Strain Fitness in Sinorhizobium meliloti 1021 around SMa2012

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,138,235	+				+0.5
1,138,236	-				+0.1
1,138,275	-		SMa2009	0.16	-0.1
1,138,532	+		SMa2009	0.73	-0.5
1,138,532	+		SMa2009	0.73	-0.0
1,138,765	+		SMa2011	0.35	+0.3
1,138,765	+		SMa2011	0.35	+1.3
1,138,766	-		SMa2011	0.35	+0.2
1,138,848	+		SMa2011	0.60	-0.0
1,139,198	+				+0.4
1,139,218	+		SMa2012	0.10	+0.4
1,139,219	-		SMa2012	0.10	+0.2
1,139,251	+		SMa2012	0.12	-0.0
1,139,291	+		SMa2012	0.15	+0.5
1,139,291	+		SMa2012	0.15	+0.2
1,139,292	-		SMa2012	0.15	+1.3
1,139,358	-		SMa2012	0.19	-0.2
1,139,383	+		SMa2012	0.20	+0.1
1,139,383	+		SMa2012	0.20	-1.5
1,139,384	-		SMa2012	0.20	+0.5
1,139,384	-		SMa2012	0.20	+1.3
1,139,409	+		SMa2012	0.22	+0.3
1,139,538	-		SMa2012	0.29	+0.9
1,139,538	-		SMa2012	0.29	-0.3
1,139,538	-		SMa2012	0.29	+0.6
1,139,540	-		SMa2012	0.29	+0.2
1,139,580	+		SMa2012	0.32	-0.6
1,139,580	+		SMa2012	0.32	+0.7
1,139,581	-		SMa2012	0.32	-0.4
1,139,583	+		SMa2012	0.32	+0.6
1,139,583	+		SMa2012	0.32	+0.1
1,139,583	+		SMa2012	0.32	+0.5
1,139,583	+		SMa2012	0.32	+0.1
1,139,602	+		SMa2012	0.33	+0.5
1,139,602	+		SMa2012	0.33	-0.4
1,139,603	-		SMa2012	0.33	+1.3
1,139,603	-		SMa2012	0.33	-0.4
1,139,748	+		SMa2012	0.42	-0.1
1,139,749	-		SMa2012	0.42	-0.2
1,139,816	+		SMa2012	0.46	-1.1
1,139,821	-		SMa2012	0.46	+0.8
1,139,834	-		SMa2012	0.47	-0.2
1,139,843	-		SMa2012	0.47	-0.4
1,139,873	+		SMa2012	0.49	-0.5
1,139,874	-		SMa2012	0.49	-2.0
1,139,874	-		SMa2012	0.49	+0.3
1,139,874	-		SMa2012	0.49	-0.0
1,139,874	-		SMa2012	0.49	+0.5
1,139,975	+		SMa2012	0.55	-0.8
1,139,976	-		SMa2012	0.55	-1.0
1,139,976	-		SMa2012	0.55	-1.2
1,139,976	-		SMa2012	0.55	+0.5
1,140,015	-		SMa2012	0.58	-0.4
1,140,015	-		SMa2012	0.58	-0.1
1,140,080	-		SMa2012	0.62	+0.3
1,140,080	-		SMa2012	0.62	+0.1
1,140,167	-		SMa2012	0.67	+0.1
1,140,292	+		SMa2012	0.74	-0.5
1,140,293	-		SMa2012	0.74	-1.4
1,140,350	+		SMa2012	0.78	-1.0
1,140,350	+		SMa2012	0.78	-0.1
1,140,428	+		SMa2012	0.82	+0.5
1,140,431	-		SMa2012	0.82	-0.0
1,140,460	+		SMa2012	0.84	-0.7
1,140,461	-		SMa2012	0.84	+0.5
1,140,461	-		SMa2012	0.84	-0.3
1,140,618	-				+1.3
1,140,793	+				+1.4
1,140,799	-				-1.0
1,140,799	-				-0.3
1,140,894	+				-0.3
1,140,959	-				+0.8
1,140,963	+				+0.3
1,140,993	-				-0.9
1,141,038	+				+1.0
1,141,039	-				-0.5
1,141,116	-				-1.2
1,141,190	+				-0.3
1,141,191	-				-1.0
1,141,191	-				-0.1
1,141,257	-				-1.0
1,141,274	+				+0.4
1,141,275	-				+0.1
1,141,411	+				+1.0
1,141,411	+				+1.4
1,141,412	-				+0.5
1,141,412	-				+0.2
1,141,412	-				+0.2
1,141,412	-				+0.6
1,141,415	+				-0.8
1,141,416	-				+0.3
1,141,432	+				-1.2
1,141,453	+				+0.3
1,141,453	+				+0.3
1,141,454	-				+0.1
1,141,454	-				+1.3
1,141,454	-				+1.8
1,141,456	+				-0.0
1,141,456	+				-0.7
1,141,456	+				-0.9
1,141,457	-				+0.3
1,141,587	-		SMa2014	0.19	+0.3
1,141,587	-		SMa2014	0.19	-0.7
1,141,632	+		SMa2014	0.29	-1.3
1,141,633	-		SMa2014	0.29	-0.4
1,141,685	+		SMa2014	0.41	-0.9
1,141,686	-		SMa2014	0.42	-0.1
1,141,686	-		SMa2014	0.42	+2.6
1,141,690	+		SMa2014	0.42	+1.7