Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02861 and SMc02862 overlap by 1 nucleotides SMc02862 and SMc02863 are separated by 234 nucleotides
SMc02861: SMc02861 - phosphate transporter, at 214,914 to 215,918
SMc02861
SMc02862: SMc02862 - Pit accessory protein, at 215,918 to 216,562
SMc02862
SMc02863: SMc02863 - recombination protein F, at 216,797 to 217,921
SMc02863
Position (kb) 215
216
217 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 214.940 kb on - strand at 215.270 kb on - strand, within SMc02861 at 215.363 kb on - strand, within SMc02861 at 215.783 kb on - strand, within SMc02861 at 215.783 kb on - strand, within SMc02861 at 215.997 kb on + strand, within SMc02862 at 216.017 kb on - strand, within SMc02862 at 216.018 kb on + strand, within SMc02862 at 216.018 kb on + strand, within SMc02862 at 216.018 kb on + strand, within SMc02862 at 216.019 kb on - strand, within SMc02862 at 216.019 kb on - strand, within SMc02862 at 216.019 kb on - strand, within SMc02862 at 216.019 kb on - strand, within SMc02862 at 216.019 kb on - strand, within SMc02862 at 216.765 kb on + strand at 216.766 kb on - strand at 216.766 kb on - strand at 216.848 kb on + strand at 216.848 kb on + strand at 216.848 kb on + strand at 216.848 kb on + strand at 216.848 kb on + strand at 216.849 kb on - strand at 216.849 kb on - strand at 216.849 kb on - strand at 216.849 kb on - strand at 217.157 kb on - strand, within SMc02863 at 217.536 kb on - strand, within SMc02863
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 214,940 - -0.1 215,270 - SMc02861 0.35 -1.1 215,363 - SMc02861 0.45 -0.0 215,783 - SMc02861 0.86 -0.6 215,783 - SMc02861 0.86 -1.9 215,997 + SMc02862 0.12 -0.3 216,017 - SMc02862 0.15 -0.5 216,018 + SMc02862 0.16 -1.2 216,018 + SMc02862 0.16 -2.0 216,018 + SMc02862 0.16 -3.8 216,019 - SMc02862 0.16 -0.4 216,019 - SMc02862 0.16 -0.7 216,019 - SMc02862 0.16 -0.7 216,019 - SMc02862 0.16 -0.3 216,019 - SMc02862 0.16 -0.6 216,765 + -0.1 216,766 - +0.2 216,766 - +1.0 216,848 + -0.3 216,848 + -0.6 216,848 + -0.9 216,848 + +0.9 216,848 + -0.4 216,849 - +1.1 216,849 - +0.9 216,849 - +1.6 216,849 - +1.9 217,157 - SMc02863 0.32 +0.7 217,536 - SMc02863 0.66 -0.9
Or see this region's nucleotide sequence