Strain Fitness in Sinorhizobium meliloti 1021 around SMa0917
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
508,895 | - | -0.1 | |||
509,310 | + | SMa0914 | 0.53 | -0.2 | |
509,310 | + | SMa0914 | 0.53 | +0.7 | |
509,481 | + | SMa0914 | 0.72 | -1.8 | |
509,481 | + | SMa0914 | 0.72 | -0.2 | |
509,746 | + | -0.0 | |||
509,747 | - | -0.8 | |||
509,822 | + | -1.3 | |||
509,823 | - | -0.9 | |||
509,829 | - | -0.5 | |||
509,833 | - | -1.1 | |||
509,899 | + | -1.1 | |||
509,900 | - | -0.7 | |||
509,990 | + | SMa0917 | 0.32 | +0.3 | |
509,996 | + | SMa0917 | 0.34 | -0.4 | |
509,997 | - | SMa0917 | 0.34 | -0.5 | |
509,997 | - | SMa0917 | 0.34 | -0.9 | |
509,997 | - | SMa0917 | 0.34 | -0.9 | |
510,143 | - | SMa0917 | 0.79 | -0.2 | |
510,227 | + | -0.8 | |||
510,233 | + | +0.2 | |||
510,234 | - | -1.8 | |||
510,257 | + | +0.7 | |||
510,258 | - | -1.2 | |||
510,284 | - | -1.0 | |||
510,305 | + | -0.2 | |||
510,305 | + | -0.6 | |||
510,609 | + | +0.2 | |||
510,609 | + | -1.0 | |||
510,610 | - | -0.4 | |||
510,610 | - | +0.1 | |||
510,912 | + | SMa5006 | 0.37 | -0.8 | |
510,914 | + | SMa5006 | 0.38 | -0.7 | |
510,914 | + | SMa5006 | 0.38 | -1.1 | |
510,914 | + | SMa5006 | 0.38 | -0.1 | |
510,914 | + | SMa5006 | 0.38 | +0.2 | |
510,914 | + | SMa5006 | 0.38 | -0.4 | |
510,914 | + | SMa5006 | 0.38 | -0.5 | |
510,915 | - | SMa5006 | 0.38 | -0.1 | |
510,915 | - | SMa5006 | 0.38 | -2.8 | |
510,964 | - | SMa5006 | 0.52 | +0.8 | |
510,966 | + | SMa5006 | 0.52 | -0.5 | |
510,966 | + | SMa5006 | 0.52 | +0.5 | |
510,967 | - | SMa5006 | 0.53 | +0.2 | |
510,990 | + | SMa5006 | 0.59 | +1.8 | |
510,991 | - | SMa5006 | 0.59 | +0.1 | |
511,007 | - | SMa5006 | 0.64 | -0.1 | |
511,093 | + | SMa5006 | 0.88 | +0.2 |
Or see this region's nucleotide sequence