Experiment: LB, pH6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00120 and SMc00062 are separated by 252 nucleotides SMc00062 and SMc00063 are separated by 154 nucleotides
SMc00120: SMc00120 - hypothetical protein, at 1,096,742 to 1,097,797
SMc00120
SMc00062: SMc00062 - hypothetical protein, at 1,098,050 to 1,098,685
SMc00062
SMc00063: SMc00063 - hypothetical protein, at 1,098,840 to 1,099,124
SMc00063
Position (kb)
1098
1099 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1097.841 kb on - strand at 1097.866 kb on - strand at 1097.870 kb on - strand at 1097.870 kb on - strand at 1097.886 kb on + strand at 1097.945 kb on + strand at 1097.952 kb on - strand at 1098.154 kb on + strand, within SMc00062 at 1098.158 kb on + strand, within SMc00062 at 1098.158 kb on + strand, within SMc00062 at 1098.159 kb on - strand at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.159 kb on - strand, within SMc00062 at 1098.162 kb on - strand, within SMc00062 at 1098.249 kb on - strand, within SMc00062 at 1098.278 kb on + strand, within SMc00062 at 1098.278 kb on + strand, within SMc00062 at 1098.312 kb on - strand, within SMc00062 at 1098.312 kb on - strand, within SMc00062 at 1098.326 kb on + strand, within SMc00062 at 1098.329 kb on + strand, within SMc00062 at 1098.330 kb on - strand, within SMc00062 at 1098.374 kb on + strand, within SMc00062 at 1098.375 kb on - strand, within SMc00062 at 1098.390 kb on - strand, within SMc00062 at 1098.626 kb on + strand at 1098.812 kb on - strand at 1099.374 kb on - strand at 1099.378 kb on + strand at 1099.379 kb on - strand at 1099.400 kb on + strand at 1099.400 kb on + strand at 1099.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB, pH6 remove 1,097,841 - +1.7 1,097,866 - +2.0 1,097,870 - +1.9 1,097,870 - +1.5 1,097,886 + -2.1 1,097,945 + -1.2 1,097,952 - +0.8 1,098,154 + SMc00062 0.16 -0.4 1,098,158 + SMc00062 0.17 -0.1 1,098,158 + SMc00062 0.17 -2.4 1,098,159 - +0.1 1,098,159 - SMc00062 0.17 -1.2 1,098,159 - SMc00062 0.17 +0.3 1,098,159 - SMc00062 0.17 -0.1 1,098,159 - SMc00062 0.17 +0.1 1,098,159 - SMc00062 0.17 +0.1 1,098,159 - SMc00062 0.17 -0.3 1,098,159 - SMc00062 0.17 -0.7 1,098,159 - SMc00062 0.17 +0.7 1,098,159 - SMc00062 0.17 -0.2 1,098,159 - SMc00062 0.17 +0.6 1,098,162 - SMc00062 0.18 -0.3 1,098,249 - SMc00062 0.31 -0.2 1,098,278 + SMc00062 0.36 -0.1 1,098,278 + SMc00062 0.36 -0.7 1,098,312 - SMc00062 0.41 +0.4 1,098,312 - SMc00062 0.41 -0.6 1,098,326 + SMc00062 0.43 -1.9 1,098,329 + SMc00062 0.44 -1.1 1,098,330 - SMc00062 0.44 +0.0 1,098,374 + SMc00062 0.51 -1.0 1,098,375 - SMc00062 0.51 -0.1 1,098,390 - SMc00062 0.53 +1.6 1,098,626 + -1.0 1,098,812 - -0.0 1,099,374 - -1.6 1,099,378 + +0.3 1,099,379 - +0.6 1,099,400 + +3.8 1,099,400 + +5.2 1,099,423 + +0.8
Or see this region's nucleotide sequence