Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_004828

Experiment: Uridine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (C)
1,043,823	+		ABIE53_004827	0.73	-0.2
1,043,823	+		ABIE53_004827	0.73	-1.4
1,043,823	+		ABIE53_004827	0.73	-2.3
1,043,823	+		ABIE53_004827	0.73	-0.2
1,043,823	+		ABIE53_004827	0.73	-0.8
1,043,823	+		ABIE53_004827	0.73	+0.7
1,043,824	-		ABIE53_004827	0.73	-0.3
1,043,824	-		ABIE53_004827	0.73	-1.9
1,043,824	-		ABIE53_004827	0.73	-0.5
1,043,940	+		ABIE53_004827	0.76	-1.6
1,043,941	-		ABIE53_004827	0.76	-1.2
1,044,068	-		ABIE53_004827	0.80	+0.3
1,044,148	-		ABIE53_004827	0.82	+0.2
1,044,162	+		ABIE53_004827	0.83	-0.3
1,044,163	-		ABIE53_004827	0.83	+1.3
1,044,163	-		ABIE53_004827	0.83	-1.4
1,044,163	-		ABIE53_004827	0.83	-0.8
1,044,163	-		ABIE53_004827	0.83	+0.0
1,044,163	-		ABIE53_004827	0.83	-1.9
1,044,165	+		ABIE53_004827	0.83	-2.4
1,044,165	+		ABIE53_004827	0.83	-0.8
1,044,220	+		ABIE53_004827	0.85	-1.3
1,044,220	+		ABIE53_004827	0.85	-0.2
1,044,220	+		ABIE53_004827	0.85	+1.0
1,044,221	-		ABIE53_004827	0.85	+0.2
1,044,221	-		ABIE53_004827	0.85	+0.4
1,044,221	-		ABIE53_004827	0.85	-1.4
1,044,221	-		ABIE53_004827	0.85	+1.1
1,044,237	+		ABIE53_004827	0.85	-0.7
1,044,238	-		ABIE53_004827	0.85	-1.0
1,044,250	+		ABIE53_004827	0.85	+0.6
1,044,264	+		ABIE53_004827	0.86	+0.9
1,044,264	+		ABIE53_004827	0.86	-0.3
1,044,264	+		ABIE53_004827	0.86	+0.0
1,044,264	+		ABIE53_004827	0.86	+0.7
1,044,264	+		ABIE53_004827	0.86	+0.0
1,044,264	+		ABIE53_004827	0.86	-2.0
1,044,264	+		ABIE53_004827	0.86	-0.2
1,044,264	+		ABIE53_004827	0.86	+1.4
1,044,264	+		ABIE53_004827	0.86	+2.4
1,044,265	-		ABIE53_004827	0.86	-1.4
1,044,265	-		ABIE53_004827	0.86	-0.6
1,044,265	-		ABIE53_004827	0.86	-1.2
1,044,265	-		ABIE53_004827	0.86	-0.8
1,044,265	-		ABIE53_004827	0.86	-1.0
1,044,340	+		ABIE53_004827	0.88	-1.9
1,044,341	-		ABIE53_004827	0.88	+0.7
1,044,344	+		ABIE53_004827	0.88	-0.5
1,044,344	+		ABIE53_004827	0.88	-1.1
1,044,344	+		ABIE53_004827	0.88	-0.4
1,044,345	-		ABIE53_004827	0.88	-1.2
1,044,345	-		ABIE53_004827	0.88	-0.2
1,044,345	-		ABIE53_004827	0.88	+0.1
1,044,345	-		ABIE53_004827	0.88	-1.1
1,044,528	+				-2.4
1,044,528	+				+1.5
1,044,528	+				-0.4
1,044,528	+				-1.2
1,044,529	-				+0.5
1,044,529	-				+0.2
1,044,609	+				-0.6
1,044,609	+				-0.3
1,044,609	+				-0.5
1,044,609	+				+0.0
1,044,610	-				-0.6
1,044,610	-				-1.2
1,044,754	+				-1.1
1,044,754	+				+1.4
1,044,755	-				+0.1
1,044,774	+				-0.2
1,045,083	+				-2.1
1,045,256	+		ABIE53_004828	0.15	-0.2
1,045,257	-		ABIE53_004828	0.15	+1.0
1,045,257	-		ABIE53_004828	0.15	-0.6
1,045,257	-		ABIE53_004828	0.15	+0.2
1,045,274	+		ABIE53_004828	0.15	+0.4
1,045,274	+		ABIE53_004828	0.15	-1.2
1,045,275	-		ABIE53_004828	0.15	-1.3
1,045,275	-		ABIE53_004828	0.15	-2.8
1,045,309	+		ABIE53_004828	0.16	-1.1
1,045,309	+		ABIE53_004828	0.16	-1.5
1,045,309	+		ABIE53_004828	0.16	+0.2
1,045,309	+		ABIE53_004828	0.16	-1.7
1,045,309	+		ABIE53_004828	0.16	+0.7
1,045,310	-		ABIE53_004828	0.16	-0.6
1,045,310	-		ABIE53_004828	0.16	-1.2
1,045,310	-		ABIE53_004828	0.16	-0.8
1,045,310	-		ABIE53_004828	0.16	-1.7
1,045,310	-		ABIE53_004828	0.16	-2.0
1,045,310	-		ABIE53_004828	0.16	+0.7
1,045,310	-		ABIE53_004828	0.16	+0.2
1,045,310	-		ABIE53_004828	0.16	-0.9
1,045,323	+		ABIE53_004828	0.17	-1.1
1,045,325	+		ABIE53_004828	0.17	-1.5
1,045,325	+		ABIE53_004828	0.17	+0.0
1,045,325	+		ABIE53_004828	0.17	-0.8
1,045,325	+		ABIE53_004828	0.17	-0.2
1,045,326	-		ABIE53_004828	0.17	-2.0
1,045,326	-		ABIE53_004828	0.17	-4.2
1,045,326	-		ABIE53_004828	0.17	-1.8
1,045,326	-		ABIE53_004828	0.17	-1.5
1,045,326	-		ABIE53_004828	0.17	-2.2
1,045,426	-		ABIE53_004828	0.19	-0.4
1,045,426	-		ABIE53_004828	0.19	+0.0
1,045,449	-		ABIE53_004828	0.20	-1.0
1,045,526	+		ABIE53_004828	0.22	-0.8
1,045,526	+		ABIE53_004828	0.22	+0.4
1,045,526	+		ABIE53_004828	0.22	-1.9
1,045,526	+		ABIE53_004828	0.22	-0.5
1,045,526	+		ABIE53_004828	0.22	-1.9
1,045,526	+		ABIE53_004828	0.22	-0.1
1,045,526	+		ABIE53_004828	0.22	-0.8
1,045,527	-		ABIE53_004828	0.22	-3.7
1,045,527	-		ABIE53_004828	0.22	-1.1
1,045,527	-		ABIE53_004828	0.22	-3.1
1,045,527	-		ABIE53_004828	0.22	-2.4
1,045,527	-		ABIE53_004828	0.22	-1.8
1,045,527	-		ABIE53_004828	0.22	-1.4
1,045,527	-		ABIE53_004828	0.22	-1.9
1,045,527	-		ABIE53_004828	0.22	-1.5
1,045,532	+		ABIE53_004828	0.23	-1.3
1,045,532	+		ABIE53_004828	0.23	+0.2
1,045,533	-		ABIE53_004828	0.23	-1.6
1,045,533	-		ABIE53_004828	0.23	-0.3
1,045,533	-		ABIE53_004828	0.23	+0.2
1,045,533	-		ABIE53_004828	0.23	-1.5
1,045,533	-		ABIE53_004828	0.23	-4.6
1,045,693	-		ABIE53_004828	0.27	-2.3
1,045,755	+		ABIE53_004828	0.29	-2.5
1,045,755	+		ABIE53_004828	0.29	+1.4
1,045,756	-		ABIE53_004828	0.29	+0.0
1,045,756	-		ABIE53_004828	0.29	-0.3
1,045,756	-		ABIE53_004828	0.29	+0.0
1,045,769	+		ABIE53_004828	0.29	-1.2
1,045,769	+		ABIE53_004828	0.29	+1.0
1,045,769	+		ABIE53_004828	0.29	-0.4
1,045,769	+		ABIE53_004828	0.29	-0.7
1,045,769	+		ABIE53_004828	0.29	-1.2
1,045,769	+		ABIE53_004828	0.29	-1.4
1,045,769	+		ABIE53_004828	0.29	-0.5
1,045,769	+		ABIE53_004828	0.29	+0.6
1,045,769	+		ABIE53_004828	0.29	+0.7
1,045,769	+		ABIE53_004828	0.29	-0.9
1,045,769	+		ABIE53_004828	0.29	-2.0
1,045,769	+		ABIE53_004828	0.29	-1.4
1,045,769	+		ABIE53_004828	0.29	+1.0
1,045,769	+		ABIE53_004828	0.29	-0.1
1,045,769	+		ABIE53_004828	0.29	+0.7
1,045,769	+		ABIE53_004828	0.29	+0.2
1,045,770	-		ABIE53_004828	0.29	-1.3
1,045,770	-		ABIE53_004828	0.29	+1.0
1,045,770	-		ABIE53_004828	0.29	-1.7
1,045,770	-		ABIE53_004828	0.29	+0.4
1,045,770	-		ABIE53_004828	0.29	-1.2
1,045,770	-		ABIE53_004828	0.29	-1.3
1,045,770	-		ABIE53_004828	0.29	-2.7
1,045,770	-		ABIE53_004828	0.29	-0.8
1,045,770	-		ABIE53_004828	0.29	-1.3
1,045,770	-		ABIE53_004828	0.29	-1.0
1,045,796	+		ABIE53_004828	0.30	-0.5
1,045,796	+		ABIE53_004828	0.30	-3.1
1,045,796	+		ABIE53_004828	0.30	+0.7
1,045,797	-		ABIE53_004828	0.30	-2.2
1,045,797	-		ABIE53_004828	0.30	-2.5
1,046,025	-		ABIE53_004828	0.37	-2.8
1,046,115	-		ABIE53_004828	0.39	-1.2
1,046,115	-		ABIE53_004828	0.39	-1.3
1,046,115	-		ABIE53_004828	0.39	-2.9
1,046,222	+		ABIE53_004828	0.42	-1.7
1,046,222	+		ABIE53_004828	0.42	-2.3
1,046,223	-		ABIE53_004828	0.42	+3.0
1,046,223	-		ABIE53_004828	0.42	-1.5
1,046,223	-		ABIE53_004828	0.42	-3.8
1,046,267	+		ABIE53_004828	0.44	-0.6
1,046,267	+		ABIE53_004828	0.44	-1.0
1,046,267	+		ABIE53_004828	0.44	-1.9
1,046,268	-		ABIE53_004828	0.44	-1.4
1,046,268	-		ABIE53_004828	0.44	-2.8
1,046,268	-		ABIE53_004828	0.44	-1.8
1,046,268	-		ABIE53_004828	0.44	-0.9
1,047,317	-		ABIE53_004828	0.74	+0.7
1,047,317	-		ABIE53_004828	0.74	+0.2
1,047,447	+		ABIE53_004828	0.78	-2.3
1,047,447	+		ABIE53_004828	0.78	+1.0
1,047,448	-		ABIE53_004828	0.78	+0.2
1,047,453	-		ABIE53_004828	0.78	-1.9
1,047,453	-		ABIE53_004828	0.78	-1.3
1,047,503	+		ABIE53_004828	0.79	-1.3
1,047,504	-		ABIE53_004828	0.79	-1.2
1,047,530	+		ABIE53_004828	0.80	-0.1
1,047,530	+		ABIE53_004828	0.80	+0.0
1,047,531	-		ABIE53_004828	0.80	+2.4
1,047,531	-		ABIE53_004828	0.80	+1.0
1,047,806	+		ABIE53_004828	0.88	+0.1
1,047,807	-		ABIE53_004828	0.88	-1.0
1,047,896	+				+0.7
1,047,897	-				-1.3
1,047,897	-				-1.4
1,047,988	-				+1.4
1,048,181	+				-0.7
1,048,327	+				+2.1
1,048,327	+				-1.0
1,048,327	+				+0.6
1,048,327	+				-1.3
1,048,328	-				-1.0
1,048,328	-				-1.3
1,048,328	-				-0.5
1,048,340	+				+0.1
1,048,340	+				-1.9
1,048,340	+				-1.1
1,048,340	+				+0.2
1,048,340	+				-0.9
1,048,341	-				+1.1
1,048,341	-				-0.2
1,048,341	-				+0.4
1,048,341	-				-0.8
1,048,341	-				-0.3
1,048,341	-				-0.8
1,048,341	-				+0.2
1,048,371	+				+1.3
1,048,371	+				-0.4
1,048,371	+				+0.3
1,048,466	-				-0.2
1,048,488	-				+0.0
1,048,546	+				-1.2
1,048,573	+				-3.0
1,048,574	-				+0.4
1,048,574	-				-0.7
1,048,718	+				-1.0
1,048,718	+				-1.0
1,048,719	-		ABIE53_004829	0.10	-0.7
1,048,719	-		ABIE53_004829	0.10	+1.4
1,048,719	-		ABIE53_004829	0.10	+0.8
1,048,820	+		ABIE53_004829	0.26	+0.4
1,048,820	+		ABIE53_004829	0.26	-0.8
1,048,820	+		ABIE53_004829	0.26	-0.1
1,048,820	+		ABIE53_004829	0.26	+0.8
1,048,820	+		ABIE53_004829	0.26	-0.7
1,048,820	+		ABIE53_004829	0.26	+0.2
1,048,820	+		ABIE53_004829	0.26	+0.4
1,048,820	+		ABIE53_004829	0.26	+1.4
1,048,821	-		ABIE53_004829	0.27	-0.2
1,048,821	-		ABIE53_004829	0.27	+0.2
1,048,821	-		ABIE53_004829	0.27	-0.3
1,048,835	+		ABIE53_004829	0.29	+1.0
1,048,835	+		ABIE53_004829	0.29	+0.2
1,048,836	-		ABIE53_004829	0.29	-0.2
1,048,895	+		ABIE53_004829	0.39	+0.5
1,048,895	+		ABIE53_004829	0.39	+0.3
1,048,895	+		ABIE53_004829	0.39	+1.6
1,048,896	-		ABIE53_004829	0.39	+0.4
1,048,896	-		ABIE53_004829	0.39	-0.4
1,048,896	-		ABIE53_004829	0.39	-0.2
1,048,898	+		ABIE53_004829	0.39	+0.6
1,048,898	+		ABIE53_004829	0.39	+0.1
1,048,898	+		ABIE53_004829	0.39	-0.4
1,048,898	+		ABIE53_004829	0.39	+0.2
1,048,899	-		ABIE53_004829	0.39	+1.4
1,048,899	-		ABIE53_004829	0.39	-0.4
1,048,910	+		ABIE53_004829	0.41	-1.5
1,048,910	+		ABIE53_004829	0.41	-0.8
1,048,911	-		ABIE53_004829	0.41	+0.0
1,048,911	-		ABIE53_004829	0.41	-1.2
1,048,911	-		ABIE53_004829	0.41	+1.0
1,048,976	+		ABIE53_004829	0.52	-0.6
1,048,976	+		ABIE53_004829	0.52	+0.0
1,048,976	+		ABIE53_004829	0.52	+1.4
1,048,977	-		ABIE53_004829	0.52	-1.0
1,048,977	-		ABIE53_004829	0.52	-3.0
1,048,977	-		ABIE53_004829	0.52	+0.2
1,048,977	-		ABIE53_004829	0.52	+0.3
1,048,977	-		ABIE53_004829	0.52	+0.1
1,048,977	-		ABIE53_004829	0.52	+0.2
1,049,065	+		ABIE53_004829	0.66	-0.7
1,049,065	+		ABIE53_004829	0.66	-1.8
1,049,065	+		ABIE53_004829	0.66	-0.0
1,049,168	+		ABIE53_004829	0.83	+0.2
1,049,168	+		ABIE53_004829	0.83	+2.0
1,049,168	+		ABIE53_004829	0.83	-0.8
1,049,168	+		ABIE53_004829	0.83	+0.2
1,049,168	+		ABIE53_004829	0.83	-0.3
1,049,169	-		ABIE53_004829	0.83	+2.0
1,049,169	-		ABIE53_004829	0.83	-1.4
1,049,200	+		ABIE53_004829	0.88	-1.0
1,049,201	-		ABIE53_004829	0.88	+2.3