Strain Fitness in Sinorhizobium meliloti 1021 around SMc04454

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,373,485	-		SMc01842	0.64	+1.1
2,373,649	+		SMc01842	0.80	+0.7
2,373,728	+		SMc01842	0.88	+0.4
2,373,851	+				-0.5
2,373,878	-				-0.3
2,373,976	+				+0.3
2,373,977	-				-0.0
2,374,038	+				-0.5
2,374,205	+				+1.6
2,374,234	+				+0.3
2,374,234	+				+0.6
2,374,234	+				+0.6
2,374,235	-				-0.1
2,374,261	+				+0.8
2,374,261	+				+0.3
2,374,262	-				+1.2
2,374,262	-				-0.2
2,374,424	+		SMc04454	0.11	+2.8
2,374,424	+		SMc04454	0.11	+3.5
2,374,630	+		SMc04454	0.24	+3.1
2,374,631	-		SMc04454	0.24	+3.6
2,375,179	+		SMc04454	0.57	+0.9
2,375,179	+		SMc04454	0.57	+3.3
2,375,180	-		SMc04454	0.57	+2.7
2,375,191	+		SMc04454	0.58	+2.3
2,375,192	-		SMc04454	0.58	+2.6
2,375,192	-		SMc04454	0.58	+2.9
2,375,579	+		SMc04454	0.81	+2.9
2,375,580	-		SMc04454	0.81	+2.9
2,375,581	+		SMc04454	0.81	+3.4
2,375,582	-		SMc04454	0.81	+4.0
2,375,582	-		SMc04454	0.81	+3.1
2,375,717	-		SMc04454	0.89	+3.2
2,375,717	-		SMc04454	0.89	+3.4
2,375,760	-				+3.4
2,375,803	+				+3.7
2,375,873	-				+2.2
2,375,873	-				+2.2
2,375,873	-				+3.1
2,375,873	-				+3.1
2,375,929	+				+2.0
2,375,929	+				+0.9
2,375,930	-				-0.9
2,375,930	-				-2.4
2,375,930	-				-0.0
2,376,285	+		SMc02819	0.35	+0.0
2,376,285	+		SMc02819	0.35	-0.1
2,376,285	+		SMc02819	0.35	-0.3
2,376,286	-		SMc02819	0.35	-0.4
2,376,334	+		SMc02819	0.41	-0.9
2,376,335	-		SMc02819	0.41	-0.5
2,376,335	-		SMc02819	0.41	-0.7
2,376,362	+		SMc02819	0.45	+0.0
2,376,363	-		SMc02819	0.45	+0.1
2,376,520	+		SMc02819	0.65	+0.3
2,376,521	-		SMc02819	0.65	-0.7
2,376,521	-		SMc02819	0.65	-0.7
2,376,521	-		SMc02819	0.65	+0.1
2,376,540	+		SMc02819	0.68	+0.5
2,376,541	-		SMc02819	0.68	-0.6
2,376,541	-		SMc02819	0.68	+0.3
2,376,656	-		SMc02819	0.83	-0.4
2,376,801	-				+0.8
2,376,801	-				-0.1
2,376,834	-				-0.8
2,376,834	-				+0.1