Strain Fitness in Sinorhizobium meliloti 1021 around SMc04090
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,631,665 | - | -0.6 | |||
3,631,665 | - | +0.6 | |||
3,631,665 | - | +0.6 | |||
3,631,673 | - | +0.1 | |||
3,631,694 | - | -0.0 | |||
3,631,783 | + | +0.1 | |||
3,632,015 | + | SMc04090 | 0.19 | -0.1 | |
3,632,547 | + | SMc04090 | 0.56 | -1.0 | |
3,632,590 | + | SMc04090 | 0.59 | -0.6 | |
3,632,882 | + | SMc04090 | 0.80 | -1.1 | |
3,632,957 | - | SMc04090 | 0.85 | -1.3 | |
3,633,150 | - | -0.1 | |||
3,633,247 | + | +0.6 | |||
3,633,388 | + | SMc04091 | 0.23 | +1.2 | |
3,633,388 | + | SMc04091 | 0.23 | -0.1 | |
3,633,388 | + | SMc04091 | 0.23 | -0.3 | |
3,633,389 | - | SMc04091 | 0.23 | -1.1 | |
3,633,492 | - | SMc04091 | 0.34 | -0.6 | |
3,633,492 | - | SMc04091 | 0.34 | +0.8 | |
3,633,520 | - | SMc04091 | 0.37 | -0.1 | |
3,633,529 | + | SMc04091 | 0.38 | -0.4 | |
3,633,529 | + | SMc04091 | 0.38 | -0.3 | |
3,633,530 | - | SMc04091 | 0.38 | -1.2 | |
3,633,549 | - | SMc04091 | 0.40 | -0.2 | |
3,633,762 | + | SMc04091 | 0.62 | -0.9 | |
3,633,916 | - | SMc04091 | 0.78 | +0.0 | |
3,633,919 | - | SMc04091 | 0.79 | -1.9 | |
3,634,059 | + | -0.6 | |||
3,634,060 | - | -0.1 | |||
3,634,060 | - | -1.6 |
Or see this region's nucleotide sequence