Strain Fitness in Sinorhizobium meliloti 1021 around SMc00729
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,849,751 | + | SMc00730 | 0.19 | -0.4 | |
2,849,751 | + | SMc00730 | 0.19 | +0.7 | |
2,849,751 | + | SMc00730 | 0.19 | +0.0 | |
2,849,756 | + | +2.6 | |||
2,849,756 | + | SMc00730 | 0.19 | -0.6 | |
2,849,756 | + | SMc00730 | 0.19 | +0.4 | |
2,849,757 | - | SMc00730 | 0.19 | +0.4 | |
2,849,757 | - | SMc00730 | 0.19 | +0.7 | |
2,849,757 | - | SMc00730 | 0.19 | -0.7 | |
2,849,757 | - | SMc00730 | 0.19 | -0.5 | |
2,849,757 | - | SMc00730 | 0.19 | +0.8 | |
2,849,759 | - | SMc00730 | 0.20 | -0.4 | |
2,849,759 | - | SMc00730 | 0.20 | +1.2 | |
2,849,781 | - | SMc00730 | 0.22 | +0.1 | |
2,849,837 | + | SMc00730 | 0.30 | -0.7 | |
2,849,837 | + | SMc00730 | 0.30 | -0.3 | |
2,849,838 | - | SMc00730 | 0.30 | -1.0 | |
2,849,838 | - | SMc00730 | 0.30 | +0.6 | |
2,849,948 | + | SMc00730 | 0.44 | +1.0 | |
2,849,948 | + | SMc00730 | 0.44 | +0.4 | |
2,849,949 | - | SMc00730 | 0.44 | +0.3 | |
2,849,949 | - | SMc00730 | 0.44 | +0.1 | |
2,849,949 | - | SMc00730 | 0.44 | +0.2 | |
2,849,949 | - | SMc00730 | 0.44 | +2.2 | |
2,850,530 | + | -2.8 | |||
2,850,577 | + | -0.0 | |||
2,850,651 | + | +1.1 |
Or see this region's nucleotide sequence