Experiment: Collected from freezer stock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS00075 and MMJJ_RS00080 overlap by 4 nucleotides MMJJ_RS00080 and MMJJ_RS00085 are separated by 218 nucleotides MMJJ_RS00085 and MMJJ_RS00090 are separated by 51 nucleotides MMJJ_RS00090 and MMJJ_RS00095 overlap by 14 nucleotides
MMJJ_RS00075: MMJJ_RS00075 - AAA family ATPase, at 14,749 to 15,531
_RS00075
MMJJ_RS00080: MMJJ_RS00080 - DUF166 domain-containing protein, at 15,528 to 16,184
_RS00080
MMJJ_RS00085: MMJJ_RS00085 - substrate-binding domain-containing protein, at 16,403 to 17,254
_RS00085
MMJJ_RS00090: MMJJ_RS00090 - 4Fe-4S binding protein, at 17,306 to 17,965
_RS00090
MMJJ_RS00095: MMJJ_RS00095 - permease, at 17,952 to 18,809
_RS00095
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 15.409 kb on - strand, within MMJJ_RS00075 at 15.433 kb on - strand, within MMJJ_RS00075 at 15.434 kb on + strand, within MMJJ_RS00075 at 15.464 kb on + strand at 15.464 kb on + strand at 15.465 kb on - strand at 15.465 kb on - strand at 15.465 kb on - strand at 15.465 kb on - strand at 15.466 kb on + strand at 15.473 kb on + strand at 15.516 kb on - strand at 15.655 kb on + strand, within MMJJ_RS00080 at 15.655 kb on + strand, within MMJJ_RS00080 at 15.748 kb on + strand, within MMJJ_RS00080 at 15.748 kb on + strand, within MMJJ_RS00080 at 15.832 kb on + strand, within MMJJ_RS00080 at 15.876 kb on - strand, within MMJJ_RS00080 at 15.876 kb on - strand, within MMJJ_RS00080 at 15.876 kb on - strand, within MMJJ_RS00080 at 15.937 kb on + strand, within MMJJ_RS00080 at 15.937 kb on + strand, within MMJJ_RS00080 at 15.937 kb on + strand, within MMJJ_RS00080 at 15.937 kb on + strand, within MMJJ_RS00080 at 15.937 kb on + strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.939 kb on - strand, within MMJJ_RS00080 at 15.940 kb on + strand, within MMJJ_RS00080 at 15.940 kb on + strand, within MMJJ_RS00080 at 15.940 kb on + strand, within MMJJ_RS00080 at 15.941 kb on - strand, within MMJJ_RS00080 at 15.941 kb on - strand, within MMJJ_RS00080 at 15.941 kb on - strand, within MMJJ_RS00080 at 15.941 kb on - strand, within MMJJ_RS00080 at 15.942 kb on + strand, within MMJJ_RS00080 at 15.942 kb on + strand, within MMJJ_RS00080 at 15.942 kb on + strand, within MMJJ_RS00080 at 15.942 kb on + strand, within MMJJ_RS00080 at 15.944 kb on + strand, within MMJJ_RS00080 at 15.958 kb on - strand, within MMJJ_RS00080 at 15.997 kb on + strand, within MMJJ_RS00080 at 15.997 kb on + strand, within MMJJ_RS00080 at 15.999 kb on - strand, within MMJJ_RS00080 at 16.003 kb on - strand, within MMJJ_RS00080 at 16.003 kb on - strand, within MMJJ_RS00080 at 16.003 kb on - strand, within MMJJ_RS00080 at 16.004 kb on + strand, within MMJJ_RS00080 at 16.004 kb on + strand, within MMJJ_RS00080 at 16.074 kb on + strand, within MMJJ_RS00080 at 16.074 kb on + strand, within MMJJ_RS00080 at 16.100 kb on - strand, within MMJJ_RS00080 at 16.103 kb on - strand, within MMJJ_RS00080 at 16.103 kb on - strand, within MMJJ_RS00080 at 16.105 kb on - strand, within MMJJ_RS00080 at 16.127 kb on - strand at 16.139 kb on + strand at 16.139 kb on + strand at 16.212 kb on - strand at 16.212 kb on - strand at 16.214 kb on - strand at 16.215 kb on + strand at 16.215 kb on + strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.226 kb on - strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.227 kb on + strand at 16.228 kb on - strand at 16.228 kb on - strand at 16.229 kb on + strand at 16.229 kb on + strand at 16.230 kb on - strand at 16.230 kb on - strand at 16.235 kb on + strand at 16.266 kb on + strand at 16.307 kb on - strand at 16.307 kb on - strand at 16.307 kb on - strand at 16.307 kb on - strand at 16.308 kb on + strand at 16.308 kb on + strand at 16.308 kb on + strand at 16.336 kb on + strand at 16.349 kb on + strand at 16.400 kb on - strand at 16.401 kb on + strand at 16.401 kb on + strand at 16.415 kb on - strand at 16.468 kb on - strand at 16.469 kb on + strand at 16.724 kb on - strand, within MMJJ_RS00085 at 16.725 kb on + strand, within MMJJ_RS00085 at 16.725 kb on + strand, within MMJJ_RS00085 at 16.742 kb on + strand, within MMJJ_RS00085 at 16.759 kb on + strand, within MMJJ_RS00085 at 16.803 kb on - strand, within MMJJ_RS00085 at 16.803 kb on - strand, within MMJJ_RS00085 at 16.993 kb on - strand, within MMJJ_RS00085 at 17.001 kb on - strand, within MMJJ_RS00085 at 17.002 kb on + strand, within MMJJ_RS00085 at 17.009 kb on + strand, within MMJJ_RS00085 at 17.020 kb on - strand, within MMJJ_RS00085 at 17.020 kb on - strand, within MMJJ_RS00085 at 17.065 kb on + strand, within MMJJ_RS00085 at 17.070 kb on - strand, within MMJJ_RS00085 at 17.071 kb on + strand, within MMJJ_RS00085 at 17.086 kb on - strand, within MMJJ_RS00085 at 17.093 kb on - strand, within MMJJ_RS00085 at 17.093 kb on - strand, within MMJJ_RS00085 at 17.093 kb on - strand, within MMJJ_RS00085 at 17.093 kb on - strand, within MMJJ_RS00085 at 17.093 kb on - strand, within MMJJ_RS00085 at 17.094 kb on + strand, within MMJJ_RS00085 at 17.094 kb on + strand, within MMJJ_RS00085 at 17.094 kb on + strand, within MMJJ_RS00085 at 17.094 kb on + strand, within MMJJ_RS00085 at 17.106 kb on - strand, within MMJJ_RS00085 at 17.106 kb on - strand, within MMJJ_RS00085 at 17.107 kb on + strand, within MMJJ_RS00085 at 17.107 kb on + strand, within MMJJ_RS00085 at 17.117 kb on - strand, within MMJJ_RS00085 at 17.117 kb on - strand, within MMJJ_RS00085 at 17.117 kb on - strand, within MMJJ_RS00085 at 17.117 kb on - strand, within MMJJ_RS00085 at 17.117 kb on - strand, within MMJJ_RS00085 at 17.118 kb on + strand, within MMJJ_RS00085 at 17.118 kb on + strand, within MMJJ_RS00085 at 17.118 kb on + strand, within MMJJ_RS00085 at 17.118 kb on + strand, within MMJJ_RS00085 at 17.123 kb on - strand, within MMJJ_RS00085 at 17.158 kb on - strand, within MMJJ_RS00085 at 17.159 kb on + strand, within MMJJ_RS00085 at 17.179 kb on - strand at 17.187 kb on - strand at 17.187 kb on - strand at 17.187 kb on - strand at 17.188 kb on + strand at 17.211 kb on - strand at 17.212 kb on + strand at 17.213 kb on - strand at 17.222 kb on - strand at 17.223 kb on + strand at 17.249 kb on + strand at 17.253 kb on + strand at 17.275 kb on - strand at 17.281 kb on + strand at 17.329 kb on - strand at 17.329 kb on - strand at 17.335 kb on - strand at 17.403 kb on - strand, within MMJJ_RS00090 at 17.409 kb on - strand, within MMJJ_RS00090 at 17.415 kb on - strand, within MMJJ_RS00090 at 17.445 kb on - strand, within MMJJ_RS00090 at 17.469 kb on - strand, within MMJJ_RS00090 at 17.469 kb on - strand, within MMJJ_RS00090 at 17.469 kb on - strand, within MMJJ_RS00090 at 17.470 kb on + strand, within MMJJ_RS00090 at 17.522 kb on - strand, within MMJJ_RS00090 at 17.522 kb on - strand, within MMJJ_RS00090 at 17.523 kb on + strand, within MMJJ_RS00090 at 17.533 kb on - strand, within MMJJ_RS00090 at 17.559 kb on - strand, within MMJJ_RS00090 at 17.559 kb on - strand, within MMJJ_RS00090 at 17.560 kb on + strand, within MMJJ_RS00090 at 17.577 kb on - strand, within MMJJ_RS00090 at 17.577 kb on - strand, within MMJJ_RS00090 at 17.631 kb on - strand at 17.649 kb on - strand, within MMJJ_RS00090 at 17.653 kb on + strand, within MMJJ_RS00090 at 17.662 kb on + strand, within MMJJ_RS00090 at 17.723 kb on - strand, within MMJJ_RS00090 at 17.727 kb on - strand, within MMJJ_RS00090 at 17.793 kb on + strand, within MMJJ_RS00090 at 17.795 kb on - strand, within MMJJ_RS00090 at 17.806 kb on - strand, within MMJJ_RS00090 at 17.806 kb on - strand, within MMJJ_RS00090 at 17.807 kb on + strand, within MMJJ_RS00090 at 17.807 kb on + strand, within MMJJ_RS00090 at 17.809 kb on + strand, within MMJJ_RS00090 at 17.809 kb on + strand, within MMJJ_RS00090 at 17.809 kb on + strand, within MMJJ_RS00090 at 17.809 kb on - strand, within MMJJ_RS00090 at 17.833 kb on + strand, within MMJJ_RS00090 at 17.864 kb on - strand, within MMJJ_RS00090 at 17.865 kb on + strand, within MMJJ_RS00090 at 17.866 kb on - strand, within MMJJ_RS00090 at 17.866 kb on - strand, within MMJJ_RS00090 at 17.866 kb on - strand, within MMJJ_RS00090 at 17.867 kb on + strand, within MMJJ_RS00090 at 17.867 kb on + strand, within MMJJ_RS00090 at 17.978 kb on + strand at 17.996 kb on - strand at 18.022 kb on + strand at 18.025 kb on - strand at 18.026 kb on + strand at 18.026 kb on + strand at 18.054 kb on + strand, within MMJJ_RS00095 at 18.098 kb on - strand, within MMJJ_RS00095 at 18.098 kb on - strand, within MMJJ_RS00095 at 18.098 kb on - strand, within MMJJ_RS00095 at 18.098 kb on - strand, within MMJJ_RS00095 at 18.099 kb on + strand, within MMJJ_RS00095 at 18.099 kb on + strand, within MMJJ_RS00095 at 18.099 kb on + strand, within MMJJ_RS00095 at 18.099 kb on + strand, within MMJJ_RS00095 at 18.100 kb on - strand, within MMJJ_RS00095 at 18.100 kb on - strand, within MMJJ_RS00095 at 18.101 kb on + strand, within MMJJ_RS00095 at 18.108 kb on + strand, within MMJJ_RS00095 at 18.125 kb on + strand, within MMJJ_RS00095 at 18.151 kb on - strand, within MMJJ_RS00095 at 18.161 kb on + strand, within MMJJ_RS00095 at 18.161 kb on + strand, within MMJJ_RS00095 at 18.225 kb on + strand, within MMJJ_RS00095 at 18.237 kb on + strand, within MMJJ_RS00095
Per-strain Table
Position Strand Gene LocusTag Fraction Collected from freezer stock remove 15,409 - MMJJ_RS00075 0.84 +0.9 15,433 - MMJJ_RS00075 0.87 -0.5 15,434 + MMJJ_RS00075 0.87 +0.0 15,464 + -0.3 15,464 + -0.8 15,465 - -0.2 15,465 - -0.5 15,465 - +1.9 15,465 - +0.1 15,466 + -0.6 15,473 + -0.3 15,516 - +1.0 15,655 + MMJJ_RS00080 0.19 -0.2 15,655 + MMJJ_RS00080 0.19 +0.3 15,748 + MMJJ_RS00080 0.33 -0.1 15,748 + MMJJ_RS00080 0.33 +0.5 15,832 + MMJJ_RS00080 0.46 -0.1 15,876 - MMJJ_RS00080 0.53 +0.7 15,876 - MMJJ_RS00080 0.53 +0.3 15,876 - MMJJ_RS00080 0.53 +0.0 15,937 + MMJJ_RS00080 0.62 -0.8 15,937 + MMJJ_RS00080 0.62 +0.1 15,937 + MMJJ_RS00080 0.62 +0.2 15,937 + MMJJ_RS00080 0.62 +1.0 15,937 + MMJJ_RS00080 0.62 -0.5 15,939 - MMJJ_RS00080 0.63 +0.3 15,939 - MMJJ_RS00080 0.63 +0.4 15,939 - MMJJ_RS00080 0.63 +0.2 15,939 - MMJJ_RS00080 0.63 -0.3 15,939 - MMJJ_RS00080 0.63 -0.4 15,939 - MMJJ_RS00080 0.63 +0.5 15,939 - MMJJ_RS00080 0.63 +0.7 15,940 + MMJJ_RS00080 0.63 +0.3 15,940 + MMJJ_RS00080 0.63 +0.1 15,940 + MMJJ_RS00080 0.63 -0.6 15,941 - MMJJ_RS00080 0.63 -0.5 15,941 - MMJJ_RS00080 0.63 -0.1 15,941 - MMJJ_RS00080 0.63 +0.3 15,941 - MMJJ_RS00080 0.63 +0.7 15,942 + MMJJ_RS00080 0.63 +1.0 15,942 + MMJJ_RS00080 0.63 -0.2 15,942 + MMJJ_RS00080 0.63 -0.6 15,942 + MMJJ_RS00080 0.63 +0.2 15,944 + MMJJ_RS00080 0.63 +1.2 15,958 - MMJJ_RS00080 0.65 -0.0 15,997 + MMJJ_RS00080 0.71 -0.1 15,997 + MMJJ_RS00080 0.71 +2.3 15,999 - MMJJ_RS00080 0.72 -0.3 16,003 - MMJJ_RS00080 0.72 +1.7 16,003 - MMJJ_RS00080 0.72 -0.5 16,003 - MMJJ_RS00080 0.72 -0.0 16,004 + MMJJ_RS00080 0.72 -0.2 16,004 + MMJJ_RS00080 0.72 -0.3 16,074 + MMJJ_RS00080 0.83 +0.2 16,074 + MMJJ_RS00080 0.83 +0.1 16,100 - MMJJ_RS00080 0.87 -0.0 16,103 - MMJJ_RS00080 0.88 +1.2 16,103 - MMJJ_RS00080 0.88 -0.1 16,105 - MMJJ_RS00080 0.88 +0.1 16,127 - -0.3 16,139 + -0.6 16,139 + +0.0 16,212 - +1.1 16,212 - +1.1 16,214 - -0.3 16,215 + +0.3 16,215 + +0.2 16,226 - +0.1 16,226 - +2.1 16,226 - +0.8 16,226 - +0.0 16,226 - +0.9 16,226 - -1.1 16,226 - -0.4 16,227 + +1.7 16,227 + -0.8 16,227 + +0.3 16,227 + +0.6 16,227 + +0.4 16,227 + -0.3 16,227 + +0.5 16,227 + -1.0 16,228 - -0.2 16,228 - +0.0 16,229 + +0.4 16,229 + -0.0 16,230 - +0.5 16,230 - +0.1 16,235 + -0.2 16,266 + -0.3 16,307 - -0.4 16,307 - -1.8 16,307 - +1.5 16,307 - +1.7 16,308 + +0.1 16,308 + -0.6 16,308 + -0.7 16,336 + +0.2 16,349 + +0.4 16,400 - -0.2 16,401 + -0.6 16,401 + +0.6 16,415 - -0.4 16,468 - +0.7 16,469 + -0.0 16,724 - MMJJ_RS00085 0.38 +0.4 16,725 + MMJJ_RS00085 0.38 +0.2 16,725 + MMJJ_RS00085 0.38 +1.7 16,742 + MMJJ_RS00085 0.40 +0.1 16,759 + MMJJ_RS00085 0.42 +0.2 16,803 - MMJJ_RS00085 0.47 +0.1 16,803 - MMJJ_RS00085 0.47 -0.3 16,993 - MMJJ_RS00085 0.69 -0.3 17,001 - MMJJ_RS00085 0.70 -0.3 17,002 + MMJJ_RS00085 0.70 +0.1 17,009 + MMJJ_RS00085 0.71 -0.4 17,020 - MMJJ_RS00085 0.72 +0.6 17,020 - MMJJ_RS00085 0.72 -0.3 17,065 + MMJJ_RS00085 0.78 -0.3 17,070 - MMJJ_RS00085 0.78 +0.4 17,071 + MMJJ_RS00085 0.78 +0.4 17,086 - MMJJ_RS00085 0.80 +0.1 17,093 - MMJJ_RS00085 0.81 +0.2 17,093 - MMJJ_RS00085 0.81 -0.6 17,093 - MMJJ_RS00085 0.81 -0.2 17,093 - MMJJ_RS00085 0.81 -0.1 17,093 - MMJJ_RS00085 0.81 -0.9 17,094 + MMJJ_RS00085 0.81 -0.8 17,094 + MMJJ_RS00085 0.81 -0.3 17,094 + MMJJ_RS00085 0.81 -0.5 17,094 + MMJJ_RS00085 0.81 +0.1 17,106 - MMJJ_RS00085 0.83 +0.3 17,106 - MMJJ_RS00085 0.83 -0.3 17,107 + MMJJ_RS00085 0.83 -0.2 17,107 + MMJJ_RS00085 0.83 -0.6 17,117 - MMJJ_RS00085 0.84 +0.1 17,117 - MMJJ_RS00085 0.84 -1.8 17,117 - MMJJ_RS00085 0.84 -0.6 17,117 - MMJJ_RS00085 0.84 +0.1 17,117 - MMJJ_RS00085 0.84 -0.5 17,118 + MMJJ_RS00085 0.84 -0.9 17,118 + MMJJ_RS00085 0.84 -0.6 17,118 + MMJJ_RS00085 0.84 +0.1 17,118 + MMJJ_RS00085 0.84 +0.3 17,123 - MMJJ_RS00085 0.85 -0.3 17,158 - MMJJ_RS00085 0.89 -0.0 17,159 + MMJJ_RS00085 0.89 +0.4 17,179 - -0.3 17,187 - +1.3 17,187 - -0.4 17,187 - -0.3 17,188 + -0.7 17,211 - +0.2 17,212 + -1.4 17,213 - +0.1 17,222 - -0.4 17,223 + +0.3 17,249 + -0.9 17,253 + +0.5 17,275 - -0.1 17,281 + +0.7 17,329 - +1.3 17,329 - -0.1 17,335 - +0.1 17,403 - MMJJ_RS00090 0.15 +0.5 17,409 - MMJJ_RS00090 0.16 -0.4 17,415 - MMJJ_RS00090 0.17 -0.4 17,445 - MMJJ_RS00090 0.21 -1.3 17,469 - MMJJ_RS00090 0.25 +0.1 17,469 - MMJJ_RS00090 0.25 +0.5 17,469 - MMJJ_RS00090 0.25 +0.2 17,470 + MMJJ_RS00090 0.25 +1.4 17,522 - MMJJ_RS00090 0.33 +0.1 17,522 - MMJJ_RS00090 0.33 +0.3 17,523 + MMJJ_RS00090 0.33 +0.1 17,533 - MMJJ_RS00090 0.34 -0.2 17,559 - MMJJ_RS00090 0.38 +0.1 17,559 - MMJJ_RS00090 0.38 +0.6 17,560 + MMJJ_RS00090 0.38 -0.7 17,577 - MMJJ_RS00090 0.41 -0.1 17,577 - MMJJ_RS00090 0.41 -0.3 17,631 - +0.7 17,649 - MMJJ_RS00090 0.52 +0.1 17,653 + MMJJ_RS00090 0.53 +0.5 17,662 + MMJJ_RS00090 0.54 +0.3 17,723 - MMJJ_RS00090 0.63 -0.4 17,727 - MMJJ_RS00090 0.64 -0.7 17,793 + MMJJ_RS00090 0.74 -0.8 17,795 - MMJJ_RS00090 0.74 +0.5 17,806 - MMJJ_RS00090 0.76 +0.6 17,806 - MMJJ_RS00090 0.76 -0.3 17,807 + MMJJ_RS00090 0.76 -0.4 17,807 + MMJJ_RS00090 0.76 +0.1 17,809 + MMJJ_RS00090 0.76 -0.6 17,809 + MMJJ_RS00090 0.76 +0.3 17,809 + MMJJ_RS00090 0.76 -1.4 17,809 - MMJJ_RS00090 0.76 -0.1 17,833 + MMJJ_RS00090 0.80 -0.6 17,864 - MMJJ_RS00090 0.85 -0.6 17,865 + MMJJ_RS00090 0.85 -0.2 17,866 - MMJJ_RS00090 0.85 +0.0 17,866 - MMJJ_RS00090 0.85 -0.7 17,866 - MMJJ_RS00090 0.85 +1.1 17,867 + MMJJ_RS00090 0.85 -0.0 17,867 + MMJJ_RS00090 0.85 +0.3 17,978 + +0.4 17,996 - +0.2 18,022 + +0.7 18,025 - -0.6 18,026 + +0.1 18,026 + +0.4 18,054 + MMJJ_RS00095 0.12 +0.2 18,098 - MMJJ_RS00095 0.17 -0.0 18,098 - MMJJ_RS00095 0.17 +1.1 18,098 - MMJJ_RS00095 0.17 -0.0 18,098 - MMJJ_RS00095 0.17 -0.7 18,099 + MMJJ_RS00095 0.17 -0.6 18,099 + MMJJ_RS00095 0.17 +0.7 18,099 + MMJJ_RS00095 0.17 -0.6 18,099 + MMJJ_RS00095 0.17 +0.3 18,100 - MMJJ_RS00095 0.17 +0.5 18,100 - MMJJ_RS00095 0.17 +0.3 18,101 + MMJJ_RS00095 0.17 -0.6 18,108 + MMJJ_RS00095 0.18 +0.3 18,125 + MMJJ_RS00095 0.20 +0.1 18,151 - MMJJ_RS00095 0.23 +0.2 18,161 + MMJJ_RS00095 0.24 -0.4 18,161 + MMJJ_RS00095 0.24 +0.0 18,225 + MMJJ_RS00095 0.32 +0.1 18,237 + MMJJ_RS00095 0.33 -0.9
Or see this region's nucleotide sequence