Strain Fitness in Sinorhizobium meliloti 1021 around SMc01588

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,386,474	+		SMc01582	0.15	-0.3
2,386,481	-		SMc01582	0.16	-0.1
2,386,481	-		SMc01582	0.16	-0.1
2,386,514	-		SMc01582	0.19	-0.8
2,386,612	+		SMc01582	0.27	+0.3
2,386,613	-		SMc01582	0.27	-0.5
2,386,613	-		SMc01582	0.27	-0.3
2,386,613	-		SMc01582	0.27	+1.0
2,386,733	+		SMc01582	0.38	-2.2
2,386,733	+		SMc01582	0.38	+0.4
2,386,735	+		SMc01582	0.38	-0.3
2,386,736	-		SMc01582	0.38	-1.7
2,386,804	+		SMc01582	0.44	+0.3
2,386,804	+		SMc01582	0.44	-0.8
2,386,804	+		SMc01582	0.44	+1.9
2,386,804	+		SMc01582	0.44	-0.1
2,386,805	-		SMc01582	0.44	+0.1
2,386,805	-		SMc01582	0.44	+1.0
2,386,805	-		SMc01582	0.44	-0.4
2,386,820	-		SMc01582	0.45	-0.2
2,387,283	-		SMc01582	0.86	-0.4
2,387,466	+				+0.1
2,387,466	+				-1.4
2,387,565	+				-0.3
2,387,565	+				+0.0
2,387,566	-				-0.2
2,387,681	+		SMc01588	0.17	+0.9
2,387,682	-		SMc01588	0.17	-0.8
2,387,714	-		SMc01588	0.20	+0.5
2,387,959	-		SMc01588	0.37	-0.7
2,387,959	-		SMc01588	0.37	-1.6
2,387,959	-		SMc01588	0.37	-0.4
2,388,000	+		SMc01588	0.40	+0.0
2,388,001	-		SMc01588	0.40	+0.2
2,388,018	+		SMc01588	0.42	+0.1
2,388,018	+		SMc01588	0.42	+0.8
2,388,018	+		SMc01588	0.42	+0.0
2,388,018	+		SMc01588	0.42	+0.2
2,388,018	+		SMc01588	0.42	+0.0
2,388,018	+		SMc01588	0.42	+1.9
2,388,018	+		SMc01588	0.42	+0.1
2,388,018	+		SMc01588	0.42	-0.2
2,388,019	-		SMc01588	0.42	+1.0
2,388,058	-				-0.1
2,388,117	+		SMc01588	0.49	-0.3
2,388,311	+		SMc01588	0.63	-1.2
2,388,376	+		SMc01588	0.67	+0.1
2,388,377	-		SMc01588	0.68	+0.5
2,388,421	+		SMc01588	0.71	-0.6
2,388,421	+		SMc01588	0.71	+0.2
2,388,421	+		SMc01588	0.71	-0.1
2,388,422	-		SMc01588	0.71	-0.9
2,388,422	-		SMc01588	0.71	+0.0
2,388,422	-		SMc01588	0.71	+0.6
2,388,423	+		SMc01588	0.71	+1.0
2,388,423	+		SMc01588	0.71	-0.3
2,388,423	+		SMc01588	0.71	-1.3
2,388,423	+				+1.6
2,388,423	+		SMc01588	0.71	-0.1
2,388,423	+		SMc01588	0.71	-0.8
2,388,424	-		SMc01588	0.71	-0.7
2,388,424	-		SMc01588	0.71	-0.0
2,388,424	-		SMc01588	0.71	-1.5
2,388,424	-		SMc01588	0.71	+0.2
2,388,424	-		SMc01588	0.71	+0.4
2,388,424	-		SMc01588	0.71	+0.1
2,388,424	-		SMc01588	0.71	-0.4
2,388,429	+		SMc01588	0.71	+0.8
2,388,429	+		SMc01588	0.71	-0.8
2,388,545	+		SMc01588	0.80	-0.0
2,388,545	+		SMc01588	0.80	+0.2
2,388,546	-		SMc01588	0.80	+0.1
2,388,550	-		SMc01588	0.80	+0.7
2,388,588	+		SMc01588	0.83	-1.3
2,388,589	-		SMc01588	0.83	-0.0
2,388,765	-				-0.7
2,388,783	+				-2.0
2,388,783	+				+0.3
2,388,894	-				-0.8
2,388,933	+				+0.1
2,388,933	+				-0.0
2,388,971	+				-0.4
2,389,109	+				-0.6
2,389,110	-				+0.0
2,389,110	-				+0.1
2,389,110	-				-0.4
2,389,110	-				+1.1
2,389,110	-				+0.6
2,389,110	-				+1.0
2,389,117	+				-1.7
2,389,118	-				+0.3
2,389,188	+		SMc01594	0.12	-1.9
2,389,189	-		SMc01594	0.12	+0.4
2,389,220	+		SMc01594	0.14	+0.2
2,389,307	+		SMc01594	0.21	+0.3
2,389,432	-		SMc01594	0.30	-0.7
2,389,451	+		SMc01594	0.31	+0.2
2,389,451	+		SMc01594	0.31	-0.8
2,389,461	+		SMc01594	0.32	+0.1
2,389,461	+		SMc01594	0.32	+0.4
2,389,464	-		SMc01594	0.32	-0.9
2,389,479	-		SMc01594	0.33	-0.8
2,389,479	-		SMc01594	0.33	+0.1
2,389,517	+		SMc01594	0.36	-0.4
2,389,518	-		SMc01594	0.36	+0.2
2,389,518	-		SMc01594	0.36	+0.6
2,389,544	+		SMc01594	0.38	+0.3
2,389,544	+		SMc01594	0.38	-0.1
2,389,545	-		SMc01594	0.38	-0.3
2,389,545	-		SMc01594	0.38	+0.5
2,389,635	-		SMc01594	0.45	-0.2
2,389,635	-		SMc01594	0.45	-0.2
2,389,635	-		SMc01594	0.45	-0.5