Strain Fitness in Sinorhizobium meliloti 1021 around SMa1959

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,112,555	+		SMa1957	0.27	+0.2
1,112,725	+		SMa1957	0.46	-0.4
1,112,725	+		SMa1957	0.46	-0.7
1,112,725	+		SMa1957	0.46	+0.2
1,112,726	-		SMa1957	0.46	-0.1
1,112,769	+		SMa1957	0.51	-0.8
1,112,769	+		SMa1957	0.51	+0.1
1,112,770	-		SMa1957	0.51	-0.3
1,112,770	-		SMa1957	0.51	+0.0
1,112,853	+		SMa1957	0.60	-0.1
1,112,854	-		SMa1957	0.60	-0.6
1,113,074	+		SMa1957	0.85	+0.0
1,113,075	-		SMa1957	0.85	-1.7
1,113,075	-		SMa1957	0.85	-0.9
1,113,075	-		SMa1957	0.85	-1.6
1,113,191	-				+0.4
1,113,191	-				+0.1
1,113,191	-				+0.5
1,113,226	-				-1.7
1,113,295	+				+0.5
1,113,331	+				-0.7
1,113,332	-				+0.3
1,113,332	-				-1.3
1,113,337	-				+1.1
1,113,337	-				+0.4
1,113,375	+				+0.6
1,113,462	+				-0.5
1,113,462	+				+0.7
1,113,463	-				+1.5
1,113,464	+				-0.9
1,113,465	-				+0.0
1,113,466	+				+0.9
1,113,467	-				+0.9
1,113,467	-				-0.3
1,113,467	-				-0.2
1,113,467	-				-0.1
1,113,467	-				-0.6
1,113,503	+				-1.5
1,113,511	-				-1.3
1,113,511	-				+0.0
1,113,588	+				+0.7
1,113,588	+				-0.2
1,113,589	-				-0.8
1,113,613	+				+0.7
1,113,613	+				-0.6
1,113,613	+				-1.1
1,113,614	-				+0.1
1,113,614	-				-0.2
1,113,614	-				-0.8
1,113,630	-				-0.2
1,113,658	+		SMa1959	0.12	+1.2
1,113,659	-		SMa1959	0.12	-0.1
1,113,663	+		SMa1959	0.12	+3.6
1,113,664	-		SMa1959	0.12	+0.1
1,113,668	+		SMa1959	0.13	+0.0
1,113,670	+		SMa1959	0.13	+0.2
1,113,671	-		SMa1959	0.13	+1.2
1,113,713	-		SMa1959	0.16	-0.4
1,113,964	+		SMa1959	0.36	-1.7
1,113,964	+		SMa1959	0.36	+0.7
1,114,195	+		SMa1959	0.55	-0.1
1,114,350	-		SMa1959	0.68	+0.2
1,114,440	+		SMa1959	0.75	-1.7
1,114,613	-		SMa1959	0.89	+3.0
1,114,660	-				-0.7
1,114,671	+				+1.7
1,114,703	+				-0.5
1,114,743	+				-0.5
1,114,874	+				+0.8
1,115,084	+		SMa1960	0.53	+0.4
1,115,084	+		SMa1960	0.53	+0.9
1,115,084	+		SMa1960	0.53	+0.8
1,115,085	-		SMa1960	0.53	-0.2
1,115,214	+		SMa1960	0.81	-2.1
1,115,215	-		SMa1960	0.81	+0.7
1,115,270	-				-1.0
1,115,292	+				+1.0
1,115,311	-				-0.1
1,115,374	+				+0.8
1,115,374	+				-0.4
1,115,474	-				+0.3
1,115,474	-				-1.0
1,115,515	-		SMa1961	0.14	-0.0
1,115,568	+		SMa1961	0.19	+0.3
1,115,569	-		SMa1961	0.19	+1.1
1,115,569	-		SMa1961	0.19	+1.7
1,115,570	+		SMa1961	0.19	-0.1
1,115,570	+		SMa1961	0.19	-0.3
1,115,570	+		SMa1961	0.19	+0.5
1,115,570	+		SMa1961	0.19	-0.2
1,115,570	+		SMa1961	0.19	+0.2
1,115,571	-		SMa1961	0.19	+0.1
1,115,571	-		SMa1961	0.19	+2.2
1,115,571	-		SMa1961	0.19	+3.1
1,115,571	-		SMa1961	0.19	-0.2
1,115,626	-		SMa1961	0.24	+0.1