Strain Fitness in Sinorhizobium meliloti 1021 around SMc02571

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,199,495	-		SMc02661	0.41	-0.5
1,199,506	+		SMc02661	0.41	+0.3
1,199,507	-		SMc02661	0.41	+1.1
1,199,542	+		SMc02661	0.44	+0.3
1,199,543	-		SMc02661	0.44	+0.3
1,199,571	+		SMc02661	0.45	-0.1
1,199,589	+		SMc02661	0.46	+1.5
1,199,590	-		SMc02661	0.46	+0.7
1,199,752	-		SMc02661	0.56	+0.0
1,199,760	+		SMc02661	0.56	+0.7
1,199,786	-		SMc02661	0.58	-0.2
1,199,841	+		SMc02661	0.61	+0.7
1,199,852	+		SMc02661	0.62	+0.0
1,199,872	+		SMc02661	0.63	-1.0
1,199,873	-		SMc02661	0.63	+0.4
1,199,873	-		SMc02661	0.63	-0.1
1,199,947	+		SMc02661	0.68	-0.0
1,199,948	-		SMc02661	0.68	+0.4
1,199,963	-		SMc02661	0.69	+0.1
1,199,975	+		SMc02661	0.69	+0.1
1,200,013	+		SMc02661	0.72	-0.4
1,200,013	+		SMc02661	0.72	-0.3
1,200,026	+		SMc02661	0.72	-0.8
1,200,026	+		SMc02661	0.72	+0.2
1,200,027	-		SMc02661	0.72	-0.3
1,200,055	+		SMc02661	0.74	+1.2
1,200,055	+		SMc02661	0.74	+0.1
1,200,060	-		SMc02661	0.74	-0.7
1,200,081	+		SMc02661	0.76	-0.4
1,200,204	+		SMc02661	0.83	-0.4
1,200,233	+		SMc02661	0.85	+0.3
1,200,234	-		SMc02661	0.85	-0.3
1,200,365	-				-1.2
1,200,394	+				+0.9
1,200,394	+				+0.1
1,200,488	+				+0.6
1,200,488	+				+0.7
1,200,488	+				-0.9
1,200,488	+				-2.6
1,200,489	-				-0.1
1,200,489	-				+0.1
1,200,489	-				-0.5
1,200,489	-				-0.1
1,200,489	-				-0.9
1,200,491	+				-0.3
1,200,491	+				+0.8
1,200,491	+				-0.4
1,200,492	-				-1.4
1,200,539	-				+0.5
1,200,588	+				-0.1
1,200,607	+				+0.5
1,200,608	-				+0.8
1,200,608	-				-0.5
1,200,685	+		SMc02571	0.15	-1.4
1,200,685	+		SMc02571	0.15	-0.9
1,200,685	+		SMc02571	0.15	+0.1
1,200,685	+		SMc02571	0.15	+0.5
1,200,686	-		SMc02571	0.15	+0.8
1,200,686	-		SMc02571	0.15	+5.9
1,200,734	-		SMc02571	0.18	-0.5
1,200,734	-		SMc02571	0.18	-0.2
1,200,944	+		SMc02571	0.34	-0.4
1,200,944	+		SMc02571	0.34	-0.5
1,200,944	+		SMc02571	0.34	-1.1
1,200,944	+		SMc02571	0.34	-0.1
1,200,944	+		SMc02571	0.34	+0.1
1,200,944	+		SMc02571	0.34	+0.3
1,200,945	-		SMc02571	0.34	-1.5
1,200,945	-		SMc02571	0.34	-2.2
1,200,945	-		SMc02571	0.34	+0.4
1,200,946	+		SMc02571	0.34	+0.4
1,200,946	+		SMc02571	0.34	-0.4
1,200,958	+		SMc02571	0.35	-0.0
1,200,958	+		SMc02571	0.35	+1.9
1,200,959	-		SMc02571	0.35	-0.4
1,200,959	-		SMc02571	0.35	+0.1
1,201,068	-		SMc02571	0.44	+0.5
1,201,134	+		SMc02571	0.49	+0.5
1,201,135	-		SMc02571	0.49	+0.8
1,201,203	-		SMc02571	0.54	-0.2
1,201,203	-		SMc02571	0.54	+0.5
1,201,232	+		SMc02571	0.56	-0.0
1,201,233	-		SMc02571	0.56	-1.2
1,201,272	+		SMc02571	0.59	+0.1
1,201,273	-		SMc02571	0.59	+2.2
1,201,406	+		SMc02571	0.69	-0.2
1,201,406	+		SMc02571	0.69	+0.9
1,201,407	-		SMc02571	0.69	+0.5
1,201,407	-		SMc02571	0.69	-0.4
1,201,453	+		SMc02571	0.73	+0.1
1,201,454	-		SMc02571	0.73	+0.5
1,201,454	-		SMc02571	0.73	-1.4
1,201,592	+		SMc02571	0.83	+0.1
1,201,641	+		SMc02571	0.87	+1.0
1,201,641	+		SMc02571	0.87	-0.7
1,201,696	+				-0.0
1,201,696	+				+0.9
1,201,696	+				-0.1
1,201,697	-				+0.3
1,201,757	+				+0.3
1,201,757	+				+0.2
1,201,758	-				+0.3
1,201,758	-				-0.0
1,201,758	-				-0.5
1,201,778	-				-1.7
1,201,801	+				-0.2
1,201,892	+		SMc02660	0.16	+0.6
1,201,917	+		SMc02660	0.21	-0.6
1,201,918	-		SMc02660	0.21	+0.3
1,201,918	-		SMc02660	0.21	+0.7
1,201,932	+		SMc02660	0.24	+0.1
1,201,932	+		SMc02660	0.24	+0.2
1,201,933	-		SMc02660	0.24	+0.1
1,202,125	+		SMc02660	0.63	-0.2
1,202,127	+		SMc02660	0.63	-0.1
1,202,128	-		SMc02660	0.64	-0.2
1,202,186	+		SMc02660	0.75	-0.8
1,202,186	+		SMc02660	0.75	-2.4
1,202,187	-		SMc02660	0.76	-0.2
1,202,219	-		SMc02660	0.82	-0.2
1,202,332	-				+0.2
1,202,340	-				+0.2
1,202,340	-				-1.2
1,202,355	+				+0.1
1,202,356	-				+1.2
1,202,384	+				+1.3
1,202,384	+				-0.2
1,202,393	+				-0.7
1,202,394	-				+0.0
1,202,394	-				-0.2
1,202,394	-				+0.6
1,202,395	+				-0.1
1,202,396	-				+0.3
1,202,461	+				+0.2