Strain Fitness in Sinorhizobium meliloti 1021 around SMc01488

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,246,771	-		SMc01405	0.11	-0.0
2,246,773	+		SMc01405	0.11	-0.2
2,246,774	-		SMc01405	0.11	-0.0
2,246,774	-		SMc01405	0.11	-0.3
2,246,810	+		SMc01405	0.15	+0.4
2,246,811	-		SMc01405	0.15	+0.0
2,246,895	+		SMc01405	0.25	-1.2
2,247,000	-		SMc01405	0.37	+0.6
2,247,001	+		SMc01405	0.37	+0.0
2,247,001	+		SMc01405	0.37	+0.3
2,247,001	+		SMc01405	0.37	-2.7
2,247,002	-		SMc01405	0.37	+1.0
2,247,002	-		SMc01405	0.37	+0.0
2,247,092	+		SMc01405	0.47	+0.1
2,247,120	+		SMc01405	0.50	-0.0
2,247,194	-		SMc01405	0.58	-1.1
2,247,272	+		SMc01405	0.67	+0.5
2,247,272	+		SMc01405	0.67	+1.5
2,247,272	+		SMc01405	0.67	-0.7
2,247,273	-		SMc01405	0.67	-0.5
2,247,273	-		SMc01405	0.67	-0.2
2,247,273	-		SMc01405	0.67	-0.3
2,247,273	-		SMc01405	0.67	-0.5
2,247,273	-		SMc01405	0.67	+2.7
2,247,475	-				-0.3
2,247,566	+				-0.7
2,247,566	+				-0.3
2,247,566	+				+0.5
2,247,566	+				+0.9
2,247,566	+				-2.4
2,247,567	-				-1.0
2,247,567	-				+0.9
2,247,719	+		SMc01488	0.16	+0.5
2,247,720	-		SMc01488	0.16	+0.9
2,247,726	-		SMc01488	0.17	+0.2
2,247,831	-				+0.9
2,247,926	+		SMc01488	0.57	+0.2
2,247,926	+		SMc01488	0.57	+0.9
2,247,926	+		SMc01488	0.57	-1.1
2,247,926	+		SMc01488	0.57	-1.4
2,247,926	+		SMc01488	0.57	+0.1
2,247,927	-		SMc01488	0.58	+0.6
2,247,981	+		SMc01488	0.68	+0.7
2,247,981	+		SMc01488	0.68	+0.2
2,247,981	+		SMc01488	0.68	+0.1
2,247,982	-		SMc01488	0.69	-0.2
2,247,982	-		SMc01488	0.69	+0.1
2,247,982	-		SMc01488	0.69	+2.3
2,247,982	-		SMc01488	0.69	-0.3
2,247,982	-		SMc01488	0.69	-0.3
2,248,241	+				-0.7
2,248,264	-				+1.3
2,248,311	+				-0.5
2,248,747	+		SMc01406	0.35	+1.0
2,248,747	+		SMc01406	0.35	-0.4
2,248,928	+		SMc01406	0.48	+0.2
2,248,946	+		SMc01406	0.49	-1.8
2,248,947	-				-0.5
2,249,025	+		SMc01406	0.55	-2.8
2,249,025	+		SMc01406	0.55	+0.1
2,249,025	+		SMc01406	0.55	+0.4
2,249,025	+		SMc01406	0.55	+0.1
2,249,026	-		SMc01406	0.55	-0.8
2,249,054	+		SMc01406	0.57	-0.3
2,249,055	-		SMc01406	0.57	+0.0
2,249,058	+		SMc01406	0.57	+0.7
2,249,058	+		SMc01406	0.57	-0.2
2,249,058	+		SMc01406	0.57	-2.4
2,249,058	+		SMc01406	0.57	+0.1
2,249,058	+		SMc01406	0.57	+0.3
2,249,059	-		SMc01406	0.57	+0.0
2,249,059	-		SMc01406	0.57	-0.0
2,249,059	-		SMc01406	0.57	-0.9
2,249,137	-		SMc01406	0.63	-1.0