Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21191 and SM_b21192 are separated by 225 nucleotides SM_b21192 and SM_b21196 are separated by 644 nucleotides
SM_b21191: SM_b21191 - surface saccharide ABC transporter ATP-binding/membrane spanning protein, at 941,311 to 943,104
_b21191
SM_b21192: SM_b21192 - fructose-1,6-bisphosphate aldolase, at 943,330 to 944,373
_b21192
SM_b21196: SM_b21196 - oligopeptide uptake ABC transporter substrate-binding protein precursor, at 945,018 to 946,616
_b21196
Position (kb) 943
944
945 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 942.670 kb on + strand, within SM_b21191 at 942.671 kb on - strand, within SM_b21191 at 942.758 kb on - strand, within SM_b21191 at 943.069 kb on + strand at 943.497 kb on + strand, within SM_b21192 at 943.548 kb on + strand, within SM_b21192 at 943.632 kb on - strand, within SM_b21192 at 943.772 kb on + strand, within SM_b21192 at 943.773 kb on - strand, within SM_b21192 at 943.773 kb on - strand, within SM_b21192 at 944.013 kb on + strand, within SM_b21192 at 944.013 kb on + strand, within SM_b21192 at 944.014 kb on - strand, within SM_b21192 at 944.015 kb on + strand, within SM_b21192 at 944.015 kb on + strand, within SM_b21192 at 944.015 kb on + strand, within SM_b21192 at 944.015 kb on + strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.016 kb on - strand, within SM_b21192 at 944.156 kb on + strand, within SM_b21192 at 944.156 kb on + strand, within SM_b21192 at 944.157 kb on - strand, within SM_b21192 at 944.283 kb on + strand at 944.284 kb on - strand at 944.285 kb on + strand at 944.322 kb on - strand at 944.377 kb on + strand at 944.378 kb on - strand at 944.426 kb on + strand at 944.426 kb on + strand at 944.427 kb on - strand at 944.427 kb on - strand at 944.427 kb on - strand at 944.427 kb on - strand at 944.517 kb on - strand at 944.796 kb on + strand at 945.103 kb on + strand at 945.103 kb on + strand at 945.192 kb on + strand, within SM_b21196 at 945.193 kb on - strand, within SM_b21196 at 945.210 kb on + strand, within SM_b21196 at 945.210 kb on + strand, within SM_b21196 at 945.210 kb on + strand, within SM_b21196 at 945.210 kb on + strand, within SM_b21196 at 945.212 kb on - strand, within SM_b21196 at 945.279 kb on + strand, within SM_b21196 at 945.280 kb on - strand, within SM_b21196
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 942,670 + SM_b21191 0.76 -0.7 942,671 - SM_b21191 0.76 -0.9 942,758 - SM_b21191 0.81 -0.8 943,069 + -1.3 943,497 + SM_b21192 0.16 +1.6 943,548 + SM_b21192 0.21 +1.8 943,632 - SM_b21192 0.29 +1.8 943,772 + SM_b21192 0.42 +1.1 943,773 - SM_b21192 0.42 +0.8 943,773 - SM_b21192 0.42 +1.7 944,013 + SM_b21192 0.65 +2.2 944,013 + SM_b21192 0.65 +2.0 944,014 - SM_b21192 0.66 +1.6 944,015 + SM_b21192 0.66 +0.9 944,015 + SM_b21192 0.66 +1.3 944,015 + SM_b21192 0.66 +2.3 944,015 + SM_b21192 0.66 +1.6 944,016 - SM_b21192 0.66 +1.1 944,016 - SM_b21192 0.66 +1.4 944,016 - SM_b21192 0.66 +1.5 944,016 - SM_b21192 0.66 +1.7 944,016 - SM_b21192 0.66 +1.5 944,016 - SM_b21192 0.66 +1.3 944,156 + SM_b21192 0.79 +1.9 944,156 + SM_b21192 0.79 +1.1 944,157 - SM_b21192 0.79 +1.8 944,283 + +3.3 944,284 - +1.2 944,285 + +1.3 944,322 - +1.5 944,377 + +1.1 944,378 - +1.6 944,426 + +0.3 944,426 + +1.4 944,427 - -0.3 944,427 - +2.7 944,427 - +1.7 944,427 - +1.3 944,517 - +1.2 944,796 + -1.8 945,103 + +0.5 945,103 + -0.5 945,192 + SM_b21196 0.11 -0.1 945,193 - SM_b21196 0.11 +0.5 945,210 + SM_b21196 0.12 +0.2 945,210 + SM_b21196 0.12 -0.3 945,210 + SM_b21196 0.12 +0.2 945,210 + SM_b21196 0.12 +0.5 945,212 - SM_b21196 0.12 +0.3 945,279 + SM_b21196 0.16 +0.1 945,280 - SM_b21196 0.16 -0.2
Or see this region's nucleotide sequence