Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03068 and SMc03069 are separated by 91 nucleotides SMc03069 and SMc03070 are separated by 8 nucleotides
SMc03068: SMc03068 - phosphogluconate dehydratase, at 766,634 to 768,454
SMc03068
SMc03069: SMc03069 - 6-phosphogluconolactonase, at 768,546 to 769,244
SMc03069
SMc03070: SMc03070 - glucose-6-phosphate 1-dehydrogenase, at 769,253 to 770,728
SMc03070
Position (kb) 768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8 at 767.778 kb on + strand, within SMc03068 at 767.785 kb on + strand, within SMc03068 at 767.785 kb on + strand, within SMc03068 at 767.786 kb on - strand, within SMc03068 at 767.805 kb on + strand, within SMc03068 at 767.806 kb on - strand, within SMc03068 at 768.189 kb on + strand, within SMc03068 at 768.189 kb on + strand, within SMc03068 at 768.228 kb on + strand, within SMc03068 at 768.228 kb on + strand, within SMc03068 at 768.229 kb on - strand, within SMc03068 at 768.229 kb on - strand, within SMc03068 at 768.382 kb on - strand at 768.424 kb on + strand at 768.435 kb on - strand at 768.478 kb on + strand at 768.559 kb on + strand at 768.559 kb on + strand at 768.560 kb on - strand at 768.560 kb on - strand at 768.560 kb on - strand at 768.560 kb on - strand at 768.561 kb on + strand at 768.561 kb on + strand at 768.561 kb on + strand at 768.562 kb on - strand at 768.685 kb on + strand, within SMc03069 at 768.827 kb on + strand, within SMc03069 at 768.827 kb on + strand, within SMc03069 at 769.254 kb on + strand at 769.254 kb on + strand at 769.330 kb on + strand at 769.331 kb on - strand at 769.467 kb on + strand, within SMc03070 at 769.722 kb on + strand, within SMc03070 at 769.722 kb on + strand, within SMc03070 at 769.818 kb on + strand, within SMc03070 at 770.002 kb on + strand, within SMc03070 at 770.046 kb on + strand, within SMc03070 at 770.130 kb on + strand, within SMc03070 at 770.131 kb on - strand, within SMc03070 at 770.188 kb on - strand, within SMc03070
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 767,778 + SMc03068 0.63 -0.5 767,785 + SMc03068 0.63 -0.8 767,785 + SMc03068 0.63 -1.4 767,786 - SMc03068 0.63 -2.5 767,805 + SMc03068 0.64 +0.1 767,806 - SMc03068 0.64 -0.2 768,189 + SMc03068 0.85 +0.2 768,189 + SMc03068 0.85 +0.1 768,228 + SMc03068 0.88 +0.7 768,228 + SMc03068 0.88 -0.2 768,229 - SMc03068 0.88 -0.7 768,229 - SMc03068 0.88 -1.9 768,382 - +0.3 768,424 + -1.3 768,435 - -0.7 768,478 + -0.3 768,559 + +7.1 768,559 + +6.8 768,560 - +7.7 768,560 - +8.3 768,560 - +7.3 768,560 - +7.3 768,561 + +7.2 768,561 + +7.3 768,561 + +7.3 768,562 - +7.3 768,685 + SMc03069 0.20 +6.5 768,827 + SMc03069 0.40 +7.7 768,827 + SMc03069 0.40 +7.5 769,254 + +6.9 769,254 + +7.3 769,330 + +0.8 769,331 - +0.9 769,467 + SMc03070 0.14 -0.1 769,722 + SMc03070 0.32 +0.1 769,722 + SMc03070 0.32 -0.9 769,818 + SMc03070 0.38 -0.9 770,002 + SMc03070 0.51 +2.1 770,046 + SMc03070 0.54 +0.4 770,130 + SMc03070 0.59 +0.4 770,131 - SMc03070 0.59 +1.0 770,188 - SMc03070 0.63 +0.7
Or see this region's nucleotide sequence