Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02511 and SMc02510 are separated by 6 nucleotides SMc02510 and SMc02509 are separated by 121 nucleotides
SMc02511: SMc02511 - hypothetical protein, at 3,282,467 to 3,283,372
SMc02511
SMc02510: SMc02510 - ferric uptake regulation protein, at 3,283,379 to 3,283,807
SMc02510
SMc02509: SMc02509 - iron-binding periplasmic ABC transporter protein, at 3,283,929 to 3,284,834
SMc02509
Position (kb)
3283
3284 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3282.426 kb on - strand at 3282.426 kb on - strand at 3282.536 kb on + strand at 3282.537 kb on - strand at 3282.965 kb on + strand, within SMc02511 at 3282.982 kb on - strand, within SMc02511 at 3283.169 kb on + strand, within SMc02511 at 3283.170 kb on - strand, within SMc02511 at 3283.220 kb on + strand, within SMc02511 at 3283.220 kb on + strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.221 kb on - strand, within SMc02511 at 3283.258 kb on - strand, within SMc02511 at 3283.258 kb on - strand, within SMc02511 at 3283.339 kb on + strand at 3283.340 kb on - strand at 3283.402 kb on - strand at 3283.624 kb on - strand, within SMc02510 at 3283.904 kb on + strand at 3283.904 kb on + strand at 3283.904 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,282,426 - -0.2 3,282,426 - +0.2 3,282,536 + +0.0 3,282,537 - -0.4 3,282,965 + SMc02511 0.55 -1.4 3,282,982 - SMc02511 0.57 +2.0 3,283,169 + SMc02511 0.77 -1.0 3,283,170 - SMc02511 0.78 +0.1 3,283,220 + SMc02511 0.83 +0.0 3,283,220 + SMc02511 0.83 +1.1 3,283,221 - SMc02511 0.83 +0.5 3,283,221 - SMc02511 0.83 +0.8 3,283,221 - SMc02511 0.83 -0.4 3,283,221 - SMc02511 0.83 +0.5 3,283,221 - SMc02511 0.83 +0.6 3,283,221 - SMc02511 0.83 -3.0 3,283,258 - SMc02511 0.87 +0.1 3,283,258 - SMc02511 0.87 -0.9 3,283,339 + +0.2 3,283,340 - +0.1 3,283,402 - -2.1 3,283,624 - SMc02510 0.57 -2.2 3,283,904 + -0.4 3,283,904 + -0.2 3,283,904 + -0.6
Or see this region's nucleotide sequence