Strain Fitness in Sinorhizobium meliloti 1021 around SMc04004

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,998,491	-		SMc04002	0.82	+1.7
2,998,768	+				+5.8
2,998,768	+				+6.0
2,998,768	+				+5.7
2,998,934	+		SMc04003	0.62	+7.1
2,998,935	-		SMc04003	0.63	+5.4
2,999,039	+				+2.3
2,999,505	+		SMc04004	0.57	+0.3
2,999,506	-		SMc04004	0.57	-1.2
2,999,578	+		SMc04004	0.68	+0.2
2,999,578	+		SMc04004	0.68	+0.8
2,999,579	-		SMc04004	0.69	-1.2
2,999,665	+		SMc04004	0.83	+0.0
2,999,700	+		SMc04004	0.88	+0.5
2,999,700	+		SMc04004	0.88	-0.7
2,999,701	-		SMc04004	0.88	+0.1
2,999,701	-		SMc04004	0.88	-0.6
2,999,701	-		SMc04004	0.88	-0.7
2,999,896	+				+0.7
2,999,897	-				+0.3
3,000,040	+				+0.2
3,000,041	-				+1.2
3,000,164	+		SMc04005	0.11	+0.6
3,000,165	-		SMc04005	0.11	+0.8
3,000,165	-		SMc04005	0.11	+0.4
3,000,319	+		SMc04005	0.22	+0.6
3,000,319	+		SMc04005	0.22	+0.8
3,000,320	-		SMc04005	0.22	+1.0
3,000,419	-		SMc04005	0.28	-1.4
3,000,496	+		SMc04005	0.34	+0.2
3,000,557	+		SMc04005	0.38	+0.8