Strain Fitness in Sinorhizobium meliloti 1021 around SMa0905
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
503,458 | + | SMa0903 | 0.24 | +0.9 | |
503,473 | - | SMa0903 | 0.26 | -0.4 | |
503,763 | + | SMa0903 | 0.50 | +0.3 | |
503,776 | - | SMa0903 | 0.51 | +0.1 | |
503,776 | - | SMa0903 | 0.51 | -0.8 | |
503,788 | + | SMa0903 | 0.52 | -1.5 | |
503,813 | + | SMa0903 | 0.54 | -0.6 | |
503,813 | + | SMa0903 | 0.54 | -0.1 | |
503,814 | - | SMa0903 | 0.54 | +0.1 | |
503,814 | - | SMa0903 | 0.54 | -0.0 | |
503,879 | - | SMa0903 | 0.60 | -0.5 | |
503,894 | - | SMa0903 | 0.61 | -0.8 | |
503,894 | - | SMa0903 | 0.61 | +0.1 | |
503,894 | - | SMa0903 | 0.61 | -0.4 | |
503,944 | + | SMa0903 | 0.65 | -0.4 | |
503,971 | - | SMa0903 | 0.68 | +0.5 | |
504,369 | + | +0.0 | |||
504,369 | + | -1.4 | |||
504,369 | + | -1.1 | |||
504,370 | - | +0.7 | |||
504,534 | - | SMa0905 | 0.22 | -0.8 | |
504,896 | + | +0.1 | |||
504,896 | + | -0.7 | |||
504,975 | - | +0.5 | |||
505,045 | + | +0.2 | |||
505,046 | - | +0.1 | |||
505,051 | - | +0.5 | |||
505,070 | + | +0.0 | |||
505,071 | - | +0.2 | |||
505,071 | - | +0.1 | |||
505,385 | + | SMa0907 | 0.33 | -0.1 | |
505,447 | + | SMa0907 | 0.38 | -0.0 | |
505,489 | + | SMa0907 | 0.41 | -0.1 | |
505,542 | + | SMa0907 | 0.46 | -0.2 | |
505,542 | + | SMa0907 | 0.46 | -0.2 | |
505,768 | + | SMa0907 | 0.64 | -0.9 |
Or see this region's nucleotide sequence