Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00321 and SMc00322 are separated by 308 nucleotides SMc00322 and SMc00323 are separated by 238 nucleotides SMc00323 and SMc00324 are separated by 367 nucleotides
SMc00321: SMc00321 - tRNA pseudouridine synthase B, at 273,485 to 274,420
SMc00321
SMc00322: SMc00322 - hypothetical protein, at 274,729 to 276,447
SMc00322
SMc00323: SMc00323 - 30S ribosomal protein S15, at 276,686 to 276,955
SMc00323
SMc00324: SMc00324 - polynucleotide phosphorylase/polyadenylase, at 277,323 to 279,476
SMc00324
Position (kb) 274
275
276
277 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 273.896 kb on + strand, within SMc00321 at 273.897 kb on - strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.022 kb on + strand, within SMc00321 at 274.023 kb on - strand, within SMc00321 at 274.023 kb on - strand, within SMc00321 at 274.334 kb on + strand at 274.418 kb on + strand at 274.419 kb on - strand at 274.452 kb on + strand at 274.453 kb on - strand at 274.562 kb on - strand at 274.590 kb on + strand at 274.591 kb on - strand at 274.592 kb on + strand at 274.592 kb on + strand at 274.683 kb on - strand at 274.683 kb on - strand at 274.729 kb on - strand at 274.831 kb on + strand at 274.862 kb on + strand at 274.862 kb on + strand at 274.947 kb on + strand, within SMc00322 at 275.057 kb on - strand, within SMc00322 at 275.303 kb on - strand, within SMc00322 at 275.494 kb on - strand, within SMc00322 at 275.516 kb on - strand, within SMc00322 at 275.758 kb on + strand, within SMc00322 at 275.759 kb on - strand, within SMc00322 at 276.160 kb on - strand, within SMc00322 at 276.160 kb on - strand, within SMc00322 at 276.170 kb on + strand, within SMc00322 at 276.399 kb on - strand at 277.039 kb on + strand at 277.039 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 273,896 + SMc00321 0.44 +2.6 273,897 - SMc00321 0.44 +4.2 274,022 + SMc00321 0.57 +3.2 274,022 + SMc00321 0.57 +3.2 274,022 + SMc00321 0.57 +3.4 274,022 + SMc00321 0.57 +2.6 274,022 + SMc00321 0.57 +3.5 274,022 + SMc00321 0.57 +2.5 274,022 + SMc00321 0.57 +3.7 274,023 - SMc00321 0.57 +2.5 274,023 - SMc00321 0.57 +3.5 274,334 + +1.9 274,418 + -0.3 274,419 - +0.1 274,452 + +0.1 274,453 - +0.2 274,562 - -0.2 274,590 + -0.7 274,591 - -0.4 274,592 + +0.8 274,592 + +0.4 274,683 - +0.0 274,683 - -0.1 274,729 - +1.0 274,831 + +0.1 274,862 + -0.3 274,862 + -0.0 274,947 + SMc00322 0.13 +0.1 275,057 - SMc00322 0.19 -0.3 275,303 - SMc00322 0.33 +0.8 275,494 - SMc00322 0.45 +0.2 275,516 - SMc00322 0.46 +0.5 275,758 + SMc00322 0.60 -0.0 275,759 - SMc00322 0.60 +0.6 276,160 - SMc00322 0.83 +0.2 276,160 - SMc00322 0.83 +0.5 276,170 + SMc00322 0.84 +1.2 276,399 - -0.4 277,039 + -1.6 277,039 + -0.8
Or see this region's nucleotide sequence