Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20349 and SM_b20350 are separated by 165 nucleotides SM_b20350 and SM_b20351 overlap by 4 nucleotides
SM_b20349: SM_b20349 - sugar ABC transporter, at 356,464 to 357,405
_b20349
SM_b20350: SM_b20350 - hypothetical protein, at 357,571 to 358,215
_b20350
SM_b20351: SM_b20351 - sugar ABC transporter ATP-binding protein, at 358,212 to 359,762
_b20351
Position (kb) 357
358
359 Strain fitness (log2 ratio) -2
-1
0
1 at 356.861 kb on - strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.920 kb on + strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 356.921 kb on - strand, within SM_b20349 at 357.055 kb on + strand, within SM_b20349 at 357.073 kb on - strand, within SM_b20349 at 357.106 kb on - strand, within SM_b20349 at 357.259 kb on + strand, within SM_b20349 at 357.260 kb on - strand, within SM_b20349 at 357.298 kb on + strand, within SM_b20349 at 357.299 kb on - strand, within SM_b20349 at 357.739 kb on + strand, within SM_b20350 at 357.817 kb on + strand, within SM_b20350 at 357.885 kb on + strand, within SM_b20350 at 357.886 kb on - strand, within SM_b20350 at 357.914 kb on - strand, within SM_b20350 at 358.275 kb on + strand at 358.284 kb on - strand at 358.285 kb on + strand at 358.286 kb on - strand at 358.725 kb on - strand, within SM_b20351 at 358.821 kb on + strand, within SM_b20351 at 358.822 kb on - strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.863 kb on + strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.864 kb on - strand, within SM_b20351 at 358.922 kb on + strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.078 kb on - strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.103 kb on + strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351 at 359.104 kb on - strand, within SM_b20351
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 356,861 - SM_b20349 0.42 -0.4 356,920 + SM_b20349 0.48 +0.6 356,920 + SM_b20349 0.48 +0.6 356,920 + SM_b20349 0.48 -0.1 356,921 - SM_b20349 0.49 +0.2 356,921 - SM_b20349 0.49 +0.3 356,921 - SM_b20349 0.49 +0.8 357,055 + SM_b20349 0.63 -1.8 357,073 - SM_b20349 0.65 -0.3 357,106 - SM_b20349 0.68 -0.8 357,259 + SM_b20349 0.84 -2.2 357,260 - SM_b20349 0.85 +0.6 357,298 + SM_b20349 0.89 +0.0 357,299 - SM_b20349 0.89 +0.4 357,739 + SM_b20350 0.26 -0.3 357,817 + SM_b20350 0.38 +0.2 357,885 + SM_b20350 0.49 -1.9 357,886 - SM_b20350 0.49 -1.4 357,914 - SM_b20350 0.53 -0.6 358,275 + +0.8 358,284 - +0.1 358,285 + -0.2 358,286 - +0.5 358,725 - SM_b20351 0.33 -0.1 358,821 + SM_b20351 0.39 +0.0 358,822 - SM_b20351 0.39 -0.3 358,863 + SM_b20351 0.42 -0.2 358,863 + SM_b20351 0.42 +0.4 358,864 - SM_b20351 0.42 -0.2 358,864 - SM_b20351 0.42 -0.3 358,864 - SM_b20351 0.42 +0.8 358,922 + SM_b20351 0.46 +0.4 359,078 - SM_b20351 0.56 -0.4 359,078 - SM_b20351 0.56 +1.1 359,103 + SM_b20351 0.57 -0.6 359,103 + SM_b20351 0.57 +0.4 359,104 - SM_b20351 0.58 -0.8 359,104 - SM_b20351 0.58 -0.7
Or see this region's nucleotide sequence