Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20326 and SM_b20327 overlap by 1 nucleotides SM_b20327 and SM_b20328 are separated by 9 nucleotides
SM_b20326: SM_b20326 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) <small>(from data)</small>, at 329,457 to 330,443
_b20326
SM_b20327: SM_b20327 - ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) <small>(from data)</small>, at 330,443 to 331,273
_b20327
SM_b20328: SM_b20328 - ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) <small>(from data)</small>, at 331,283 to 332,311
_b20328
Position (kb) 330
331
332 Strain fitness (log2 ratio) -2
-1
0
1 at 329.446 kb on - strand at 329.619 kb on + strand, within SM_b20326 at 329.619 kb on + strand, within SM_b20326 at 329.619 kb on + strand, within SM_b20326 at 329.619 kb on + strand, within SM_b20326 at 329.686 kb on - strand, within SM_b20326 at 329.777 kb on + strand, within SM_b20326 at 329.777 kb on + strand, within SM_b20326 at 330.123 kb on + strand, within SM_b20326 at 330.123 kb on + strand, within SM_b20326 at 330.258 kb on + strand, within SM_b20326 at 330.259 kb on - strand, within SM_b20326 at 330.399 kb on + strand at 330.400 kb on - strand at 330.400 kb on - strand at 330.400 kb on - strand at 330.400 kb on - strand at 330.477 kb on - strand at 330.522 kb on - strand at 330.522 kb on - strand at 330.525 kb on - strand at 330.575 kb on + strand, within SM_b20327 at 330.590 kb on - strand, within SM_b20327 at 330.605 kb on + strand, within SM_b20327 at 330.605 kb on + strand, within SM_b20327 at 330.606 kb on - strand, within SM_b20327 at 330.606 kb on - strand, within SM_b20327 at 330.685 kb on - strand, within SM_b20327 at 330.714 kb on - strand, within SM_b20327 at 330.729 kb on + strand, within SM_b20327 at 330.729 kb on + strand, within SM_b20327 at 330.730 kb on - strand, within SM_b20327 at 330.869 kb on + strand, within SM_b20327 at 331.272 kb on - strand at 331.549 kb on + strand, within SM_b20328 at 331.559 kb on + strand, within SM_b20328 at 331.662 kb on + strand, within SM_b20328 at 331.850 kb on + strand, within SM_b20328 at 331.850 kb on + strand, within SM_b20328 at 331.851 kb on - strand, within SM_b20328 at 331.897 kb on - strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.033 kb on + strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.034 kb on - strand, within SM_b20328 at 332.141 kb on + strand, within SM_b20328 at 332.141 kb on + strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.142 kb on - strand, within SM_b20328 at 332.143 kb on + strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.144 kb on - strand, within SM_b20328 at 332.147 kb on + strand, within SM_b20328 at 332.148 kb on - strand, within SM_b20328
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 329,446 - -2.2 329,619 + SM_b20326 0.16 +0.4 329,619 + SM_b20326 0.16 -0.5 329,619 + SM_b20326 0.16 -0.2 329,619 + SM_b20326 0.16 +0.9 329,686 - SM_b20326 0.23 -0.2 329,777 + SM_b20326 0.32 -0.9 329,777 + SM_b20326 0.32 -0.9 330,123 + SM_b20326 0.67 +0.1 330,123 + SM_b20326 0.67 +0.8 330,258 + SM_b20326 0.81 +0.3 330,259 - SM_b20326 0.81 -0.1 330,399 + +0.2 330,400 - +0.2 330,400 - -0.7 330,400 - +0.9 330,400 - +0.7 330,477 - +0.5 330,522 - -0.0 330,522 - -0.6 330,525 - -0.4 330,575 + SM_b20327 0.16 -0.8 330,590 - SM_b20327 0.18 +0.5 330,605 + SM_b20327 0.19 -0.6 330,605 + SM_b20327 0.19 -2.0 330,606 - SM_b20327 0.20 -0.1 330,606 - SM_b20327 0.20 +0.1 330,685 - SM_b20327 0.29 -0.2 330,714 - SM_b20327 0.33 +0.5 330,729 + SM_b20327 0.34 +0.1 330,729 + SM_b20327 0.34 -0.1 330,730 - SM_b20327 0.35 +0.3 330,869 + SM_b20327 0.51 -0.5 331,272 - +0.1 331,549 + SM_b20328 0.26 -1.2 331,559 + SM_b20328 0.27 -0.7 331,662 + SM_b20328 0.37 -0.3 331,850 + SM_b20328 0.55 -0.7 331,850 + SM_b20328 0.55 +0.6 331,851 - SM_b20328 0.55 -1.0 331,897 - SM_b20328 0.60 -0.1 332,033 + SM_b20328 0.73 +1.1 332,033 + SM_b20328 0.73 -0.0 332,033 + SM_b20328 0.73 -0.5 332,033 + SM_b20328 0.73 -0.5 332,033 + SM_b20328 0.73 -0.8 332,033 + SM_b20328 0.73 +0.7 332,034 - SM_b20328 0.73 +0.0 332,034 - SM_b20328 0.73 +0.5 332,034 - SM_b20328 0.73 -0.1 332,141 + SM_b20328 0.83 +0.1 332,141 + SM_b20328 0.83 -1.7 332,142 - SM_b20328 0.83 -1.6 332,142 - SM_b20328 0.83 -1.5 332,142 - SM_b20328 0.83 +0.8 332,142 - SM_b20328 0.83 +0.7 332,143 + SM_b20328 0.84 +0.3 332,144 - SM_b20328 0.84 -0.1 332,144 - SM_b20328 0.84 -0.3 332,144 - SM_b20328 0.84 +1.0 332,144 - SM_b20328 0.84 +0.4 332,144 - SM_b20328 0.84 +0.8 332,147 + SM_b20328 0.84 -0.2 332,148 - SM_b20328 0.84 -1.2
Or see this region's nucleotide sequence