Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00740 and SMc00739 overlap by 1 nucleotides SMc00739 and SMc00759 are separated by 61 nucleotides SMc00759 and SMc00738 are separated by 318 nucleotides SMc00738 and SMc00737 are separated by 31 nucleotides
SMc00740: SMc00740 - hypothetical protein, at 2,842,713 to 2,842,997
SMc00740
SMc00739: SMc00739 - hypothetical protein, at 2,842,997 to 2,843,479
SMc00739
SMc00759: SMc00759 - tRNA-Leu, at 2,843,541 to 2,843,625
SMc00759
SMc00738: SMc00738 - hypothetical protein, at 2,843,944 to 2,844,453
SMc00738
SMc00737: SMc00737 - hypothetical protein, at 2,844,485 to 2,845,042
SMc00737
Position (kb)
2843
2844 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2842.542 kb on + strand at 2842.543 kb on - strand at 2842.673 kb on + strand at 2842.682 kb on - strand at 2842.686 kb on + strand at 2842.687 kb on - strand at 2842.687 kb on - strand at 2842.687 kb on - strand at 2842.777 kb on + strand, within SMc00740 at 2842.777 kb on + strand, within SMc00740 at 2842.778 kb on - strand, within SMc00740 at 2842.778 kb on - strand, within SMc00740 at 2842.918 kb on - strand, within SMc00740 at 2842.918 kb on - strand, within SMc00740 at 2843.037 kb on + strand at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.126 kb on + strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.127 kb on - strand, within SMc00739 at 2843.132 kb on - strand, within SMc00739 at 2843.162 kb on + strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.163 kb on - strand, within SMc00739 at 2843.264 kb on - strand, within SMc00739 at 2843.770 kb on + strand at 2843.771 kb on - strand at 2843.850 kb on + strand at 2843.871 kb on + strand at 2843.871 kb on + strand at 2843.871 kb on + strand at 2844.451 kb on + strand at 2844.487 kb on - strand at 2844.516 kb on + strand at 2844.517 kb on - strand at 2844.566 kb on - strand, within SMc00737 at 2844.594 kb on + strand, within SMc00737 at 2844.595 kb on - strand, within SMc00737 at 2844.597 kb on - strand, within SMc00737
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,842,542 + +0.6 2,842,543 - +0.7 2,842,673 + -1.1 2,842,682 - +0.5 2,842,686 + -0.2 2,842,687 - +0.7 2,842,687 - +0.3 2,842,687 - -2.1 2,842,777 + SMc00740 0.22 +1.4 2,842,777 + SMc00740 0.22 +0.6 2,842,778 - SMc00740 0.23 -0.1 2,842,778 - SMc00740 0.23 -0.3 2,842,918 - SMc00740 0.72 +1.0 2,842,918 - SMc00740 0.72 -0.0 2,843,037 + +0.4 2,843,126 + SMc00739 0.27 -0.1 2,843,126 + SMc00739 0.27 -0.4 2,843,126 + SMc00739 0.27 -0.8 2,843,126 + SMc00739 0.27 -0.3 2,843,126 + SMc00739 0.27 -2.2 2,843,126 + SMc00739 0.27 -0.5 2,843,127 - SMc00739 0.27 -0.1 2,843,127 - SMc00739 0.27 -0.1 2,843,132 - SMc00739 0.28 +0.2 2,843,162 + SMc00739 0.34 -0.0 2,843,163 - SMc00739 0.34 +1.2 2,843,163 - SMc00739 0.34 +0.6 2,843,264 - SMc00739 0.55 +0.2 2,843,770 + +2.3 2,843,771 - +1.3 2,843,850 + +0.3 2,843,871 + +0.1 2,843,871 + -0.8 2,843,871 + +0.6 2,844,451 + +1.7 2,844,487 - +1.4 2,844,516 + +1.6 2,844,517 - -0.6 2,844,566 - SMc00737 0.15 +1.3 2,844,594 + SMc00737 0.20 +0.6 2,844,595 - SMc00737 0.20 +0.8 2,844,597 - SMc00737 0.20 +0.9
Or see this region's nucleotide sequence