Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03026 and SMc03027 are separated by 307 nucleotides SMc03027 and SMc03028 are separated by 6 nucleotides SMc03028 and SMc03029 overlap by 1 nucleotides SMc03029 and SMc03030 are separated by 11 nucleotides
SMc03026: SMc03026 - hypothetical protein, at 724,079 to 724,630
SMc03026
SMc03027: SMc03027 - flagellar basal body rod protein FlgB, at 724,938 to 725,318
SMc03027
SMc03028: SMc03028 - flagellar basal body rod protein FlgC, at 725,325 to 725,744
SMc03028
SMc03029: SMc03029 - flagellar hook-basal body protein FliE, at 725,744 to 726,079
SMc03029
SMc03030: SMc03030 - flagellar basal body rod protein FlgG, at 726,091 to 726,879
SMc03030
Position (kb) 725
726 Strain fitness (log2 ratio) -1
0
1 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.516 kb on + strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.526 kb on - strand, within SMc03026 at 724.828 kb on - strand at 724.863 kb on + strand at 724.863 kb on + strand at 724.864 kb on - strand at 724.864 kb on - strand at 724.909 kb on - strand at 725.202 kb on - strand, within SMc03027 at 725.202 kb on - strand, within SMc03027 at 725.253 kb on + strand, within SMc03027 at 725.316 kb on + strand at 725.317 kb on - strand at 725.317 kb on - strand at 725.349 kb on - strand at 725.621 kb on + strand, within SMc03028 at 725.665 kb on - strand, within SMc03028 at 725.742 kb on + strand at 725.742 kb on + strand at 725.767 kb on - strand at 725.767 kb on - strand at 725.767 kb on - strand at 726.051 kb on - strand at 726.493 kb on - strand, within SMc03030 at 726.493 kb on - strand, within SMc03030 at 726.742 kb on + strand, within SMc03030 at 726.743 kb on - strand, within SMc03030
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 724,514 + SMc03026 0.79 +0.4 724,514 + SMc03026 0.79 +0.5 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 +0.1 724,514 + SMc03026 0.79 -1.3 724,514 + SMc03026 0.79 +0.6 724,514 + SMc03026 0.79 -0.6 724,514 + SMc03026 0.79 +0.4 724,514 + SMc03026 0.79 -0.2 724,515 - SMc03026 0.79 -0.3 724,515 - SMc03026 0.79 -0.5 724,515 - SMc03026 0.79 +0.0 724,515 - SMc03026 0.79 -0.7 724,515 - SMc03026 0.79 +0.2 724,515 - SMc03026 0.79 -0.5 724,516 + SMc03026 0.79 -0.7 724,517 - SMc03026 0.79 +0.4 724,517 - SMc03026 0.79 +1.0 724,526 - SMc03026 0.81 +0.2 724,828 - -1.0 724,863 + -0.8 724,863 + +0.7 724,864 - -0.6 724,864 - -0.4 724,909 - -1.0 725,202 - SMc03027 0.69 +0.0 725,202 - SMc03027 0.69 +0.3 725,253 + SMc03027 0.83 -0.3 725,316 + -0.2 725,317 - -0.0 725,317 - +0.6 725,349 - -0.2 725,621 + SMc03028 0.70 -1.0 725,665 - SMc03028 0.81 -0.7 725,742 + +0.2 725,742 + +0.6 725,767 - +0.0 725,767 - -1.1 725,767 - +0.6 726,051 - +0.9 726,493 - SMc03030 0.51 +1.5 726,493 - SMc03030 0.51 -0.9 726,742 + SMc03030 0.83 +0.5 726,743 - SMc03030 0.83 +0.6
Or see this region's nucleotide sequence