb on + strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.541 kb on - strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.614 kb on + strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.615 kb on - strand at 235.634 kb on + strand at 235.697 kb on - strand at 235.697 kb on - strand at 235.815 kb on - strand at 235.843 kb on + strand at 235.843 kb on + strand at 235.843 kb on + strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.844 kb on - strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.845 kb on + strand at 235.846 kb on - strand at 236.027 kb on + strand at 236.028 kb on - strand at 236.028 kb on - strand at 236.249 kb on + strand, within ABZR87_RS01135 at 236.249 kb on + strand, within ABZR87_RS01135 at 236.250 kb on - strand, within ABZR87_RS01135 at 236.324 kb on + strand, within ABZR87_RS01135 at 236.324 kb on + strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.325 kb on - strand, within ABZR87_RS01135 at 236.327 kb on + strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.328 kb on - strand, within ABZR87_RS01135 at 236.411 kb on + strand, within ABZR87_RS01135 at 236.412 kb on - strand, within ABZR87_RS01135 at 236.745 kb on - strand, within ABZR87_RS01135 at 236.948 kb on + strand, within ABZR87_RS01135 at 236.948 kb on + strand, within ABZR87_RS01135 at 236.948 kb on + strand, within ABZR87_RS01135 at 236.948 kb on + strand, within ABZR87_RS01135 at 236.949 kb on - strand, within ABZR87_RS01135 at 236.949 kb on - strand, within ABZR87_RS01135 at 236.949 kb on - strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.951 kb on + strand, within ABZR87_RS01135 at 236.952 kb on - strand, within ABZR87_RS01135 at 236.952 kb on - strand, within ABZR87_RS01135 at 236.952 kb on - strand, within ABZR87_RS01135 at 237.026 kb on + strand, within ABZR87_RS01135 at 237.026 kb on + strand, within ABZR87_RS01135 at 237.026 kb on + strand, within ABZR87_RS01135 at 237.026 kb on + strand, within ABZR87_RS01135 at 237.027 kb on - strand, within ABZR87_RS01135 at 237.395 kb on + strand at 237.436 kb on - strand at 237.456 kb on + strand at 237.456 kb on + strand at 237.456 kb on + strand at 237.456 kb on + strand at 237.457 kb on - strand at 237.457 kb on - strand at 237.476 kb on - strand at 237.476 kb on - strand at 237.517 kb on + strand, within ABZR87_RS01140 at 237.517 kb on + strand, within ABZR87_RS01140 at 237.517 kb on + strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.518 kb on - strand, within ABZR87_RS01140 at 237.629 kb on + strand, within ABZR87_RS01140 at 237.629 kb on + strand, within ABZR87_RS01140 at 237.629 kb on + strand, within ABZR87_RS01140 at 237.629 kb on + strand, within ABZR87_RS01140 at 237.697 kb on + strand, within ABZR87_RS01140 at 237.697 kb on + strand, within ABZR87_RS01140 at 237.697 kb on + strand, within ABZR87_RS01140 at 237.697 kb on + strand, within ABZR87_RS01140 at 237.698 kb on - strand, within ABZR87_RS01140 at 237.698 kb on - strand, within ABZR87_RS01140 at 237.698 kb on - strand, within ABZR87_RS01140 at 237.736 kb on + strand, within ABZR87_RS01140 at 237.737 kb on - strand, within ABZR87_RS01140 at 237.817 kb on + strand, within ABZR87_RS01140 at 237.817 kb on + strand, within ABZR87_RS01140 at 237.817 kb on + strand, within ABZR87_RS01140 at 237.818 kb on - strand, within ABZR87_RS01140 at 237.818 kb on - strand, within ABZR87_RS01140 at 237.880 kb on + strand, within ABZR87_RS01140 at 237.881 kb on - strand, within ABZR87_RS01140 at 237.991 kb on + strand, within ABZR87_RS01140 at 237.991 kb on + strand, within ABZR87_RS01140 at 237.991 kb on + strand, within ABZR87_RS01140 at 237.991 kb on + strand, within ABZR87_RS01140 at 237.991 kb on + strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 237.992 kb on - strand, within ABZR87_RS01140 at 238.042 kb on + strand, within ABZR87_RS01140 at 238.042 kb on + strand, within ABZR87_RS01140 at 238.042 kb on + strand, within ABZR87_RS01140 at 238.042 kb on + strand, within ABZR87_RS01140 at 238.043 kb on - strand, within ABZR87_RS01140 at 238.043 kb on - strand, within ABZR87_RS01140 at 238.043 kb on - strand, within ABZR87_RS01140 at 238.043 kb on - strand, within ABZR87_RS01140
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 234,969 - ABZR87_RS01130 0.52 +1.6 235,316 + -0.4 235,316 + -0.4 235,316 + +1.5 235,316 + +0.1 235,316 + -0.0 235,316 + -0.2 235,316 + +0.9 235,316 + +0.6 235,317 - -1.2 235,317 - -0.1 235,317 - +0.1 235,317 - -0.0 235,317 - +0.4 235,319 + +0.8 235,319 + -0.6 235,319 + +0.6 235,319 + +0.5 235,319 + +0.1 235,320 - -0.7 235,320 - -0.6 235,320 - -1.1 235,320 - +0.1 235,320 - -0.7 235,320 - -1.6 235,397 + -0.6 235,398 - -0.4 235,398 - -0.0 235,398 - +0.3 235,473 - +0.3 235,473 - +0.0 235,540 + +0.1 235,540 + +0.1 235,540 + +0.1 235,540 + +0.1 235,540 + +0.6 235,541 - +0.2 235,541 - +0.7 235,541 - +0.1 235,541 - -0.1 235,541 - +1.6 235,541 - +1.1 235,541 - +0.9 235,541 - +0.1 235,541 - -0.2 235,614 + -0.9 235,614 + +0.2 235,614 + +0.1 235,614 + -0.5 235,614 + +1.1 235,614 + +0.4 235,614 + +0.1 235,614 + +0.4 235,615 - +0.6 235,615 - +0.2 235,615 - -0.3 235,615 - +0.3 235,615 - +0.4 235,615 - -0.6 235,615 - +0.2 235,615 - +0.5 235,615 - +0.0 235,615 - +0.4 235,634 + +0.4 235,697 - +0.6 235,697 - +0.1 235,815 - -0.8 235,843 + +0.7 235,843 + +0.6 235,843 + +0.2 235,844 - +0.9 235,844 - -0.0 235,844 - +0.3 235,844 - -0.6 235,844 - +0.0 235,844 - +0.3 235,845 + -0.4 235,845 + -0.2 235,845 + +0.5 235,845 + -1.2 235,845 + +0.1 235,845 + -0.9 235,845 + +0.9 235,845 + -0.1 235,846 - -1.3 236,027 + -3.2 236,028 - -3.1 236,028 - -0.4 236,249 + ABZR87_RS01135 0.23 -1.2 236,249 + ABZR87_RS01135 0.23 -2.0 236,250 - ABZR87_RS01135 0.23 -1.2 236,324 + ABZR87_RS01135 0.28 -1.3 236,324 + ABZR87_RS01135 0.28 +0.1 236,325 - ABZR87_RS01135 0.28 -3.7 236,325 - ABZR87_RS01135 0.28 -1.5 236,325 - ABZR87_RS01135 0.28 -2.3 236,325 - ABZR87_RS01135 0.28 -2.0 236,327 + ABZR87_RS01135 0.29 +0.0 236,328 - ABZR87_RS01135 0.29 -0.7 236,328 - ABZR87_RS01135 0.29 +0.7 236,328 - ABZR87_RS01135 0.29 -2.1 236,328 - ABZR87_RS01135 0.29 -3.9 236,328 - ABZR87_RS01135 0.29 -2.4 236,411 + ABZR87_RS01135 0.34 -0.4 236,412 - ABZR87_RS01135 0.34 -1.4 236,745 - ABZR87_RS01135 0.56 -0.6 236,948 + ABZR87_RS01135 0.70 -3.0 236,948 + ABZR87_RS01135 0.70 -1.1 236,948 + ABZR87_RS01135 0.70 -0.8 236,948 + ABZR87_RS01135 0.70 -0.7 236,949 - ABZR87_RS01135 0.70 -2.4 236,949 - ABZR87_RS01135 0.70 -1.4 236,949 - ABZR87_RS01135 0.70 -1.2 236,951 + ABZR87_RS01135 0.70 -2.2 236,951 + ABZR87_RS01135 0.70 -1.7 236,951 + ABZR87_RS01135 0.70 -2.0 236,951 + ABZR87_RS01135 0.70 -2.1 236,951 + ABZR87_RS01135 0.70 -3.2 236,951 + ABZR87_RS01135 0.70 -1.6 236,952 - ABZR87_RS01135 0.70 -0.5 236,952 - ABZR87_RS01135 0.70 -2.2 236,952 - ABZR87_RS01135 0.70 -2.9 237,026 + ABZR87_RS01135 0.75 -1.5 237,026 + ABZR87_RS01135 0.75 -1.8 237,026 + ABZR87_RS01135 0.75 -1.3 237,026 + ABZR87_RS01135 0.75 -2.7 237,027 - ABZR87_RS01135 0.75 -1.0 237,395 + +0.0 237,436 - -0.3 237,456 + +0.4 237,456 + -0.7 237,456 + +0.3 237,456 + -0.3 237,457 - -1.4 237,457 - -1.7 237,476 - -2.6 237,476 - -0.2 237,517 + ABZR87_RS01140 0.11 -1.2 237,517 + ABZR87_RS01140 0.11 +0.2 237,517 + ABZR87_RS01140 0.11 -0.1 237,518 - ABZR87_RS01140 0.11 -1.1 237,518 - ABZR87_RS01140 0.11 -2.0 237,518 - ABZR87_RS01140 0.11 -1.9 237,518 - ABZR87_RS01140 0.11 -1.5 237,518 - ABZR87_RS01140 0.11 -0.8 237,518 - ABZR87_RS01140 0.11 -2.1 237,518 - ABZR87_RS01140 0.11 -1.0 237,518 - ABZR87_RS01140 0.11 -1.9 237,518 - ABZR87_RS01140 0.11 -0.5 237,629 + ABZR87_RS01140 0.23 -0.1 237,629 + ABZR87_RS01140 0.23 +0.6 237,629 + ABZR87_RS01140 0.23 +0.4 237,629 + ABZR87_RS01140 0.23 +0.8 237,697 + ABZR87_RS01140 0.30 +0.2 237,697 + ABZR87_RS01140 0.30 +0.0 237,697 + ABZR87_RS01140 0.30 -0.6 237,697 + ABZR87_RS01140 0.30 +0.5 237,698 - ABZR87_RS01140 0.30 -0.5 237,698 - ABZR87_RS01140 0.30 -1.1 237,698 - ABZR87_RS01140 0.30 -1.2 237,736 + ABZR87_RS01140 0.34 +0.4 237,737 - ABZR87_RS01140 0.34 -0.9 237,817 + ABZR87_RS01140 0.43 -0.1 237,817 + ABZR87_RS01140 0.43 +0.4 237,817 + ABZR87_RS01140 0.43 -0.4 237,818 - ABZR87_RS01140 0.43 -1.5 237,818 - ABZR87_RS01140 0.43 -1.5 237,880 + ABZR87_RS01140 0.49 +0.5 237,881 - ABZR87_RS01140 0.49 -2.1 237,991 + ABZR87_RS01140 0.61 -0.0 237,991 + ABZR87_RS01140 0.61 -0.9 237,991 + ABZR87_RS01140 0.61 -0.7 237,991 + ABZR87_RS01140 0.61 -1.0 237,991 + ABZR87_RS01140 0.61 +0.4 237,992 - ABZR87_RS01140 0.61 -1.7 237,992 - ABZR87_RS01140 0.61 -0.6 237,992 - ABZR87_RS01140 0.61 +0.4 237,992 - ABZR87_RS01140 0.61 -1.2 237,992 - ABZR87_RS01140 0.61 +0.2 237,992 - ABZR87_RS01140 0.61 -1.6 238,042 + ABZR87_RS01140 0.66 +0.2 238,042 + ABZR87_RS01140 0.66 +0.3 238,042 + ABZR87_RS01140 0.66 +0.3 238,042 + ABZR87_RS01140 0.66 +0.4 238,043 - ABZR87_RS01140 0.66 -0.5 238,043 - ABZR87_RS01140 0.66 -0.1 238,043 - ABZR87_RS01140 0.66 -0.9 238,043 - ABZR87_RS01140 0.66 -0.6
Or see this region's nucleotide sequence